Tger017895.1
Basic Information
- Insect
- Torymus geranii
- Gene Symbol
- retn
- Assembly
- GCA_900474355.1
- Location
- UCWB01000321.1:18443-24238[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-20 9.9e-17 62.0 0.0 13 89 1 75 1 75 0.94
Sequence Information
- Coding Sequence
- ATgcgccgcgcgcGGACGCCGATCAACCGACTGCCGATAATGGCGAAATCCGTGCTGGACCTATACGAGTTGTACAACCTGGTGATCGCGCGGGGCGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGCCTTCACCTCCCCTCAAGCATAACCTCCGCCGCGTTCACGCTGCGCACCCAATACATGAAATACCTGTACCCGTACGAATGCGAGAAGAAGCACCTATCGACACCAGCCGAGCTGCAAGCAGCGATCGACGGCAACCGTCGCGAGGGTCGACGCAGTAATTACGGCGCGTACGGTGGCGGAGGACCGGATGGCGTAGTTCAGCGTAGCTCCCACACGCCGAGTTCTCTTGCCTCCCTGCACCAGATATCGCCGCTGTCGCTGGTATCGACACTGGCAGCCGCGGGCGCTGCTGCTAGTGGCCAACACCAGGTCAATCCTCAGTCTCTGGTGAATGGGAGCGCGGCTCACACACCGCTGCCCCATCATCCCCATCATCCGCAGCACCAGCAGGCAGGCCTGGGACAAACGCCTAGCGCTGGTGAGTTTCTGATGAGTATGTCTCCAAATTGTTTCGTTTTCAATCGACATGCggattttatagatatatatgcgcgGATGTATGGTGATGCGGTATATTATGGCTATtatggttctttttttctcgctggGTTTGTGATTGAGAAGAAGACTGTTGGATTTTTCGCTTTAgagtaa
- Protein Sequence
- MRRARTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKHLSTPAELQAAIDGNRREGRRSNYGAYGGGGPDGVVQRSSHTPSSLASLHQISPLSLVSTLAAAGAAASGQHQVNPQSLVNGSAAHTPLPHHPHHPQHQQAGLGQTPSAGEFLMSMSPNCFVFNRHADFIDIYARMYGDAVYYGYYGSFFLAGFVIEKKTVGFFALE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -