Basic Information

Gene Symbol
cdc5l
Assembly
GCA_030522985.1
Location
JAPYZP010086842.1:60-510[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-18 1.7e-14 55.5 1.5 2 46 9 54 8 54 0.97
2 2 2.1e-13 6.6e-10 40.8 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGAGGATTATGATAAAAGGCGGCGTTTGGCGCAACACCGAGGATGAAATCCTTAAAGCAGCTGTGATGAAATATGGTAAGAACCAATGGAGTCGAATCGCTTCCCTTCTCCACAGGAAATCTGCCAAACAATGCAAAGCTCGATGGTTCGAATGGCTGGACCCAAGTATCAAAAAGACCGAATGGAGCAGAGAAGAAGACGAAAAGCTTTTGCACTTGGCCAAGCTAATGCCAACACAATGGCGCACAATAGCACCCATTATTGGCCGGACAGCAGCCCAATGTTTAGAGCGTTACGAGTATTTGCTGTAA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01536081;
90% Identity
iTF_01536081;
80% Identity
iTF_01536081;