Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030522985.1
Location
JAPYZP010000924.1:1383-9390[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-25 3.3e-21 77.3 0.0 1 89 122 208 122 208 0.95

Sequence Information

Coding Sequence
ATGACGATTATCATGAGGATTGTTAAGTGCAGAAAAGTGGAGCTGGAGATTGACGGATGTTTGACGCCAAAACTAAAAGGGCGGCCTCGGAGGAAACGCAAAAAGCGCAGCGTGTCCCCGGGCGAGTCGAGCAACGAGAGCGAGGCCTCGGTCGCCTCCTCGGCTGCCGCCTCCACGTCCAAGGGCTCGAGCTCGAGCAACAACGGCAACGGCGGCAACGCCAACAATGGCCAATCGACGACGGGACCGAGCGGTGTACCTCTCGGACCTGGACGACCGCCGGGcgcctcgtcgtcctcgtcctctAGCTCGAGCTCGTCGTCCTCATGTCTGGCGCGGCGCCCCGACCGCAAGGTCACCGCCGAAGAGAAGAAGTTCGTCAGCGAAGTCTACAGCTTCATGACGACACGCAACACGCCGCTCGGGAAAATGCCCCTGCTTGGATACAGACAGATTGATCTATACCTGTTCTACACAAAAGTTCAGGATTTAGGAGGATATGATAAAGTTAGTGCAAATCGTCTTTGGAAATCAATCTATGATGAAATGGGTGGTAATACAGGTTCAACGAGTGCTGCGACAATAACAAGAAGGCATTACGAAAGgTTGTTACTACCTTATGAGAGATGTCAGAAAGGTGAAGATTCCAAAATTAAGCCAAATCATGGCAATAGACGTATCAAAACACCTAGTATATCAGATGCATCAGAGGATTCCGTTGAAATAAAGAGGGAAGCAGATAGTCCCACGCCATCAGAAACTCCTCCTCCTACTGAGGCAACTAACAATAACAATTCTACGATAATTACACCTCCTTTACAGTCAATTCTTGCAACTACGCCATTCCTACCAGGAGACAAACCTCGCTCGGAAAGCGGCAAGACATCGTCATTGCGCAGCGTGAGGGTGAAGCCCGAGCGTTTAAAGTCCCTGAATACGATAATTGCAACCAGCAACTCAGCGCCTGCCAATCAGCAACAACTGCCCACCTCGCCGACCTCCCTGCTGACGACGTCGAATAACACGACCTCGTCGTCGGCGACCTCTTCGCCCACGGGCAGTCCACCCGCTTCGACCACGCCAACGAACGCCAATCAGCATTCTGTGCTTGAGAGGCAACTCAATAGTCCTTTGATATCACAACAGGTACCACCATCGTGTTCACCACCTGGATTGCCTGTGAGCACAGTGGTAACGAACGCCACGACAGTGGTGACGCTGACCCCGCCACCTGAAAAAGACATGAAGGAGATCAAGCTCGATTCAAAGCAAACAAGTCTGCTGGCTCAGGGCAAGGAAAACATTCCTGTGTTCGAGGAGAAAAGCCCGATATACGTGGACAAGCCTCGCTCGCCCGAGGTTATAGACCTAGAGACGGAGAACGAGTCTGGTACCAGGGACAAGCTTATCATTCCGAGCTTCAAAAAACGAAAACTCGAGATACTGCGTGAGGGCGGTCTCGAAGTTACTGCTGTTGATTTAGATCCTCGACCGAGCGTGATCCAACCGACGACAACGACCGCAACGACGACAACGGCTTCGCCTTTGCCAGCCTCAACAACGACAACGACTATGTCCTCCCCGTCCTCACCGGCTTCCTCGCCACAACTGATCAACGTGACCGTCACCCCAGACATTAGCCATATGCTACCACGGCCCGCTTCCAACGATAGTGATCACCATCCAGTGTCGCCCGTACGGCCGCAGGTCGCTGGTGGTTCAAGCCCGAGTCCCCGACTGCAGCCGCAACCATGGGCCGTAATGGATCCGAGCTACGGTATCGCACCTGCGAGTCAGGCTCAGGCGACGAACAGCCGTGTTATCAATCTCGGCAGCTCCAATCCATCTTCATTGATACAGTTGTACGCGAACGCGAACGTACCCATGCCGAGGTCGGTGAACATGGCCGCTGCGCAACACCAGCACGCGATGCAACATCAGGTACCGACACATATACCGCAACAGCATCAGGCTCCGAACCGATTGCTAGCGCCGTCACCCGTTCTTGCATCCGAGAGTAGGTTGCCTGGTACGCCGCACAAGGTCACCCAGTCGAGATCGATTTTTGGCACCGATGGCAGCACAACGTACGGAAATCCGAAGGATATTCTTGTACCTGCTAGAATCGCAGGCTTGTTATCATCACCGAGCTCGCGGAGTAGCGCGTCCAGCAGCGGTAACGAAATGTCGCCGAACGGCGTGTTGGATCTCACAAAGGCGTCCCCAGATCGACCGATGTACGGACGACCGAACCTCGAGATAGTCAGGGTACCGGTTGTGCCTCGCCCGAACCCGCTAAACTTTGACACAAATCACTTGCGCGGTCCACCCGTCGGCATGCCCACCAATCTCAGCAACAAACAACAGCAGcatcagcatcagcagcagcagcagcaacagcagcagcagctgctacaccaacagcagcaacagcagcagcaccaacaacagcaacaacagcagcatcaacagcagcaacaacaacagcagcagcaacaacagcagcagagcAAACAAGTAGGACCGCCGCAAGACATGAGAAATCAGTACATGGGCGGTCCCTCTTCGAGCTCGGGCACTGGTACTTATTCGAACGTACTCGACAGTCGTACGATGGCCACGAACAATCTCGAAATCACGCTCGTCAGTCCAAAAAAGAATGGCGCGGGTATGGTTGACGTGCCTCAGCCAAGTCCCTCCAGGAGTAATGTACCGTTAAATATGCCTATGCAGAGGAGGCCCCCGCCACATCTACAACAAATGCAGCCACAGTCGCAACCTTCTTCACatccacagcagcagcagcagcagcagcatcagcaaaAGCACCTCATGAATGGCAAGTACCCTAACAGGCTACCCTCAGAGGCTGCGTCGCCCTATACTCCTAGGAAAGCGTCGAGCTCCAGTAGCATGGGcagtagtaataatacacaCCACCCGGTGATACCGAACGTACCTAATCTCAGCCACTTAAACGCGGCGGCAAACTACGCCAAAGCAAACCAGATGAGTGGCTACCATCCGATCTCAGGAGGCGAAAAGAGAAAAGCCACTTCTCCGGCGAATTCGAATAGTAAGGAGCAGCGTAGAATAAGCGAAAGCGAGAAAATGACgatacagcagcagcagagactAATGGAGGCAGCCACGGCCGCGTCACCATCGAAATCAGCAAGgGATGCCGAGGCGTCACGTAGACACAGTATGCCGACTCTGCCTAGCCTACCGACGGGCTTTATTCCAGGCGTTCCGGCCAACAGTCCGGCCTTCCTGGCACACCAACTCGCCGCGGCGAGTGGCGGTTCCGCAGCAGCGGCGGGCAAGTTCATGCCCATGATGGACCCAGCAGCGTCGATGTATTATTCCTTCTACAACGGCCTCTACCCCGGGTCCGTAGCGCCAAACGCCGCGGCCTCGAACTACATGTCACCCGAGCTCAGCGCCTACTACTCGGAGCTCCTCGCCAACACGTCGGCTCAGCAGATGGCCATGGTCGCAGCGGTCCAgaaacaacaacagcagcagcaacagcaacagcaccagcagcaccagcagcaccaACATCAGCCCAGCGTGCCAACGACTAAATAG
Protein Sequence
MTIIMRIVKCRKVELEIDGCLTPKLKGRPRRKRKKRSVSPGESSNESEASVASSAAASTSKGSSSSNNGNGGNANNGQSTTGPSGVPLGPGRPPGASSSSSSSSSSSSSCLARRPDRKVTAEEKKFVSEVYSFMTTRNTPLGKMPLLGYRQIDLYLFYTKVQDLGGYDKVSANRLWKSIYDEMGGNTGSTSAATITRRHYERLLLPYERCQKGEDSKIKPNHGNRRIKTPSISDASEDSVEIKREADSPTPSETPPPTEATNNNNSTIITPPLQSILATTPFLPGDKPRSESGKTSSLRSVRVKPERLKSLNTIIATSNSAPANQQQLPTSPTSLLTTSNNTTSSSATSSPTGSPPASTTPTNANQHSVLERQLNSPLISQQVPPSCSPPGLPVSTVVTNATTVVTLTPPPEKDMKEIKLDSKQTSLLAQGKENIPVFEEKSPIYVDKPRSPEVIDLETENESGTRDKLIIPSFKKRKLEILREGGLEVTAVDLDPRPSVIQPTTTTATTTTASPLPASTTTTTMSSPSSPASSPQLINVTVTPDISHMLPRPASNDSDHHPVSPVRPQVAGGSSPSPRLQPQPWAVMDPSYGIAPASQAQATNSRVINLGSSNPSSLIQLYANANVPMPRSVNMAAAQHQHAMQHQVPTHIPQQHQAPNRLLAPSPVLASESRLPGTPHKVTQSRSIFGTDGSTTYGNPKDILVPARIAGLLSSPSSRSSASSSGNEMSPNGVLDLTKASPDRPMYGRPNLEIVRVPVVPRPNPLNFDTNHLRGPPVGMPTNLSNKQQQHQHQQQQQQQQQQLLHQQQQQQQHQQQQQQQHQQQQQQQQQQQQQQSKQVGPPQDMRNQYMGGPSSSSGTGTYSNVLDSRTMATNNLEITLVSPKKNGAGMVDVPQPSPSRSNVPLNMPMQRRPPPHLQQMQPQSQPSSHPQQQQQQQHQQKHLMNGKYPNRLPSEAASPYTPRKASSSSSMGSSNNTHHPVIPNVPNLSHLNAAANYAKANQMSGYHPISGGEKRKATSPANSNSKEQRRISESEKMTIQQQQRLMEAATAASPSKSARDAEASRRHSMPTLPSLPTGFIPGVPANSPAFLAHQLAAASGGSAAAAGKFMPMMDPAASMYYSFYNGLYPGSVAPNAAASNYMSPELSAYYSELLANTSAQQMAMVAAVQKQQQQQQQQQHQQHQQHQHQPSVPTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01464822;
90% Identity
-
80% Identity
-