Tger000959.1
Basic Information
- Insect
- Torymus geranii
- Gene Symbol
- pnr
- Assembly
- GCA_900474355.1
- Location
- UCWB01008746.1:801-8244[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-18 3.5e-14 52.9 2.6 1 34 182 214 182 216 0.96 2 2 4.5e-19 2.9e-15 56.4 6.2 1 35 241 274 241 275 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGAGTGGGAGCGGCGGCTACGGCGCTAGTTCTGATTACCAGCAGcaaacgcagcagcagcaacagcagcagcaacagcagcagcagcaacaacagcagcaacagcaacaacagcagcacgCCCAGCAGCTTCAGGCTCCCGTCTATGTGCCTTCGTCCAGGCCCACGATACCCTCCTCCACCACGGCGGCCCAGTACCACTCGTTCCCCGGTTCCGCCTCGCCGGCttgGGAGAAGGCAGCGTCGTGGCAGCACGGCGTGGATACTTACGCGCACCATGCGCTCGCCGCGGGTGCGCACACAGGCGGCTCGGCCAGCGGCATGGCTCCGCACGCCGGGCACGCGCACCCGCACGCCGGCCATCCTCACACGGCGCATCCGCACTCGGCGAGCCTCGCGGCGGCCGCGGCCTCGCCATTCTACGCCCAGAACGTCGCGATGATGTCCTCGTGGCGGGCGTACGACAGCGCCGGCTTTCAGCGGGCCTCGCCCTACGACACGGCGATGGACTTCCAGTTCAGCGAGGGCCGCGAGTGCGTGAACTGCGGGGCGATCTCGACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTATCTCTGTAATGCCTGCGGACTTTATCACAAAATAAATGGCATGAACCGTCCTCTCATCAAGCCCACGAAGCGCCTgATCTCGGAATTCCAGACGGCGACGCGGCGGCTCGGGCTCTGCTGCACGAACTGCGGCACGCGCACCACGACCCTCTGGAGGCGCAACAACGAGGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTTCAAGCTGCACGGCGTCAATCGGCCCCTGGCGATGCGCAAGGACGGCATACAGACGCGCAAACGCAAGCCGAAGAAGACGCCCGAGCAGTCGAGCGCCGGCGGCGGTGGAGCTGCTGGCGGCGCGGGAGGACGACAGTCCGGCACGACGGGGGAGCACGATAACGGCGCCTCCACGGCCTCCTCGCCCTCCAATGAGTTAAAGCCCAACCACCACCAGTCCCAcccccagcagcagcaccagcaccaGCTGGACGGCACGGGCAAGTCGTCCTCGTCAGCAAATTCAACGTCCTCGAGTGTGGAGCGGCCAGTCTACCTCGGCCACACGTCCCTCCTGTCGTCGAGCAACAGCGCCGGCATGCCAACGGTCAAGACGGAGCCGCGCAGCTGCGACGTCATCGGCCAACCGTACTCGGCCTACTACCACCAGCACCATCCGCACCAGCTCGCCAGCATGCCCACGAGTGCTGGCTCCGGCGGGGAATCCCATCAGCAGGCGAACTACTACCCGAGCCAGGAAGCGGCGCCTTACCATCATCAGCACCACGTTACGGCAGCCGCAAAACTCC
- Protein Sequence
- MFHGSGSGGYGASSDYQQQTQQQQQQQQQQQQQQQQQQQQQQHAQQLQAPVYVPSSRPTIPSSTTAAQYHSFPGSASPAWEKAASWQHGVDTYAHHALAAGAHTGGSASGMAPHAGHAHPHAGHPHTAHPHSASLAAAAASPFYAQNVAMMSSWRAYDSAGFQRASPYDTAMDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEQSSAGGGGAAGGAGGRQSGTTGEHDNGASTASSPSNELKPNHHQSHPQQQHQHQLDGTGKSSSSANSTSSSVERPVYLGHTSLLSSSNSAGMPTVKTEPRSCDVIGQPYSAYYHQHHPHQLASMPTSAGSGGESHQQANYYPSQEAAPYHHQHHVTAAAKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01469336; iTF_01465863; iTF_01470163;
- 90% Identity
- iTF_01469336;
- 80% Identity
- -