Basic Information

Gene Symbol
Hivep1
Assembly
GCA_900474315.1
Location
UXGD01008572.1:1-5416[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0012 0.12 13.5 0.6 2 23 156 177 155 177 0.97
2 8 0.017 1.8 9.9 2.1 1 21 183 203 183 207 0.86
3 8 1.3e-06 0.00013 22.9 1.6 1 23 751 773 751 773 0.99
4 8 2.1e-05 0.0021 19.1 4.4 1 23 779 803 779 803 0.92
5 8 7.5e-07 7.8e-05 23.6 0.3 2 23 1187 1208 1187 1208 0.97
6 8 1.5e-05 0.0016 19.5 3.0 1 23 1214 1238 1214 1238 0.92
7 8 0.046 4.8 8.5 3.1 1 23 1259 1283 1259 1283 0.93
8 8 1.9 2e+02 3.5 2.7 1 19 1408 1426 1408 1431 0.93

Sequence Information

Coding Sequence
ACTCACAGCTTGGCAATGACTGATCCGCAATTGGCAAATAGCAACCATAACGGCAACAACAACGGGACCGGCGGTGGTAGCAGCACCAATAACGACCACAGTCAGTTTAACAACGGCGCTGTCAAAGGCGCTAATAGCACTGGCAACGGCACCTCTGCTAGTAGTAACAACTGCAGCAGAATCCCGAATCCCAATacccccaccaccaccaccactaccatcACCATTACTAACGCCACCACCACTACCGCCACCACTACaactaataataacaacaataacaacactgctaacaacaacaataacaacaacgaTGGAGAACCAAAGTACCTACACAAGAAGTTCAAGAAGATGGCGACAAGCGAGGTGGCGAACGAGGCGATACAGGACGATACCCCGCTGTTGGCGAAGGAAGCACTGTTTGAGCTTGGTCCTGAGGCAGCCAGCTCCGGCAAATCCGGCAAGGTCTGTCCTTACTGCAAGCTGTCCTGCGCCAAGCCCAGCGTTCTGCTGAAGCATATCCGGGCACACACGAATGAGCGGCCTTATCCATGCGTGCCTTGCGGATTCGCCTTCAAAACCAAGTCCAACCTCTACAAGCACTGCAGATCCCGGGCCCACGCCATCAAGGCTGACAACAGCGAGGCCGTCAAGGTACCGTGTACATCCTACGCCTCATCAGGCTCTCGGCTCACCGACGTCCTTGGTCTTCAGATTCAGTTCTCCGAGGATTCTGACGTTAGTATGTCGGACAGCGCAAGTAACGGCACGGGCACTCCGCCGCCCTCGGTCCAGGCCCAGCGGTCGGCCTCCAGCCCGAGCCCTAGCTCTGGGGCTGGGACCCGCgctgttaaaatttataagccCAAGTTCCACACGGCGCTGCAGCAGTGCATCGAGCCGAGCCCGCCACCGCGGCCCAACGCCGTGCAACTGCAGGAGCACATCGAGCGCATTATTAGTGACAACCAAGCCATCGTTGAAGCGAGCGACCCGCGGCTGCACAAACTATTGCATCGGCAGCAGAGCCTTGCCGAGCTGACGGCCCGGGCGGCCGAGCCTCGTAAGCGATGCCGCAGCGAGGGCGCACCCGAGAGCCCGGACCGCGAGGTCGCCTCGCCGCCCGGACCTCTCGTGGCCTCAGGCCCGTTGCCCTCACCCGGCCCGCTGCTTGGCACAACGCGACTTGTCCAGGAGCCCAAGCGGCCGCGCCTTGAGGAGCAAGCCCCCCCGCGGCCGAACGCGCGGCTCGCCGCCCTGCAGATGTTCGGCGGCGAGGTGCGGATCCTCGACGGAAGCGGCGCCAGCAAGACGGTCCGCATCGAGCCACGCGGTTCACCAGCCGAAAGCATACCCAGCCAACCCGGACCTGAGCTCGCCTCTGTAGTCGTGCGCTCGGGTCTGCATTCGGGTGGTACGATATTGCACAAGACTGCCGGACCACCGGCGCCGACTGAGCCGACGCGCGCATGCCTGTCCCTGACGGGTATTGCACCCCACATAGCGCCACCGAGACTGGCACCAAGCATCGGCTACCTCAAGCCCGGGAGCATCCTCCACGCAGGTCGGCTCATCCCGTATGTGCCGGGTATGCCGGGCCCGGAGAGCCTCGGGCCGCCTTTAGACCTGGCGGTGGAGTCGGGTTTGCTGACCGGCTCGGATGCACCGCCAGCCGCCGGGGCCCGATGCCGCAGTCCTGAGCAGGCCCCGGCGAGCAAGTTCCTTCGACCGAGCTCTCTGCCGCTAAAGCCTGGCACGTTCACGCCCAAGCGTCACCACGGCATCACGCCTACGGCCAACACGCTGCCGCTCATCAGCCCTGAGACGCCGCGGCCGAAAAAGTCGTATGGGCAACTGTACTTGAACGGGCACGCCTACACCTACCTCGGACTCAAGTGCTCTACGCGGCTCTTCTACTGCACGCTCAACCGGCCCCAGCCCATGTACGTGACGCAGCAGCACGGGCTCTCTATGTACTCCAACTGGAAGATCTGTAAGGAGGCGCCGTCCGAGCTCGAGCTCGCGCACTACGACTCCCGGCACCGGTCGCAGGGCTACACGCTCGCCAGCTCGTGCAACGAGGGCATCCTCACCCACTCCACGCAGCGGCCGAGCACGCCGAGCAGTCCCGACAGCGGCCTCGAAAGCGACAGCCAGGAGAGGCGGCACCAGGCGCGTGTCAAGATCTTCGACGGTGGCTTCGAGAGCAACGAGGACTACACCTACGTACGCGGCAGAGGTCGTGGCCGCTATGTCTGCGAGGAGTGCGGGATACGCTGCAAGAAGCCTTCTATGCTTAAGAAGCACATCAGGACACACACCGACGTCCGACCGTTCACTTGCAAGCACTGCGCATTCAGCTTCAAGACCAAGGGCAACCTGACGAAGCACATGAAGTCCAAGGCCCATTACAAGAAGTGCGTCGAGCTGAAAGTGCTGCCCGTTCCAACGTCCGTATGCGACGACAACATCGACAAGGAGGCTCTTAGCAGGCTGGCCTTGGCTGGGGCCTGCACCGACGATACTTCCTCTTCCGAGGAGGAAAGCGAGGGCGAAGGCGATGCCGAGAGCGACGAGTCGGGCAGCGAGGAGCACGAAGCGGCCCAGGGCCTGCTGAGTCTCGCGCAGCCGAGCGCCAGCCGGCTGCCCGGACTGTTGTCCTCGGCCAGACCCGCGACCTACCCCTACGGGCGCAGCCTGCTGTGCGCACCGGAAGGCTCAGGCCCGAGTCCGCAGCCGAGCCCGCTCCCAGCCACGCAGCGTTACTGTCTCGGCCCGAGCCCGACTCCGCTTCCGGGAAACGAGTCACGACTTAGCGTCATCCGCTCCTGCAGGCGGGACGAGCCAGCCGCGCCCATTGACCTAACGGTCAAGCAGCAGTCCGAGCCTCGGCAGCGCGGGAGCCCGGGCGAGATCCTCGCAGGCGTGACGGGTCCAGCGCTCTTGCAGACCATCGTACAGCAGATGGAGAGGCTGCCGATCCAGGGTCGCGCCCCGGCCTGCGAGCCGCCCGCCGAAGGTCGCATGCTGCAAGCTTACCTCACCGAGCGCCACATGATGGACAGCAAGATGAAACAGCTTTACCGCGTAAAGAGCACCCTCGAGCAGCCGGAGAGACTGGAGAGGCCGGAGAGACCAGAGAGGTTGGAGGGCTCGCCCCGAGTCGAGAGCCCACTGACCAAGCTGGCGGGCAAGCCGCGTGCGGAGCCTCCGGAGCTCGAGCCCCACGCGGACCGGGAGCAGCTCCACCCGTGTGGCCACCAAGTGCTGGGACCGACTCCTCACCTGCTCAGCGCCGAGGCCGTGAAGCTGCCTCTCTTGCCTCAGCCGCCCCCGCCTCCGGCCCCATCTACGCAGCCGCTCCCGTCTACGGCCCCTCCTGGGCAGCAGCAACCACCGCCAGCCGCGCGCAAAGTTGTCGTCGGCGGTAATGGCTTCGGCTCGCTGTCATCCTCGGCCCACGGGCTTGCTCACACAACCACGTCTGCTCCGGACTTTTTCCAACCTTCCAGCACCAGTGTAGCAAATTACGTGGGaatGGCAGAAGACAGTCACAACGTCTGCAACATCTGCAATAAAGTATTCAGCAAGCCAAGCCAGCTACGACTGCACATTAACATTCATTACATGGAGCGGCCATTTAGGTGCGAAAGCTGCGGAACGTCTTTTCGCACAAAGGGGCATCTTACTAAGCATGAGAGGTCCACTCTTCATCACAATAAGGTGAGCATGACATCCACTTTTGGAGCTGCTACAGCGAGTAATCCTCGACCTTTTAAGTGCACTGACTGCTTATCAGCTTTTCGTATTCATGGGCATTTAGCTAAACACCTTCGCAGTAAAATGCACATTATGAAACTGGAATGCTTGCGTAAGTTGCCGTTTGGGACATATGCTGAAATGGAAAGATCTGGCGTGAACCTAAATGACATTGATACTACAGACTGTGATACTAGTCTTACTAGTCTTCAAATTATGGCTCAAAAACTTTGTGAGAACGATCCCGAAAAATTGGGACAGTGGGAACCTGGCATGATTCCAAATCATACAGCTAGTAGCGGAGAAACATCATCTGATGAAGCCGATGCAAATCCTTCGAGGTCTGTAACTCAAAGTAATGAGGCTAACATCTCGCAAAACTACCATATGTCAGAATGTGGCAAACCGAGCCATGCTAATGCAATCGATGTTAGGATAGATGAGGTGAGAACAGGTTCTATCTACAACTGTCACTTGTGTCCAATGTCCGTACAAAGTTTAAGTGAACTCCATGTACATTGCTTCGTGGAACACAATATGGAGTCAAGTAACACCTCCACAGTTTACCCTTCTcatctgaaagaaaaaataaaagaaaaagaaaatattcataatttaaaaggTCTTGATGACTTTACAATAAGGGAAAGTGAAAGTGGACAGAGAATCGATACTACTTAG
Protein Sequence
THSLAMTDPQLANSNHNGNNNGTGGGSSTNNDHSQFNNGAVKGANSTGNGTSASSNNCSRIPNPNTPTTTTTTITITNATTTTATTTTNNNNNNNTANNNNNNNDGEPKYLHKKFKKMATSEVANEAIQDDTPLLAKEALFELGPEAASSGKSGKVCPYCKLSCAKPSVLLKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHAIKADNSEAVKVPCTSYASSGSRLTDVLGLQIQFSEDSDVSMSDSASNGTGTPPPSVQAQRSASSPSPSSGAGTRAVKIYKPKFHTALQQCIEPSPPPRPNAVQLQEHIERIISDNQAIVEASDPRLHKLLHRQQSLAELTARAAEPRKRCRSEGAPESPDREVASPPGPLVASGPLPSPGPLLGTTRLVQEPKRPRLEEQAPPRPNARLAALQMFGGEVRILDGSGASKTVRIEPRGSPAESIPSQPGPELASVVVRSGLHSGGTILHKTAGPPAPTEPTRACLSLTGIAPHIAPPRLAPSIGYLKPGSILHAGRLIPYVPGMPGPESLGPPLDLAVESGLLTGSDAPPAAGARCRSPEQAPASKFLRPSSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRLFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPSELELAHYDSRHRSQGYTLASSCNEGILTHSTQRPSTPSSPDSGLESDSQERRHQARVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPFTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELKVLPVPTSVCDDNIDKEALSRLALAGACTDDTSSSEEESEGEGDAESDESGSEEHEAAQGLLSLAQPSASRLPGLLSSARPATYPYGRSLLCAPEGSGPSPQPSPLPATQRYCLGPSPTPLPGNESRLSVIRSCRRDEPAAPIDLTVKQQSEPRQRGSPGEILAGVTGPALLQTIVQQMERLPIQGRAPACEPPAEGRMLQAYLTERHMMDSKMKQLYRVKSTLEQPERLERPERPERLEGSPRVESPLTKLAGKPRAEPPELEPHADREQLHPCGHQVLGPTPHLLSAEAVKLPLLPQPPPPPAPSTQPLPSTAPPGQQQPPPAARKVVVGGNGFGSLSSSAHGLAHTTTSAPDFFQPSSTSVANYVGMAEDSHNVCNICNKVFSKPSQLRLHINIHYMERPFRCESCGTSFRTKGHLTKHERSTLHHNKVSMTSTFGAATASNPRPFKCTDCLSAFRIHGHLAKHLRSKMHIMKLECLRKLPFGTYAEMERSGVNLNDIDTTDCDTSLTSLQIMAQKLCENDPEKLGQWEPGMIPNHTASSGETSSDEADANPSRSVTQSNEANISQNYHMSECGKPSHANAIDVRIDEVRTGSIYNCHLCPMSVQSLSELHVHCFVEHNMESSNTSTVYPSHLKEKIKEKENIHNLKGLDDFTIRESESGQRIDTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01468291; iTF_01467434;
80% Identity
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