Basic Information

Insect: Torymus auratus
Gene Symbol: -
Assembly: GCA_900474315.1
Location: UXGD01001744.1:23974-25974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00016 0.017 16.3 0.3 1 23 265 288 265 288 0.97

2 10 8.4e-07 8.7e-05 23.4 1.3 1 23 294 316 294 316 0.99

3 10 1.5e-07 1.6e-05 25.8 0.4 1 23 322 344 322 344 0.99

4 10 0.019 2 9.8 1.1 1 23 350 372 350 372 0.98

5 10 6.2e-06 0.00064 20.7 0.2 1 20 378 397 378 398 0.96

6 10 0.035 3.6 8.9 2.4 1 23 407 427 407 427 0.94

7 10 1.5e-06 0.00016 22.6 0.5 3 23 435 455 434 455 0.98

8 10 0.00015 0.016 16.3 1.4 1 23 461 483 461 483 0.98

9 10 0.0029 0.3 12.3 2.6 1 21 489 509 489 512 0.96

10 10 0.21 22 6.5 2.0 1 20 518 537 518 539 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00016	0.017	16.3	0.3	1	23	265	288	265	288	0.97
2	10	8.4e-07	8.7e-05	23.4	1.3	1	23	294	316	294	316	0.99
3	10	1.5e-07	1.6e-05	25.8	0.4	1	23	322	344	322	344	0.99
4	10	0.019	2	9.8	1.1	1	23	350	372	350	372	0.98
5	10	6.2e-06	0.00064	20.7	0.2	1	20	378	397	378	398	0.96
6	10	0.035	3.6	8.9	2.4	1	23	407	427	407	427	0.94
7	10	1.5e-06	0.00016	22.6	0.5	3	23	435	455	434	455	0.98
8	10	0.00015	0.016	16.3	1.4	1	23	461	483	461	483	0.98
9	10	0.0029	0.3	12.3	2.6	1	21	489	509	489	512	0.96
10	10	0.21	22	6.5	2.0	1	20	518	537	518	539	0.93

Sequence Information

Coding Sequence: ATGACGAACAACGCGCAGATGGTGGTGGAGGAACCGGAGGCGGACCATCCGCTGGAGGATGTCCAACTGACGGAGCTCAGGCCAGTCGAGCAGTCGCGAATCAAAGAGCTGGACGATGGCGACGTCACCGATGGACTGAGGGCGTTGAGGAGCTTCTCGAGGAGGCACGTGGACGAGCTAGAGCAATTTGGCGCCGGGTACCCGCTGAAGAGGAACGCGACCAGGTGGAAGCATCTCAACGGCACGAGCGAGTTCGGCGTCGACAGCGAGGACGAGGACTGCGGTAAGGATGTAAATAACGACGAGAGTACAAATGAGAAGGATAGGGAGGAGAGCCAGCCGGTGAAGgataaggaggaggaggagtattATGGAGTCAACGGGGATTTCGAGTACTTGGAGGAAAGGGAGGGCTACGAGATCTACGTGTACAAGCAGAAAGAGTCGGAGGGTTCGGAAGTCGAGTACGAGGCGGAAGCTGGcgaaaaggagaagaaaaagcAATCGAAGAATGTCAAGGTGTTTAGGGTTGAAAGGCTACCAACTAAAAAGGGCACTCGACCCAGGGGCAGACccagaaaaaagaagagaattgTCGGTAAGAGAAAGATGGTAGAGCAGTCTCCGCCCCCAGCCAGGGCCACGGAATCCCCGGATCTTCAGAAGAAGATACATGATATCATCCAGGCGAACCTCCTCATGGAGCAGGAGAACAACAACATTGTCGAGGACAGTCACGAAAAGGAGAAGGGCACGCCCAAGGGCAAATATGAGGACGAAGAGTCCAAGAAGTATAGCTGCCAAATGTGCGACGCGCGCTTCAAGGGCAGCGGCGGACTTCGCAACCACTACAAAGTGGTCCACGCCACGGGCCCGCTGTTCAAGTGCGACGACTGTGGCAAGGAGTTCCGGCTGAAGGAGCGCCTCAAGCTCCACATCCGCACTCACACCGGCTTCAAGCCGTACAAGTGCCCAGAGTGCGACAAGACCTTCGCCAGAGGTGGTCAGCTAGTCCAGCACCGACGCACCCACAGTCAGGTAAAGCCTTACAGTTGTGACCAGTGCTCCGGGACGTTTACCTGTGCTGCCAACCTGGCGCTTCACCTGAAGCGCCACAACGGCCAGAAGGACCACAAGTGTGACATCTGCGGCCGGGGTTTCGTGCGCAGGGACGCGTTGAAGAAGCATCTCGAATGCCTCCACCGGGACGTCAAGTCTTTCCTCTGCGTCATCTGCAACAAGACCTTCAAGGGACACCTGCCTCAGCATATGAGGACCCACGCGCAGGACCGGCCCCATGGCTGCGCAACCTGCGGCCAGCGTTTCGCACAGAAGAGCCAGCTGACCGTTCACCAGAGGACGCACTCCGGGCAGAGGCCATTCCGATGCCTTGTCTGCTGGCAGGCCTTCGCCCACTCGACGGCGCTGAAGCTCCACACGAGGCGGCACACAGGTGAGCGACCCTTCAAGTGCGCCGAGTGCAACGCCGGCTTCACCCAGCTGCCCCACTGGAAGAAGCACATGAAGTGCATCCACGGCAGGAACGAGCCATACTGCTGCCGCAAGTGCAACAACTTCTTCAGGATCAAGAACGAGCTAGAGGCACACGAGAAGGACTGCATAGCCGATGACAAGGACGCCGGCGACTCGGAAGGCAACTCCGTAGACGGGATGTCGGCGAGCGCGCTGGAGAAGTACCGGAACATGTCGATCGAGAAGATGAGGCTGCTCCTTGCCGTGCTGCTGAAGAGAATCTCCAAGCCCGAGAGGCTGGACGAACTGGGTTTTGGTAAGAGGCTCATCGACGAGGTCCTCGTCGACTCACTCGTCTCCGCGGGCAAGGAGGCGGTGAAGGCTATTGGCGTCGTCTCCGAGTTCGAGGCGCTCAGAACGAACCTCGCCGTCTTCCTCGAGTGGACCGTGCCGAAGGAGCACTGGGACACCTTCCGTAAGCTGAAGAAGACGCCGGAAGAGGTGCTCGAGACCCTCACCAACACGTAA
Protein Sequence: MTNNAQMVVEEPEADHPLEDVQLTELRPVEQSRIKELDDGDVTDGLRALRSFSRRHVDELEQFGAGYPLKRNATRWKHLNGTSEFGVDSEDEDCGKDVNNDESTNEKDREESQPVKDKEEEEYYGVNGDFEYLEEREGYEIYVYKQKESEGSEVEYEAEAGEKEKKKQSKNVKVFRVERLPTKKGTRPRGRPRKKKRIVGKRKMVEQSPPPARATESPDLQKKIHDIIQANLLMEQENNNIVEDSHEKEKGTPKGKYEDEESKKYSCQMCDARFKGSGGLRNHYKVVHATGPLFKCDDCGKEFRLKERLKLHIRTHTGFKPYKCPECDKTFARGGQLVQHRRTHSQVKPYSCDQCSGTFTCAANLALHLKRHNGQKDHKCDICGRGFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHAQDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCAECNAGFTQLPHWKKHMKCIHGRNEPYCCRKCNNFFRIKNELEAHEKDCIADDKDAGDSEGNSVDGMSASALEKYRNMSIEKMRLLLAVLLKRISKPERLDELGFGKRLIDEVLVDSLVSAGKEAVKAIGVVSEFEALRTNLAVFLEWTVPKEHWDTFRKLKKTPEEVLETLTNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01469095;
90% Identity: iTF_01465632;
80% Identity: -