Tsin034853.1
Basic Information
- Insect
- Torymus sinensis
- Gene Symbol
- -
- Assembly
- GCA_030522985.1
- Location
- JAPYZP010046872.1:587-2453[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-11 8.8e-08 33.6 0.0 4 43 27 66 24 68 0.87
Sequence Information
- Coding Sequence
- ATGGGtaagagaagaaaagaaagcGCCAAAAAGGATTGTAAGCAACCAAAAAGAAAGCGCATGTGCTACGATAAAGAAAGTGTATTGGCGGCTTTGGAAGAAGTTCAAGAGAAAAAAAGTACCATCAGCGAAGCTGCAAGAAAGTTTGGTGTTCCGAATTCAACCTTAAGATCAAAAAATAAAGGGGTTTATGCCAATAAAAATCCTGGGCCATCGCCTGTTTTATCTGCCAAAGAAGAGGCAGAATTATCCAGTTGGATTATTGAATGCTCTCGGCGAGGTTTCCCTGTGGGCAAAACACAATTGCTTGTAAGTGTCAAGGAGATATGTGAAAATCACAAGAAGAAAACtccctttaaaaataatttaccagGAAGGTACTGGTTTGAAGGGTTCATGAAAAGAAACCCACAGATTGCACAGCGAATATCTGAAAATGTGTCAATGAACCGTGCAAACATTTCTGAAGAAAGTATAAGAGCATGGTTTGCTGAAATTTCAAACTACCTTGGCGATATGCAACTTTTAGATATGGAGCCTGATAGAGTTTTTAATTCTGATGAAACTGGTATGCCTTTAAATCCAAAATCGTCAGTTGTTCTAGCAGGAAAAGGATCCAAAAATGTGTACAGTGTAGTGGGCAACAACGAGAAGGAAAATATCACTGTCCTGGTAACAGGCAGTGCTGCAGGAGACCTTGCACccacttttatacttttctccGGAAAATCACTGCCAACCAATGCTGCAGCTATGGCTCCTCCAGAGTTTCAATTTGGAGTTTCAAATAATGGGTGGATGACCGCCAAAAACTTTTATGACTATATGGCAAATTGCTTTGAACCGTGGTTGACAGTCAAAGGAATAAAGCGTCCAGTTTTGTTTTACCTCGATGGACACTCTTCTCACATGACTTTGAATCTAAGTGAATTTTGTTCGAGTCATGATATTATACTTGTGGCTTTGTATCCCAATTCTACACATCTGTTACAACCCTTGGATGTTGCTTTTTTTAAAGCCTTAAAGTTTCAGTGGgagaaaaattacaaagaaCACTGTAAAAACTCTGTAACTattggtatacaaaaatatcaatttgcATCACTCTTACAAAAAACACTCAACTTGATGGATATTAAGAAGACTCTTAAAAATGGATTTGCTAAATGTGGACTTCACCCATTGGATGCGAATGCAATAGACTACAATAAAGTTCTACgaccaattgaaaaaaaaaatcagagtAATCAACTTCCTAATGGTATTACGGAGAAgagtattgaaaatgttgataaaTTGCAAGTTATTGAAAGTCTATTGAGTGATTTTCAACTAagttcatataaaatgaatacggATCCAGCTTGGAAAGGTCTGGAGGCtgataaaaatctatttaatatttggTATAGCCTATCTCACCCTCAAGCGCAAGCAGCAAACACTTCCACACCAATAGTTGATGATATAGATCTTGAGAATAGCTCATATGATGATAATGTATTCAACGATAACTATTATGGTggtaaattaattgaaaatatacctGCTGCAAATGATTGTGATGCTTCGCTTGATAATGATCCACTATCGAACAACCAGTATGAAAATGTATTAGTCATAACATCTGAGTCTACGGGTACTGATagtaataaagtaaataaatttattatttaa
- Protein Sequence
- MGKRRKESAKKDCKQPKRKRMCYDKESVLAALEEVQEKKSTISEAARKFGVPNSTLRSKNKGVYANKNPGPSPVLSAKEEAELSSWIIECSRRGFPVGKTQLLVSVKEICENHKKKTPFKNNLPGRYWFEGFMKRNPQIAQRISENVSMNRANISEESIRAWFAEISNYLGDMQLLDMEPDRVFNSDETGMPLNPKSSVVLAGKGSKNVYSVVGNNEKENITVLVTGSAAGDLAPTFILFSGKSLPTNAAAMAPPEFQFGVSNNGWMTAKNFYDYMANCFEPWLTVKGIKRPVLFYLDGHSSHMTLNLSEFCSSHDIILVALYPNSTHLLQPLDVAFFKALKFQWEKNYKEHCKNSVTIGIQKYQFASLLQKTLNLMDIKKTLKNGFAKCGLHPLDANAIDYNKVLRPIEKKNQSNQLPNGITEKSIENVDKLQVIESLLSDFQLSSYKMNTDPAWKGLEADKNLFNIWYSLSHPQAQAANTSTPIVDDIDLENSSYDDNVFNDNYYGGKLIENIPAANDCDASLDNDPLSNNQYENVLVITSESTGTDSNKVNKFII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01465066;
- 90% Identity
- -
- 80% Identity
- -