Basic Information

Insect: Torymus auratus
Gene Symbol: mecom-b
Assembly: GCA_900474315.1
Location: UXGD01000753.1:41020-46808[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.015 1.6 10.1 0.5 2 23 36 58 35 58 0.92

2 8 0.00018 0.018 16.1 1.2 1 23 94 121 94 122 0.91

3 8 5e-06 0.00052 21.0 2.6 1 23 128 150 128 150 0.95

4 8 3.1e-05 0.0032 18.5 5.0 1 23 156 178 156 178 0.99

5 8 0.029 3 9.1 0.5 2 21 186 205 185 206 0.94

6 8 2.6e-08 2.7e-06 28.2 1.7 1 23 623 645 623 645 0.99

7 8 3.8e-07 3.9e-05 24.5 1.7 1 23 651 674 651 674 0.97

8 8 7.8e-06 0.00081 20.4 3.5 1 23 680 702 680 702 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.015	1.6	10.1	0.5	2	23	36	58	35	58	0.92
2	8	0.00018	0.018	16.1	1.2	1	23	94	121	94	122	0.91
3	8	5e-06	0.00052	21.0	2.6	1	23	128	150	128	150	0.95
4	8	3.1e-05	0.0032	18.5	5.0	1	23	156	178	156	178	0.99
5	8	0.029	3	9.1	0.5	2	21	186	205	185	206	0.94
6	8	2.6e-08	2.7e-06	28.2	1.7	1	23	623	645	623	645	0.99
7	8	3.8e-07	3.9e-05	24.5	1.7	1	23	651	674	651	674	0.97
8	8	7.8e-06	0.00081	20.4	3.5	1	23	680	702	680	702	0.99

Sequence Information

Coding Sequence: ATGGGCTGCGGCGGCGCACGCAGGACGCGATTCGTAAcTTCGCAACATAGTGGTGCTTCTCAACACGCTGACGAAGATAGGGAAGACGACGAAGACGGAGAAACTCGGTGTACAGTTTGCGACAAGCCGTTCCAGGATATTGAAGTACTGAACAATCATCTGGTGATCTGTCACCGATATCCAGCGCGCGAACATTGCTGCTCGTCCTGTCCGAGTGCGTACGCCTGGCGGCCTCTACTAGTCCGCCATAGGGCTATTGTTCACGGCGACGTACGCAAGTACCCCTGCGAGAACTGTTCCAAGCCGGACCATCCGCAGGTTTTCACTGATCCATCGAATCTTCAGCGCCACATCAGGGCTCATCACGTTGGAGCGCGTAGTCACGCGTGCACCGAGTGCGGCAAGACATTCGCTACGAGTTCAGGACTAAAGCAGCATACTCACATACACAGCAGTATCAAGCCGTTCCAGTGCGAGGTTTGCTTCAAGGCGTACACGCAGTTCTCCAATCTCTGTCGGCATAAGCGCATGCATGCCAAATGCCGCATGCAGATCACCTGCGCCAAGTGCAACGCCCAGTTCAGTACCGTCACCTCGTTATCGAAACATAAGAGATTTTGTGACTCGACAGCGGCGCCGACGTCCAGTTCAGCTTCTAATATGCCTCAACCGCAGCCGAATCCTTTCCTATTCCCGCGTCAGCCGTTACCCTTCTATCCTCCGAGTATCATAGGCCATTACTCTGCCTCGCTGTTGCGCAGCGCGAATAATTTGCTAGGGTTGCCGGGACTACCGGTGCTATTTCCACCAAAGCCCGACGAGGCTGCCGAACGACGTTCCAGTGAACAGCAGCAGTCGCAGCAACATCAGCAACAGCGCCCGGAGAGTCCTAGACAAGACAGATACTCGCCCCCAAGAAGTTCTTACTCGATTCAGGCGGCTCAGCAGCAGGTGCAGTCAAACGCCAGTAAAGTGTCACCTTCGGCTGCCGAGGAGGCTACATCCAGTCTGAGACCCTCACCTGCTCGACCGCCTCCAGCTCAGCTGGAACGCGAGGAGTCGAGTAGTCCCAAAAATATGACTACACAACCACAGCAACAAGCGCAGAAGCGTAAACATCGTCACAGCTCTGAAGAAGCCGAGGATCAGCAGTCGACATCTGGTTCAGAGCAGCCTCTTGACTTACGCGTGCAAACGAAACGCCGAAAGAATTCTGACGCACAACCAACAAGTAGCCAGGAAACTGATCCAGAGATCCAATCGGAACTTGAACCCACTCCAGAGAAAAGACGAATCGAATACAGCAGTCCCGAGGAGCGAGCGACGCCCCAATCACGACCCTCTAGCCGAGTTAAGAGTGAGCAGCAGCGCAACGAGCGTGAACCATCGGAAACCAAGGACATGAGCAGCCCGGTCATGCGCAGCAACCACCAGGCCCCGCAAGCGGAAACGCGGCAACAACAGCagccccagcagcagcaaccaaCAGTTGAAAGGACGCCAACTCCTCCACCTCCATCGATGCCGCACATGGCGTATCCAAGGCCTATCCACCCACTGTTCATCGAGTCGATGAATTTGTACCGCAACGGTCCGGGCTCTTTTCCCAGCTTCCCCGGAGCAGTGCCGAATGCAGGTAGCCCACTTCAGCCATTGCCCTCGTTCGGGCCCTCCCGCGGCTTACCCTTCCTTGGCTCTCTGATGAATGGTCTTGGCGGACCCAGACCCGGTGCCGCATACGACGTCCTCCCGCGACCCCCGTTCGGTAACTTCGCTGGCGTCAAGCCCTTCCAGGACTCGGTAATGGGCCACCATCCTCAGTCTGGCGGACCCTTCGCCGCGGGTCCCGGCAAGAGCAAGGACCGCTACTCATGCAAGTTCTGCGGCAAGAACTTCCCGCGCTCAGCAAATCTTACGCGGCACTTGAGGACTCACACGGGCGAGCAGCCCTACAAGTGCAAGTACTGCGAGCGTAGCTTCAGCATCTCCAGCAACCTGCAGCGCCACGTGCGCAACATCCACGACAAACAGCGGCCCTTCAAGTGCCCCATGTGCGAGCGCTGCTTCGGCCAGCAGACGAATCTCGACCGGCATCTTAAGAAACATGAGGCGGACGATGGTAGCGGTGTCGTTTCGGTGGCAGATTCAGCGGATAGTAGCAACGAGAACGAGCGCGAAGAAACTTCGACGTACTTCGACGAGATCAGGTCGTTCATGGGTAAAGTGACTTATGGAGCCGATAGCCCATACGGTCTGCCCCCGCATCATCCAGCTTACCTGCCAAGTAGACTACGAGAAGTCCATGGGGTTCAGGATCTTATGGACGGCGTTGTCGGCAAGAGCAAGtatgacgacgacgaggagagcGAGGATCGGGTGTCACCCCTGGAGCAGGCTGACGTGTTGTCGCCCATTGATCCCAAGGTATCCTCACCCTCGCAATTTGATCTGAAGCTCAGCAGTAAGTGCGAGCTGCTGAACAACAACACAGCCGAGCCGGTCATCGAAATCTCGACATAG
Protein Sequence: MGCGGARRTRFVTSQHSGASQHADEDREDDEDGETRCTVCDKPFQDIEVLNNHLVICHRYPAREHCCSSCPSAYAWRPLLVRHRAIVHGDVRKYPCENCSKPDHPQVFTDPSNLQRHIRAHHVGARSHACTECGKTFATSSGLKQHTHIHSSIKPFQCEVCFKAYTQFSNLCRHKRMHAKCRMQITCAKCNAQFSTVTSLSKHKRFCDSTAAPTSSSASNMPQPQPNPFLFPRQPLPFYPPSIIGHYSASLLRSANNLLGLPGLPVLFPPKPDEAAERRSSEQQQSQQHQQQRPESPRQDRYSPPRSSYSIQAAQQQVQSNASKVSPSAAEEATSSLRPSPARPPPAQLEREESSSPKNMTTQPQQQAQKRKHRHSSEEAEDQQSTSGSEQPLDLRVQTKRRKNSDAQPTSSQETDPEIQSELEPTPEKRRIEYSSPEERATPQSRPSSRVKSEQQRNEREPSETKDMSSPVMRSNHQAPQAETRQQQQPQQQQPTVERTPTPPPPSMPHMAYPRPIHPLFIESMNLYRNGPGSFPSFPGAVPNAGSPLQPLPSFGPSRGLPFLGSLMNGLGGPRPGAAYDVLPRPPFGNFAGVKPFQDSVMGHHPQSGGPFAAGPGKSKDRYSCKFCGKNFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPMCERCFGQQTNLDRHLKKHEADDGSGVVSVADSADSSNENEREETSTYFDEIRSFMGKVTYGADSPYGLPPHHPAYLPSRLREVHGVQDLMDGVVGKSKYDDDEESEDRVSPLEQADVLSPIDPKVSSPSQFDLKLSSKCELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01469960;
90% Identity: iTF_01468270;
80% Identity: -