Taur024199.1
Basic Information
- Insect
- Torymus auratus
- Gene Symbol
- -
- Assembly
- GCA_900474315.1
- Location
- UXGD01007840.1:2212-8885[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.1 3.2e+02 2.8 0.1 1 12 312 323 312 332 0.82 2 15 6 6.2e+02 1.9 0.1 3 23 343 366 342 366 0.86 3 15 0.0028 0.29 12.4 1.5 2 22 388 408 387 408 0.95 4 15 0.26 27 6.2 1.0 1 23 417 440 417 440 0.87 5 15 0.0028 0.29 12.4 4.2 1 20 449 468 449 470 0.94 6 15 0.16 16 6.9 2.0 3 23 480 501 479 501 0.96 7 15 0.072 7.4 7.9 3.8 1 22 511 532 511 532 0.96 8 15 1 1.1e+02 4.3 0.1 1 12 659 670 659 680 0.77 9 15 3 3.1e+02 2.8 5.4 1 23 688 711 688 711 0.95 10 15 0.017 1.8 9.9 1.1 3 22 722 741 721 741 0.95 11 15 8.8e-06 0.00091 20.2 1.6 3 23 751 772 749 772 0.95 12 15 0.094 9.7 7.6 0.5 1 21 783 803 783 804 0.94 13 15 0.037 3.9 8.8 8.1 3 23 813 834 811 834 0.96 14 15 0.0034 0.35 12.1 2.6 1 21 884 904 884 905 0.95 15 15 1.2e-05 0.0012 19.8 1.7 1 23 913 936 913 936 0.98
Sequence Information
- Coding Sequence
- ATGTACGTAAATGAGATTATATTTGTACTAAATGgtaaaGATTTGCTAACgaagaaagtagaaaataaggaaaaaaaggcagccacaaaaaaaattgaatcgatAAGTTTGGaaattgaagtaagaaaaataagaaatactgcCAAATCAAGCAAAAATCAAAAGGAGggaaaaaatgttacaatcaCAAAGGAAAAGGATCCGCTTAATGTCACCGTTACAGCAGAGGAAAAGGATCCGCTTAATGTTACCGTTACAGCAGAGAAAAAGGATCTGCTTAATGTTACCGTCACAGCAGCGGAAAAGGATCCGCTTAATGTTACCGCTTCAGCAGAGGAAAAGGATCCGCTTAATGTTACCGTTACAGCTGAGGAAAAGGATCCGCTTAATATAACCGAATCTAAACAAAGTGATCAACTGGATGTTACAGAagagagagatcCTCTGAACCTTGATGAAGCAAGTAAAAGTTGTAGTATATCAGATTCAATGTCACTCGAAAAAGATCCCCTGGACTTTGACGAAGATTCCGTACAacaatcaattataaaagaagaaattcagATTGCTGGTGATTTCGACTACCTAGTACTGACGGACTGTTCAAgtatgGATACATTATCAACAAATGAAATGATTACAATGAGAAGCGCAAGTGAGCCTCCTGAAAAAATtccagagaaaaaaaagagaaagaagccCAGTACGAGTACGAGTAAAAGTAAGAAAACGAGTAAGGATCCGAGTACGAGCAAAGTAGTAGCAAAGAaggttaaaaatgtaaatacagaAAAGATTAAGAAGAAGCCTAAGAATTTATCAgTATTGGGTCAACAGACGGACTTGCTCTGCGCAAATTGCGGCATCCTGGGCCACGAGTACACCAGAGAGCACGGGTTCTACAAGTGTGTGACGTGCCAGGCCGACCTCTTCTACCGCTGCAAGGTCTGCAACGGCGAGTTCAATCGCGGTGGCGCCATCTACCACGTGAACACCATGTGCATACCTAAGATACGCGAGAAGGCATGTGACTTCCCCAACTGTCGATTTATCGCCAGCGACAAGGCCACGATGATACAGCACCAAAGAGCCGAGCACAGCCTCACGGCGATACCCGGCGAGATGCTATCGCTGGCGAAGAAGGGTCTGCTATCTTACGTAAGCTGTCACAGCTGTAACAAGCTCTTCAAACGGCCGACCTTCCTGGCGAAGCATCTGAAGACCTGCGGCAAGGGTGGCCGTGAGATATTCAGGTGCTCCAAGTGCCCGTACAAGTCGCGTAGGCGTGACCTGACCATCGATCACGAGACCAACGTGCACAAAGAGATCGACCTCAGCGAGTATCACAAGTGCCCGAATTGCGACAAGCGCTACAAACACGAGAAGCACATGAGGGTACACTACGAGCAGATCTGCCAGAACAAAGTGCAGAACAATTGCGAGCACTGCAATTACACGACGTTCGTCAAGATATACATGGTGAGGCACCTGAGGGTCAGGCATCCTGAACTTTTCCCCGATGACAACAAGTTCACCTGCCGACTCTGTGGCAGGCGATGTTTCACACTCAGGCAACTGAGCTATCATCTCAGGAGGAACAAGTGCCCCAAGaaagttactttaaaaataatcttttcgtTTGTTCcagctttattaaaaaacaagaaagatAAAAAGGGGACTAATGTAAAAAGAGATAGCAAAAATCTCACAGACAGTGACGCCAGTGctcatgaaatatatattaaggaAGAATATATTGAGATTGAAGAACCTTTCCCTATTATCGAGGACAGCCTTATTGACGTTTCAGAAAGTAAAATTGAAGATAAAAGTACTGAAGATCCACTAAGCAAAGATGGTTTAGTCTACAATGGCTACGTGCACCTGTACTGCGTCACGTGCAAGGATCGCGCGCCCCCTACGATTAAAAGCCGCGTGGGCACGTGTCCGCGCTGCTCCTGCCTCTACCATTACCAGTGTCCCACGTGCGCCAAGGTCTACGCCAAGGGCATCTCCGCTTATAAACACGCACGCAACGTATGCGGCAAGCTGCCGCGTCATCGCTGTCCCCACTGCCCATTCGCCAGCTACAATTCCACGACCACGTCCGTACACATAAAGCACCGTCACACCCACATCGATCCGCGCGACTATCCGGCTTGTCCAAGCTGCGGCAAGCGCTACAAGCACGTGAACAAGATGCGCACCCACCTGAAGACATGTGGTCAGCGCAAGGTGAAGTTGGACTGTCCCCACTGCGAGCTCAAGTTTGCCACTAGCTACAATCTGAAGAAGCACCAGATGATTAAGCACCGGGACACCATCGATGAGCAGCAGTCCATGCACGTATGTCCCAACTGCTCCAAGATTTATCTCTACAGAACGAGCCTCGAGACCCACATCAAGCAGGTCTGCGGTCAGAAGACCGTGCATTGCTATCACTGCAAGCTGCACACTGCGAACAAGAGGAATCTGACGAAGCACATGAAGAGAATGCATCGGGAATTGTACGAGGGCAGCGAAGATATTAATCCAAGGTTCCTCTCATGGCGCTCGAAGCTCATTCCCGAGCGTCTGACCCAGctgcaacagcaacagcagcagcagctacagcagcagGGCGTCGAAATGGCAGGTCAGCAGCGTTTTCCCTGCCCCGATTGCAGCAGCGTCTTCAGCCGCAAGTGTAATCTCTACTACCACCGGAAGTATGAGTGCGGCCAGCCGCCACGTTTTCAGTGTCCATATTGCCCGTACCGCACGCGACACCAGTCCAACGTGCGCGCCCACGTGCGTCGCATCCACGCGGGCAAGGACGTCTTCTTCATCGATGTCGGGCTGCAGCAGCCGTTCGATATCGTCTGA
- Protein Sequence
- MYVNEIIFVLNGKDLLTKKVENKEKKAATKKIESISLEIEVRKIRNTAKSSKNQKEGKNVTITKEKDPLNVTVTAEEKDPLNVTVTAEKKDLLNVTVTAAEKDPLNVTASAEEKDPLNVTVTAEEKDPLNITESKQSDQLDVTEERDPLNLDEASKSCSISDSMSLEKDPLDFDEDSVQQSIIKEEIQIAGDFDYLVLTDCSSMDTLSTNEMITMRSASEPPEKIPEKKKRKKPSTSTSKSKKTSKDPSTSKVVAKKVKNVNTEKIKKKPKNLSVLGQQTDLLCANCGILGHEYTREHGFYKCVTCQADLFYRCKVCNGEFNRGGAIYHVNTMCIPKIREKACDFPNCRFIASDKATMIQHQRAEHSLTAIPGEMLSLAKKGLLSYVSCHSCNKLFKRPTFLAKHLKTCGKGGREIFRCSKCPYKSRRRDLTIDHETNVHKEIDLSEYHKCPNCDKRYKHEKHMRVHYEQICQNKVQNNCEHCNYTTFVKIYMVRHLRVRHPELFPDDNKFTCRLCGRRCFTLRQLSYHLRRNKCPKKVTLKIIFSFVPALLKNKKDKKGTNVKRDSKNLTDSDASAHEIYIKEEYIEIEEPFPIIEDSLIDVSESKIEDKSTEDPLSKDGLVYNGYVHLYCVTCKDRAPPTIKSRVGTCPRCSCLYHYQCPTCAKVYAKGISAYKHARNVCGKLPRHRCPHCPFASYNSTTTSVHIKHRHTHIDPRDYPACPSCGKRYKHVNKMRTHLKTCGQRKVKLDCPHCELKFATSYNLKKHQMIKHRDTIDEQQSMHVCPNCSKIYLYRTSLETHIKQVCGQKTVHCYHCKLHTANKRNLTKHMKRMHRELYEGSEDINPRFLSWRSKLIPERLTQLQQQQQQQLQQQGVEMAGQQRFPCPDCSSVFSRKCNLYYHRKYECGQPPRFQCPYCPYRTRHQSNVRAHVRRIHAGKDVFFIDVGLQQPFDIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -