Tsin001972.1
Basic Information
- Insect
- Torymus sinensis
- Gene Symbol
- ZBTB41
- Assembly
- GCA_030522985.1
- Location
- JAPYZP010000723.1:17593-20412[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0022 0.5 12.8 0.2 1 23 22 44 22 44 0.96 2 22 1e-05 0.0023 20.1 4.8 1 23 50 72 50 72 0.98 3 22 2.1e-06 0.00048 22.3 0.1 1 23 78 100 78 100 0.98 4 22 0.00027 0.061 15.6 1.3 3 23 108 129 106 129 0.96 5 22 4e-05 0.0092 18.2 3.5 1 23 134 156 134 156 0.97 6 22 2.5e-05 0.0057 18.9 1.9 1 23 165 187 165 187 0.98 7 22 1.3e-05 0.0029 19.8 0.5 1 23 193 215 193 215 0.97 8 22 3.2e-05 0.0074 18.5 1.2 2 23 222 243 221 243 0.97 9 22 4.6e-06 0.0011 21.2 1.6 1 23 249 271 249 271 0.98 10 22 0.00018 0.041 16.2 0.6 1 23 277 300 277 300 0.95 11 22 0.29 68 6.1 0.1 1 23 407 430 407 430 0.92 12 22 0.00015 0.034 16.5 3.7 1 23 439 461 439 461 0.97 13 22 5.1e-06 0.0012 21.0 6.1 1 23 485 507 485 507 0.99 14 22 0.00033 0.076 15.3 3.7 3 23 514 534 512 534 0.97 15 22 0.0004 0.091 15.1 0.2 1 23 539 561 539 561 0.98 16 22 1.4e-06 0.00033 22.8 0.7 1 23 569 591 569 591 0.98 17 22 0.38 87 5.7 1.7 1 23 597 620 597 620 0.94 18 22 0.00028 0.064 15.6 0.3 3 23 633 653 631 653 0.96 19 22 7.9e-06 0.0018 20.4 2.0 1 23 659 681 659 681 0.96 20 22 4.1e-08 9.4e-06 27.6 0.2 1 23 687 709 687 709 0.98 21 22 3.2e-07 7.3e-05 24.8 0.9 1 23 715 737 715 737 0.98 22 22 0.00072 0.17 14.3 1.7 1 21 743 763 743 764 0.96
Sequence Information
- Coding Sequence
- ATGAACTCACCCGCAATCGATAACCCACGAGAGAATCCCGAATCGAGCAACGAAGATGGTACCTACCAATGTCCGCTCTGTCCGCGGCGTCTGCGCACGAAGAACCTGTTCGAGGGCCACCTGATAGCCCACAGCGACGCGCGACCTCACCGCTGCGACGTCTGTCACAAGAGCTTCAAGCGTAGCAACACTCTCGCGGTGCACCGTCGCATCCACAGCTCGCAGCGCAACTTCGTCTGCGACGCGTGCGGCCGTGCCTTCGTGCAGGCCTCCCAGCTCGCCACGCATCAGCGACGGCACTTGGAGAAGTACACAAAGCACTGCGACGTGTGCAACAAAGGTTTCTTCACGAACGCGGAGCTGAGAGGACACATGAACGTGAGGCACGGCGCTAGGGAGCACGTGTGCAAGGATTGCGGCAGGAGCTTTCCGAACAATCACTCGCTGCGGGGCCACAGCAAGAGCCACGAGCCGGATTTCGAGCCGACGAAGCACCAGTGCGAGTTCTGCGGCAAGACCTTTGCCTTCAAGAACTCCCTGGTGGTGCACGTGAAGAGCCACACGGGCGAGAACAAGTACGACTGTCACTTGTGCGGCAAGTCAGTCGCGTCGAGAGGCTCGCTGCAGGATCATCTGAGGCTGCACAACAGTGAGAAAAGCCTCGTGTGCGATGTGTGCGGCAAGGCCTTTCACAAGAGAACGACCCTCGTGGTGCACAGGAGGACGCACACGGGGGAGAAACCGTACGTTTGCGAGTCGTGCGGAAAGGCGTTCACCCAGCACTCGACGTTGGTGATACACAGGCGATATCATACAGGACAGAGACCTTATCAGTGCGCCACGTGCAACAAGTCCTTCGTATCGAGAGCGATGCTCAATGGGCACAAAAACCTTACGCACAGCCTTGACTCAGCCGACGGTTTTCTTTCACGTTACAGATTCGCCTATCCCGAGTGCTATTACCCGCTGACGGTCCTTGGCGACAAGGAGACCAACGGCGAGGTGGCAACGATGGACTCAGCCTCCTCTTCGCCCGTGATGTTCACAAAGAAGAAGCAGCAGATGCGCAAGCTCGAGAGTAGCACATGTGcggaacaacaacaacaacccaTCGTTGTCGTCAAAGTCGAGGAATCACATGCTACGAACGAcgacgaggaagaagaggaggaagaggaggaggaggaggaggaggaggaggaggatctACCACTGGCCTACTATTGCAAACCCTGCGGCATGCTCTTCGCGTCGCAGAATCTACTGGTCGAGCACTCCGCGATGCAACATAAGATTGCCACGGCGAAGAGGAGGTTCGATTGCGCGCACTGCGGCAAGGTATGCCGCACGGCTCTGAGCCTACGCCAGCACTTGAAACGCCACAAGGACGCCGTCAGTGCGAAGGAGGACGAAGACGAGGCGGACGAGGGTGATGAGAAGTTAGAACATGAGTACACGTGCAAGACGTGCGGCAAGCTGTTCAGGCACAAGAGCAACTACCAGAAACACTTGATGCGCCATACAGTGGGCGACCTCGCGTGCAAGCACTGCCCAAAGAAGTTCCGACTGTTCAGAGACCTGACGAGGCACGAGAAGACGCACTTTCTGCCGAGCTACACGTGCAAAGAGTGCGACTACGAGACGACGGTACTCGCTGCCCTCACGATTCACATGACCAGGCACACAGATAAGACTGACCTACCGTTCAAGTGCAGCGAGTGCGACAAGAGGTTCAGAAAAGCCGCCGAACTCCAGGAACACTACAACATACATTCCGGCGACAAGCCGTTCGTCTGTCAAGTGTGCTCGGCCGCGTTCTTCCTGAGGCGGCAGTTGTCCGCGCACTGCAGGAGGCTACATCCCGAGCTGAAGGCGCCGAAGGTCACGAGCACCGCCTGCGACATCTGCGGTCGTGTTCTCGCCACGAAGCGCTCGCTGTTCCGGCACAAGGAGAGCCACAATCCGACGAAACTCTACCTCTGCGATTTTTGCGGCAAGAGCCTCAGCAGCGCGGAACATCTGAAGAAACACAGGAGGATACATACAGGCGAGAAACCCTACGTCTGTGATATATGCGGCAAGGGATTCACTGACTCGGAGAACCTCAGGATGCATCGACGCGTGCATACTGGTGAAAAGCCGTACAAGTGCGATCAGTGCCCGAAAGCCTTCAGCCAGAGGTCGACTCTGACGATACACAGGAGGGGACACACGGGGGAGAGGCCGTATGTGTGTCAGATATGCCATCGTGGATTCTCGTGCCAGGGAAACCTGACCGCACATCAGAAGTCCACGTGTGTCTGA
- Protein Sequence
- MNSPAIDNPRENPESSNEDGTYQCPLCPRRLRTKNLFEGHLIAHSDARPHRCDVCHKSFKRSNTLAVHRRIHSSQRNFVCDACGRAFVQASQLATHQRRHLEKYTKHCDVCNKGFFTNAELRGHMNVRHGAREHVCKDCGRSFPNNHSLRGHSKSHEPDFEPTKHQCEFCGKTFAFKNSLVVHVKSHTGENKYDCHLCGKSVASRGSLQDHLRLHNSEKSLVCDVCGKAFHKRTTLVVHRRTHTGEKPYVCESCGKAFTQHSTLVIHRRYHTGQRPYQCATCNKSFVSRAMLNGHKNLTHSLDSADGFLSRYRFAYPECYYPLTVLGDKETNGEVATMDSASSSPVMFTKKKQQMRKLESSTCAEQQQQPIVVVKVEESHATNDDEEEEEEEEEEEEEEEEDLPLAYYCKPCGMLFASQNLLVEHSAMQHKIATAKRRFDCAHCGKVCRTALSLRQHLKRHKDAVSAKEDEDEADEGDEKLEHEYTCKTCGKLFRHKSNYQKHLMRHTVGDLACKHCPKKFRLFRDLTRHEKTHFLPSYTCKECDYETTVLAALTIHMTRHTDKTDLPFKCSECDKRFRKAAELQEHYNIHSGDKPFVCQVCSAAFFLRRQLSAHCRRLHPELKAPKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDFCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICHRGFSCQGNLTAHQKSTCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01466503;
- 90% Identity
- iTF_01466503;
- 80% Identity
- -