Tsin048128.1
Basic Information
- Insect
- Torymus sinensis
- Gene Symbol
- -
- Assembly
- GCA_030522985.1
- Location
- JAPYZP010102279.1:1-969[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-10 3.8e-07 31.6 0.0 1 39 3 40 3 44 0.91 2 2 6.4 7.6e+03 -1.4 0.1 29 43 122 136 121 138 0.83
Sequence Information
- Coding Sequence
- AGCTGGACTGATGGACAGATGCAATTAGCTCTTGATAGTGTTTTGCAAGGTAAAAGTTGTAAAACTGCTGCAAGTGAATTTGGAGTACCCAGAACTACTTTACAGGACagattaaaattgattaacaaTCCTTTGCACAACCAGAACAGTATTAAAACAGCTGTAGGATTTACTCGTGTGTTTGATCGTGATCAAGAAGCAGCTCTAGCTGCTTATATCAATGACATGGAACTTCGTTTGATAGGACTTTCAGCATTAGACGTAAGGCGACTAGCCTTTGAGTTTGCTGAGAAACTTAGAATTCCACACAACTTTAACagagaaaaaaAACTTGCTGGCACAGATTGGCTAACAGGGTTTCTTAGTAGGAATGTTTTGTCAAATAGAAAGCCAGAACATACTTCAGCAGCACGAGCAAGAGGCTTTAATAAAACGTCtgtgacagaatttttttcattgttagaAGATAttctaaacaaatataaatttactcCAGACCGAATATGGAATGTGGATGAGACTGGAGTCTCTGCAGTGCCAAAATCATCGCCAAGAGTTATAGCTAAAAAAGGGAAGAGACAAGTAGGTGGAAAAACTGTTGCTGAGCGAGGTGAGACTGTGACGGCTCAGATTTGTATGTCAGCAGCCGGATCATTCATGCCGCCAATGTTGATTTTCCCTCGTGTAAAAGAAAATCAGGGGTTTCTCCAAGGTGCACCAGCTGGAGCCTGGGCAGAGTTTCACAAAAGTGGCTACATGCAGATGGATTTGATGGTGAAGTGGGCAGTGAAGTTTGTGGAATTTAC
- Protein Sequence
- SWTDGQMQLALDSVLQGKSCKTAASEFGVPRTTLQDRLKLINNPLHNQNSIKTAVGFTRVFDRDQEAALAAYINDMELRLIGLSALDVRRLAFEFAEKLRIPHNFNREKKLAGTDWLTGFLSRNVLSNRKPEHTSAARARGFNKTSVTEFFSLLEDILNKYKFTPDRIWNVDETGVSAVPKSSPRVIAKKGKRQVGGKTVAERGETVTAQICMSAAGSFMPPMLIFPRVKENQGFLQGAPAGAWAEFHKSGYMQMDLMVKWAVKFVEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -