Basic Information

Gene Symbol
gata5-a
Assembly
GCA_900474315.1
Location
UXGD01016402.1:1435-3510[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-05 0.089 13.1 1.6 1 26 303 327 303 334 0.90
2 2 3.4e-17 1.7e-13 50.6 7.8 1 35 360 393 360 394 0.97

Sequence Information

Coding Sequence
ATGCACAGCAACATAAAGTGCGAGGCGGAGTGGGGCAGCGATAGCTCGGAGAGGGTCTCGCCAGTACCAGAGCGGACCAGTTGCCAGTACGCGCGTACTATCACCCTGGCTGGCGTCATCGAGGAGGTTCCGATTCTCCCTGTCGAGACGCGGCAACCTTACATTAATTGCCGTAGGCAGTTTACGACGTGCGAAAAGACGATACGGCACCAGCCGTACCAGCGCAGCCGTCTTACGGCCGACCAAGAGATGCTCAGGTACGAATCTCCGATCTCATTACCAAACTACTCGTTGATGTCGGAACAGAGCATTCAATTCTCACCTCCTCCATCGTCTCATTATTCACCGCGAGTTGAGCTCGTCAGCCCTGTATCACCGGTGAACCCATTAGCGTCCTATTACCCGGATAGTCCTAGCTCGATGGTCTACGGCGCCAGGGACGATAGCGAGGATGTGAAGCCGTCGCTGACCAACATCTACGCGACCCTAGAAAATATATCGCCGTCGGCCGTCCCGTGCACACAGTACACAGTGTCGCAACAGCAGGAGCCGTTGTCGACTTTTTTGAGGATTTCGGATCCGTTTGATGCCGAGcTCATTCATCTGTTATCCCCAAAGAGCGAACCGACCTTCACTTCATCCACCTGCCAGTACGAGGATCTCTTGCCCCTTCCAACCCCACCGTCTTACCCAGTCAGCGAGCCCCGCAATGTGAGCAATAACTTAAACAGCGGCAGCAACGAGCAACACTACTGGCCTACAGCGATGAGCTTTGATTGTACTGGCACAACGATGACGTCGACCTACAGTGGTACCAATACAGGCTTCTCGAACCAGAGCAACATTCCAACGTCCTCTCCGTCCTGGACGACCAATTCGCCCAGACCAGCCAACGAGGCCCAGCTGTGCCCATGCTGCGGCACAATTAAGTCGCCACTGTGGCAATCAAACGGCAACATCATGTTTATGTGTATGCACTGCAAGGGCATGAACGACATGAAGAAGATGCAGGAGGAGAGGGCGAGGTCTAAACAAACTAATCAAgagaCTGATAGCAGAAAAGCACCTAGTAATAAATGCATGAATTGCGGTACTACAACGACTACTCTTTGGCGGCGAAACAGCAATGGCGAGCACGTTTGTAACGCGTGCGGACTGTATCATAAACTTCGAGGAGTGAACCGGCCATTGAGCATGAGTAACAAAAGTATcgcaaaaagaaagagaaagccTAGGAGTTTTGGAACTGAAAATAATGGTAACGGCGTGTCAAATGCAATCAGTAACGAAGACAATGCCAAGAGATTACTCGGTAGGTGTCATGatcagtaa
Protein Sequence
MHSNIKCEAEWGSDSSERVSPVPERTSCQYARTITLAGVIEEVPILPVETRQPYINCRRQFTTCEKTIRHQPYQRSRLTADQEMLRYESPISLPNYSLMSEQSIQFSPPPSSHYSPRVELVSPVSPVNPLASYYPDSPSSMVYGARDDSEDVKPSLTNIYATLENISPSAVPCTQYTVSQQQEPLSTFLRISDPFDAELIHLLSPKSEPTFTSSTCQYEDLLPLPTPPSYPVSEPRNVSNNLNSGSNEQHYWPTAMSFDCTGTTMTSTYSGTNTGFSNQSNIPTSSPSWTTNSPRPANEAQLCPCCGTIKSPLWQSNGNIMFMCMHCKGMNDMKKMQEERARSKQTNQETDSRKAPSNKCMNCGTTTTTLWRRNSNGEHVCNACGLYHKLRGVNRPLSMSNKSIAKRKRKPRSFGTENNGNGVSNAISNEDNAKRLLGRCHDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01467634;
90% Identity
iTF_01467634;
80% Identity
-