Tsin031641.2
Basic Information
- Insect
- Torymus sinensis
- Gene Symbol
- Lcp65Ag1
- Assembly
- GCA_030522985.1
- Location
- JAPYZP010038140.1:60-2558[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-08 3.2e-05 25.4 0.0 3 35 17 50 15 55 0.90
Sequence Information
- Coding Sequence
- atggtAAGATTATATAAAACAGAGACTGATAGGAGTAGTTGGAATGACGGTGACATGCATTTAGCCATCAAAAGTGTACTGGAGGATGGGAAGAGCTGCAAAAGTGCAGCACAAGAATTTAATGTACCGCGATCCACTcttcagaaaaaaatcaaaataatgaatgatcCCAAAAAagGGTTCAGTCCTACGTTTAgtgacgaaaaagaaaaagcgtTTGTGCAGTACATAACTGACATGGAGTACCAGTTACTAGGGCTGACATCATTAGATGATAGAACGATCATTAACATTGTTAATATCGCCTCTTTTAAACcATTTCAATAtgctgaaaaattgaaaattgctcATAACTTCAATCACAACACAgAGCTTGCAGGAAAAGATTGGCTCCAGAGCTTTATGAGTCGACATGATCTTGCTCATAGGAAGGCAGAGCACACTTCTGCTGCTAGAGCTCATGGCTTCAATGAAGAAGCTGTTAGAgagtttttcaatttattaaaaggCCTTTTGGATAAATACGCCTTCCCACCTGAAAAGATTTTCAATGTTGATGAGACTGGCATCTCTGTAGTCCCAAAATTCTCTCCAAAAGTAATAGCaaaaaggggaaaaaaacaaGTTGGAGGAAAGACCGTTGCTGCACGTGGAGAGACAGTTACTGCTGAAATCTGCATGTCAGCAGCAGGTGCATTTATGCCACCAATGCGGATCTTTCCTCCAGTGaaagaaaatccaaaattaCTACACGATGCACCACCTGGAGCATGGGCCGAGTTCCACAAAACTGGTTACATGCAGACAGATATCTTTGCAAGCTggtttcttaaatttattagattttctgGAGCAATACTAGATAGTCCAGTACTGGATGGACTACTGCTACTGGATGGACATATTGCAGTTTTCGTTGCCCTCGTGGCTGTTGCTGTCGCTGCTCCCACGAAGGACGCCCCGGAGGTCGTAGTCGTGAAAGAGACTCTCTATGACACCGTTGGTACCGATGGATACAAATTCGACTATCAACTGAGCGATGGATCCTCCCGTTATGAATCTGCCCAGATTGAGATGAGAGGACCTGAGGATGCTGTTCTCCGCGTCAGTGGATCCTACAACTACGTTGGCGATGACGGCGTGACCTACACTGTCACATACATAGCCGATGAAAATGGCTTCCAGCCTCACGGCGCCCATATCCCCGTTGCTCCTCAAGCTTAG
- Protein Sequence
- MVRLYKTETDRSSWNDGDMHLAIKSVLEDGKSCKSAAQEFNVPRSTLQKKIKIMNDPKKGFSPTFSDEKEKAFVQYITDMEYQLLGLTSLDDRTIINIVNIASFKPFQYAEKLKIAHNFNHNTELAGKDWLQSFMSRHDLAHRKAEHTSAARAHGFNEEAVREFFNLLKGLLDKYAFPPEKIFNVDETGISVVPKFSPKVIAKRGKKQVGGKTVAARGETVTAEICMSAAGAFMPPMRIFPPVKENPKLLHDAPPGAWAEFHKTGYMQTDIFASWFLKFIRFSGAILDSPVLDGLLLLDGHIAVFVALVAVAVAAPTKDAPEVVVVKETLYDTVGTDGYKFDYQLSDGSSRYESAQIEMRGPEDAVLRVSGSYNYVGDDGVTYTVTYIADENGFQPHGAHIPVAPQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -