Basic Information

Insect: Torymus geranii
Gene Symbol: -
Assembly: GCA_900474355.1
Location: UCWB01020360.1:2-3744[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00092 0.12 13.7 0.9 1 23 143 166 143 166 0.95

2 9 2.4e-07 3e-05 25.0 1.9 1 23 171 193 171 193 0.99

3 9 4.9e-06 0.00063 20.9 1.1 1 23 199 221 199 221 0.98

4 9 5e-05 0.0064 17.7 0.5 1 23 227 250 227 250 0.90

5 9 3.8e-06 0.00049 21.2 1.4 1 23 256 278 256 278 0.97

6 9 2.3e-05 0.003 18.8 1.4 1 23 284 306 284 306 0.98

7 9 0.0025 0.32 12.4 5.3 1 23 312 334 312 334 0.96

8 9 9.6e-08 1.2e-05 26.3 1.1 1 23 340 362 340 362 0.98

9 9 0.0023 0.29 12.5 1.3 2 23 371 392 370 392 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00092	0.12	13.7	0.9	1	23	143	166	143	166	0.95
2	9	2.4e-07	3e-05	25.0	1.9	1	23	171	193	171	193	0.99
3	9	4.9e-06	0.00063	20.9	1.1	1	23	199	221	199	221	0.98
4	9	5e-05	0.0064	17.7	0.5	1	23	227	250	227	250	0.90
5	9	3.8e-06	0.00049	21.2	1.4	1	23	256	278	256	278	0.97
6	9	2.3e-05	0.003	18.8	1.4	1	23	284	306	284	306	0.98
7	9	0.0025	0.32	12.4	5.3	1	23	312	334	312	334	0.96
8	9	9.6e-08	1.2e-05	26.3	1.1	1	23	340	362	340	362	0.98
9	9	0.0023	0.29	12.5	1.3	2	23	371	392	370	392	0.96

Sequence Information

Coding Sequence: GATGGGATGCCACAAATGATCTGCCAAATGTGTCGCTGGAATTTAGATCGTTGCTACAAATTTAAGCAACAATGCAAAAAAGCTGATGAAGCCCTACGTGCCTATCCAATGTCAGGAGTTCTTCCAAGACCATTTCCTCCAATAACTAATGATCCACCAGAACAGAGTAATAAGAGAACTTTAGAATCCAGATCTGCTAATGAACAGACAAAGAAAGCCCGTCTAGACAACGGTGACAGAGAACGAAGAGAGGTGCAAGAGTATACAAGTCAACGGCAGTCTGAAACACGCGCCCAGGCCCAGCTGCGCGAGAAGGAAGAGCGGCGTGAACTGTACGACGAGGACCAGGAGGCGGGcagtgaggccgaaaatgaaGTGAACGATGCAAAAGACGACACGAAGCTCGAGCCCGGTGAAATTCGCGTTCACGCATGTAACCAATGTGAGCGCACATTCCCTCTACTCCAGTCGCTGCAGCTGCACATGCAACGCGCCCATCGCGACCGTAACTATCGCTGCACCGAGTGTGATCGACCTTTTTTCAGCAAGTCTGACCTCCAGAAGCATATGACTACGCACTCGGAAGACAAGCCTTATAGCTGTCAGATCTGCCAGAAACAGTTCTCTCGTGCGAATCTCTTGCAACGCCATGAAAAGGTGCACAGGGAGGAGTTGCGTTACAGGTGTCCTCATTGCGATCGAGAGTTCTTCACAAGCGAGGATCTTGAAAGTCACGAAGAAGCTGTGCACAAAGCCATCAAGCCTTACCAATGTAACATCTGTAACAAGCGCTTCACTTATAAACAAGGTCTTGAGCGACACGAAATGCTCCACAGTGAAGACAAGACGTTCAATTGCGAATACTGCAAAGAAGCCTTCCGCTCGAGCACAAAGCTAGCTCGTCACTTGACCACCCATGCTGGCCATCGCCCCTACTTGTGCAAACTCTGCCCGCGTACGTTCCTCTTGTCGCACCATCTGACTCGTCACATGCGCAGTCACTCCGTGGAGAAGCGCCACCAATGCGAGGACTGTGGCAAGGCCTTCAAGCGCAGGGAGAGTCTTGAGGTACATCAGCTGACGCACACAAAGCGCTCTGGTATGGGTCTGACATGTGATGTCTGCCAGGAGTCGTGCCGCAACCGAGCCGACTACGTGACGCACATTAAGCAACACGTCGACGCTGGCGAAAAAATGGGACCGGACGGTCTGCCACCTGATAACAAGGAGAAGGCCCTCGAAACTGAGaccgaagaagaggaagaggaggaggagcagtACTCGGACGACGATTACGAGCCGCCTTCGTCTTACCTGTACAAGAAAGCGCAGCAAAAGATAATCAAGAAGGTCGAGAGCGAGGAGGAACCTTTAGAAAAGGAGGACAAGAAGGAGCAAGTAGTATACGTACGAAGCAAGGATGGCAACGTTCTCAAAAAAACGATCAAAACGCTGATGCCAATACAGCGCCgaggggagcagcagcagccgcaagaAACGAAATCCAAATCGACCGTCGCTAGCCCTCAAATCATTACCGCGAAGCAGCTGAAACAACAAGACGAGGCGCAGTCAGTGCAAACCCCGCAGAAAGACAGAATGGACGAGACTGAAGCACAGGTGCAGAAGATTGTCGCCTCTGTTTTCAAGGAGCACAAAATACCGCGGAAGCACCAGGGTCAGGATACGAACAAGGAAACGCCGCAGTCTATACAGAGACAAGCGTCTCAGCCTGTGCTCACTCCCACTATTATCAAAGAGGAGAAGTTGGATACTCCTATTGCTTCTATCAGTAGTCAAAAGAATGTGAATACTGTCAAGGTTATCAAGAGAATTGTGGTCAGAAAACCGGCGGGTAGTGCCGATGGCGTTCAAACTATTTCAGCGCCTATTAGGGAACTGGTGCAGGAGGCAACAAATGCGCACCAACAGCAACAGGCAGCTATAGCAACTACTTCGACATCCGGCCCCAAGGTCACTAAAAGAGTTATTGTCCGAAGAATCATTCGCCAGGGTGATACTACGCGCGAGGTAATCATGAATCCTGATGGCACCATTATCGATCCAGCAGAACTTGCCAAATTGCCCACCGGTAACGTTGTGAAACGCGTCGTTGTGAAAAAGCCTCTAGATAAAGGTCAAAACATCGAACAGATGCTACAATCAGCTGATGCAAAACGCATTATCAGGATGGCTGAGTGTGAAAAGGTCGCTAATATTTTGACGGCGCCCAAAATAGTTACTCAGGTGCAAAGAGTCGAACAGCCACAACCACCGAAACAGGTCGTCATCAATGACGACCGTGAGACAAAAGAGAAGCTGGAACGGTTGGAGAAACGAGTTGAGCAACAGCGACTGAAGATCGAAGAGCTGCAGGCTCGTAAGCAGCAGCAAGAGTACGAGGCGTGCGACGAGATGCTTCCGGATCGTCATGATGAATCCGAGGATGAGCAGCAGTTGCCTCTGAAACGTGTCTTCGTCAAGCGAAAACAAAGTATTTACGACGAAGAAAAAGAATACATCGATGAGAAGGACAAAGAAGAAGATGAGCAAGCCGAAGCTTGTGTTAGCGGAGCGAGTCCCAAAATGCCTAAGGAGGAAGAATCATCGCAAGACGACAGAGCCATGAGTCCCTCGAGATCGATCGAAGACGccaaaatcattattatcaaaCCAGAACAGAATACACCAGACGTCGATGAAATGAGCCGCGAGCTTTGCAGTATACTTGACTCAACCGACAGCGTTGTTAAGATGCAGGAGAATGTTCTCAATAATCTAACCCAGATAACGTCTGTTGGTGAAACGTCCTCTCAAAAGGCAATGCCAATTTTGGAAACTGAAGGAGAGACTACAGAGCAAATAGCAGAAGCATTAGAAGCCCCAGATACTGAGATGGCACAGGAGGAGCCTTTGGAGCAAGAAGAAGTCATTACCGGAGATGATGTAGTAGAACAAAGTGAAGAACAGgtacaagaagaagaagtaagTGAACAACATGATCCTTCTCTTCAAATAGTTATTACACAAGCCGAAGATGAAGGAATAAAACTTCAATATGAAAACTCACAAGAAGATGTCAGCCAGGTAGAAGCTACAGAAGAGATAGCCGTTGAAAGGATTGACAGGACACAATCTGTGTCGACGCTGAGCCCGCAGGTGCTTTCCGAAACAAACGATATGTTCGAAACGTCGGTGACATCCATAGAAGTGGAGGTGGATAAAAGTCAAGATCAGGCGAACTTGGAAGAATCCGTCATTGAGATGTCGGCTACGAGCGAAACTATCAATTTGAATGAAACAACGGACAGCAGAGATAGTTTAGAAGACAAACTATCACAAATGGAGGGCTAG
Protein Sequence: DGMPQMICQMCRWNLDRCYKFKQQCKKADEALRAYPMSGVLPRPFPPITNDPPEQSNKRTLESRSANEQTKKARLDNGDRERREVQEYTSQRQSETRAQAQLREKEERRELYDEDQEAGSEAENEVNDAKDDTKLEPGEIRVHACNQCERTFPLLQSLQLHMQRAHRDRNYRCTECDRPFFSKSDLQKHMTTHSEDKPYSCQICQKQFSRANLLQRHEKVHREELRYRCPHCDREFFTSEDLESHEEAVHKAIKPYQCNICNKRFTYKQGLERHEMLHSEDKTFNCEYCKEAFRSSTKLARHLTTHAGHRPYLCKLCPRTFLLSHHLTRHMRSHSVEKRHQCEDCGKAFKRRESLEVHQLTHTKRSGMGLTCDVCQESCRNRADYVTHIKQHVDAGEKMGPDGLPPDNKEKALETETEEEEEEEEQYSDDDYEPPSSYLYKKAQQKIIKKVESEEEPLEKEDKKEQVVYVRSKDGNVLKKTIKTLMPIQRRGEQQQPQETKSKSTVASPQIITAKQLKQQDEAQSVQTPQKDRMDETEAQVQKIVASVFKEHKIPRKHQGQDTNKETPQSIQRQASQPVLTPTIIKEEKLDTPIASISSQKNVNTVKVIKRIVVRKPAGSADGVQTISAPIRELVQEATNAHQQQQAAIATTSTSGPKVTKRVIVRRIIRQGDTTREVIMNPDGTIIDPAELAKLPTGNVVKRVVVKKPLDKGQNIEQMLQSADAKRIIRMAECEKVANILTAPKIVTQVQRVEQPQPPKQVVINDDRETKEKLERLEKRVEQQRLKIEELQARKQQQEYEACDEMLPDRHDESEDEQQLPLKRVFVKRKQSIYDEEKEYIDEKDKEEDEQAEACVSGASPKMPKEEESSQDDRAMSPSRSIEDAKIIIIKPEQNTPDVDEMSRELCSILDSTDSVVKMQENVLNNLTQITSVGETSSQKAMPILETEGETTEQIAEALEAPDTEMAQEEPLEQEEVITGDDVVEQSEEQVQEEEVSEQHDPSLQIVITQAEDEGIKLQYENSQEDVSQVEATEEIAVERIDRTQSVSTLSPQVLSETNDMFETSVTSIEVEVDKSQDQANLEESVIEMSATSETINLNETTDSRDSLEDKLSQMEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01465627;
90% Identity: iTF_01469093;
80% Identity: -