Basic Information

Insect: Torymus geranii
Gene Symbol: Zbtb41
Assembly: GCA_900474355.1
Location: UCWB01033493.1:1-2419[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.039 5.1 8.6 0.2 1 23 89 112 89 112 0.92

2 7 0.00011 0.014 16.7 4.3 1 23 121 143 121 143 0.97

3 7 1.7e-07 2.1e-05 25.5 5.1 1 23 168 190 168 190 0.99

4 7 0.00011 0.014 16.7 3.7 3 23 197 217 195 217 0.97

5 7 7.8e-05 0.01 17.1 0.2 1 23 222 244 222 244 0.99

6 7 4.5e-07 5.8e-05 24.2 0.7 1 23 252 274 252 274 0.98

7 7 0.12 15 7.1 1.7 1 23 280 303 280 303 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.039	5.1	8.6	0.2	1	23	89	112	89	112	0.92
2	7	0.00011	0.014	16.7	4.3	1	23	121	143	121	143	0.97
3	7	1.7e-07	2.1e-05	25.5	5.1	1	23	168	190	168	190	0.99
4	7	0.00011	0.014	16.7	3.7	3	23	197	217	195	217	0.97
5	7	7.8e-05	0.01	17.1	0.2	1	23	222	244	222	244	0.99
6	7	4.5e-07	5.8e-05	24.2	0.7	1	23	252	274	252	274	0.98
7	7	0.12	15	7.1	1.7	1	23	280	303	280	303	0.94

Sequence Information

Coding Sequence: TTCGACTACTCCGAGCGCTATTACCCGCTGACGGTCCTCGGCGACAAGGAGACCAACGGCGAGGTGGCAGCGATGGACTCCGCCTCCTCTTCGCCCGTGATGTTTacaaagaagaagcagcagatgCGCAAGCTCGAGAGTAGCACGTGTACCGAAGAGCAGCATCCCATCGTTGTCGTCAAAGTCGAGGAATCACATGCTACtaacgacgacgaggaagaggaggaagatgaggaggaggaggaggaggacctACCATTGGCCTACTACTGCAAACCTTGCGGCATGTTTTTCGCGTCACAGAATCTACTCGACGAGCACTCCGCGATGCAACATAAGCTTACGACTATGAAGAAAAGGTTCGATTGCGCGCACTGCGGTAAGATGTGCCGCACGGCTCTGAGCCTACGCCAGCACTTGAAACGCCATAAAGACGCCGTCAGTCCGAAGAAAGAGgacgaagaggaggaagaggagggtGATGAGAAACTGGAACAGGAGTACACGTGCAACACTTGCGGCAAGGGATTCAGGCACAAGAGCAACTATCAGAAACACTTGATGCGCCATACAGTGGGCGACCTCGCGTGCAAACACTGCCCCAAGAAGTTCAGACTGTTCAGAGACCTGACGAGGCACGAGAAGACGCATTTTATGCCGAGCTACAAGTGCAAAGAGTGCGACTATGAGACGACGGTACTCGCTGCCCTCACGATTCACATGACCAGGCACACGGATAAAGCTGAGCTGCCGTTCAAGTGCAGCGAGTGCGACAAGAGGTTCCGGAAAGCTGCCGAACTGCAAGAACACTACAACATACATTCTGGCGATAAACCGTTCGTTTGTCAAGTGTGCTCGGCAGCGTTCTTCTTGAGACGGCAGTTGTCCGCGCACTGCAGGAGGCTACATCCCGAGCTGAAGGCGCAGAAGGTCACGAaagCTTATATAAAATCCATGACTACCGTTTATGGAATGAAACGGTTTCTGCTTTTGGCTTCTACCAACTAG
Protein Sequence: FDYSERYYPLTVLGDKETNGEVAAMDSASSSPVMFTKKKQQMRKLESSTCTEEQHPIVVVKVEESHATNDDEEEEEDEEEEEEDLPLAYYCKPCGMFFASQNLLDEHSAMQHKLTTMKKRFDCAHCGKMCRTALSLRQHLKRHKDAVSPKKEDEEEEEEGDEKLEQEYTCNTCGKGFRHKSNYQKHLMRHTVGDLACKHCPKKFRLFRDLTRHEKTHFMPSYKCKECDYETTVLAALTIHMTRHTDKAELPFKCSECDKRFRKAAELQEHYNIHSGDKPFVCQVCSAAFFLRRQLSAHCRRLHPELKAQKVTKAYIKSMTTVYGMKRFLLLASTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -