Basic Information

Gene Symbol
ZNF236
Assembly
GCA_900474315.1
Location
UXGD01000353.1:36723-54372[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 6e-05 0.0062 17.6 3.2 1 23 175 197 175 197 0.97
2 27 0.00021 0.022 15.9 1.6 1 23 203 225 203 225 0.97
3 27 1.4e-06 0.00015 22.7 0.3 2 23 231 252 231 252 0.98
4 27 0.0018 0.18 13.0 0.2 2 23 259 280 258 280 0.96
5 27 0.0011 0.11 13.7 1.7 2 23 291 312 291 312 0.97
6 27 1.6e-06 0.00016 22.6 0.3 1 23 333 355 333 355 0.99
7 27 0.00079 0.082 14.1 2.3 1 20 361 380 361 383 0.96
8 27 0.00026 0.026 15.6 1.9 1 23 389 412 389 412 0.96
9 27 0.00035 0.036 15.2 1.9 1 23 421 444 421 444 0.98
10 27 2e-08 2e-06 28.6 0.4 1 23 537 559 537 559 0.99
11 27 1.2e-05 0.0013 19.8 3.2 1 23 565 587 565 587 0.98
12 27 3.9 4.1e+02 2.5 0.1 1 23 593 615 593 615 0.90
13 27 3.8e-05 0.004 18.2 0.3 1 23 619 641 619 641 0.97
14 27 0.044 4.6 8.6 5.0 1 23 698 720 698 720 0.98
15 27 1.6e-06 0.00016 22.6 0.6 1 23 726 748 726 748 0.98
16 27 7.8e-05 0.0081 17.3 1.8 1 23 754 776 754 776 0.98
17 27 4.8e-05 0.005 17.9 5.0 1 23 782 804 782 804 0.98
18 27 0.16 16 6.9 0.6 2 23 1089 1110 1088 1110 0.95
19 27 0.0045 0.47 11.7 4.0 1 23 1116 1138 1116 1138 0.98
20 27 0.0083 0.86 10.9 2.6 1 23 1144 1166 1144 1166 0.97
21 27 8e-07 8.3e-05 23.5 1.9 2 23 1198 1219 1197 1219 0.98
22 27 0.0012 0.12 13.5 2.9 1 23 1225 1247 1225 1247 0.99
23 27 8.1e-05 0.0084 17.2 4.6 1 23 1253 1275 1253 1275 0.98
24 27 7.5e-05 0.0077 17.3 1.8 1 23 1281 1303 1281 1303 0.98
25 27 2.3e-06 0.00023 22.1 0.4 2 23 1478 1499 1478 1499 0.97
26 27 1.8e-06 0.00018 22.4 1.6 1 23 1505 1527 1505 1527 0.98
27 27 8.9e-06 0.00092 20.2 2.6 1 23 1533 1556 1533 1556 0.96

Sequence Information

Coding Sequence
ATGAACTCCTCCAtgatgatgaattttatgcTGTCCGACGATGGCAGGACTCTACTGGCTGTGCAACAGGGGAAAGATGGAAATTTGGAGCTCCTGTCTGTTCCTGTGGCGGTCTTACCAAGTGAAAATGGTATTTCTTTGCCTCAAGCACTCAAGCTTTCAAATGGTGATACTACTTTAAATGAGctgaaCCTTCATGATGTTTCTATCAATATTCAGCAACCTTTATCTCCTACACAAGTAATAAAGTTAACACCTTCCGATCATCATACAGTTTCTGAAAAGAGATGTCAATCGGAAACAAACAGTTTTCCATTAAATCAATCTCCAcagtttaattttgaaaatctccAAAGTAGACCAGAACCTGTTTCAGAGAGACAAAAGACTGAATTAGAGTCTAATTTAGTTCCCAACGAGGCTCCTCTAAAACTTCATAAAAAGTCTCCCAAGAAGCATAGACGTAAGAGTGGAAGaccaaaaaagattattaaaaatgaagaagaagaagagCCAGCATGTTTTAAGTGTGATATTTGTGGTCAAGAGTTCAAAAAACAATATCTGATGCAAAAACATATGCATGACCATGCCCAAGAAAAACCTCACCATTGTCCAAAATGTCCTGCATCATTCAATGTACCAacGAATTTCACTCTTCACATGGCGACTCATTGCCTCAGCGATCCAAAATGTCCCGAGTGCGGTAAAAAGTTTGCTCGCATAGCAAGTCTCAAATCCCACATGCAAGTCCACGGAGTAGATGAGAATCTGTACTGCACCGAATGCGAAGATACTTTCGAGACAAAGGCCCAGCTGGAGGCCCATTTGAAGCTACACAACGAGAAATGGACAGCGGACGACTACCGGAGATGCAAGCTCTGCCGCAAGCAGTTTACCCAGCCGGTCCTCTACCGCCAGCATTTGCGCGATCACTACCGGACGCAGATGAAATGCGCGAGACAGACGAAACGCGGCATTCGGCACAGGACGGTGTACAAGTGCAGGATCTGCCTGAAGGTGTTTGAGAAGCCGAGTCAGCTCGCGCGACACATCAGGGTGCACACAGGCGAGAAACCGTATAAGtGCCATTTGTGTTACCGAAGTTTTTCGCAAAAAGGTTCCGTGAGGATACACATGTGGCAGCATAATGGGATCAGGCCGTACAGTTGCTCATTCTGCCATGCTCAATTTAGTCAAAAAGGTAATCTCAACTCGCACGTGCTCAGGGTGCACAGCGTTCAGAAGGGCGGGACGGTCTACCGTTGCACGCAGTGCCCTTGCATCTTCAAGAAGCTTGGCACCTTGAACGGCCACATGAGGCGGGCCCACGAGGGCAAGCCCTGCAACGACGAGCCGCCCGATAAggacgaagaggaggaggaggaggaacaaGAGGAGGAAGAGCAGCAGCCGATGGAACAAGATGAAATCGAAAACACAAGTCCCGAGGCGCGCGCGAAGGGTAAGGAGGCGGAGATGGATTTCGAGGATGGCTTTGTGGTGACGGACGAGGGTCAGAATACAGCGGTGGTGACGTTGCCTGACAAGGAGTCGAAAGGGAAGTTCGTGAAGATAAAGCAGcgttttgtaaataattctaGACAATACGAGTGCTCCGACTGTGATAAAGTATTCAAAAAGCCTTCCGATCTTATGAGGCATTTGAGGATACATACGCGCGAGAAACCCTTCAAGTGTAAAAAATGCGATCGATCGTTCACGCTGAAGTCGACGCTGCAGACGCACGAAAAGATTCACCGAGCGGAAAACAAGTTTCCCTGCGACGAGTGTAGCGTGGTGCTCTGCTCCGAAGAAGCCTATGACGCCCATAAAGCCGGCCACAAGGACGGCTACGAGTGCAAAATCTGCGACCAGCGCTTCCCGACTTTCGACGAGCTGCGCAGCCACACCGCCGTCCACTCGACCAATCGCAAGGATCGCAAAAAGGCGCAACCGCCCCCTGAGGTGCAAAACCTCTTGCCGAAAGTCGTGCTAAAGGAGCCGCTGGTACTCACGGAGACGAGCAACGGACTGCTCCACGCTCAGCCCAAGTACCGCAACGAGCTCGCCCACGGCAAGGGTAGGCCGCACAAGTGTCCCGCCTGTTCTGCCGGTTTCATGAAGTTCAGTCACTTGAAGCAGCATTATCGCAAGCATACCGGCGAGAGGCCGTTTACGTGCGATTTCTGTGACAAAGGTTTCGCGACTCAGAGCGCGTTGAAAGCTCACAACCGGACGCACGATTTGCTGAGGCCTTATCAGTGCTCCATTTGCAATAGTAATTTCACGACTCTGAGCAGTATGAAGAGGCATCAGGTGACGCATAGCAATAAGCGACCTTTTATGTGTCCGTATTGCAACAAAACGTTTAAAACGACGGTCAACTGCCGAAAGCACATGAGGGTGCATAAACAGGAAATCGCTCAGCAGcAATTAGAACAGGAAAAGAGACCACAAAAGGAATCACCTACGTcagataattttgataattcagTTATGTCTAGTAATATGAAAGTTACAATGACAGAaccaatttttattaacaaccCAGAAGTAACTTTCCAGCATGTTCCAACcaatttagtacaaaatttaaaCAGTCAAATTCAATCGACAGTTACACAGGATTCTTTTCCATCAGTGCCTTTAACGTCACAAAATATTCACATAACTACACaaaacaTACCCATAGTAAATTCTAACATAGGTACAACACAAACACTGCATGCTGATGAAAATGGTACTGTTACCCTTGCTAATTATACTGGAGATCAAATGCTTACATCTGAAAATATTAGAGAAATTGAAGAGACGTTAAATCAACAACTATACAGTATTGGAATGAATCTCGCATTAAACAATTCCACGAAAATGAATGAGGAGTGTAATAATACTACTTTAGAATCTCAAAACCCtcctattttaagtataatttatgataatggGAAAACTATGGAATCACCTATTAGTACATCAATCAATACAAATGTATTTGCTTCCCAGTTAGATAATTTCGACATAAATCAATTCACATTGCAGAATGATAATGAAATGGGTATCGGAATTTCTCAAATTAGTCCTGCAAATATAGCTAGCTTTTTATCTAATTCAGTTCAAGAAAATCCACAATTCACTTTACCATTAGTCTGTACTGACAGTGAGATGGATACAATACTTAAACAGAGTCTTGGAAAAAGTGAGGATCAATCAGTTGATGttgctaataaaaataataaatcattatttgaaGAAAGTAACCTTCAATGTCATATGTGCAATATTCAAGGCCTTACTGCAGATGATTTGAAAGAGCATTTAAAAACGCACCAAGGCAAAAGAGAATTCGAGTGCACTcactgtattttaaaattttgcactAGTGGAGGTCTAAGCAGACATATGAAAATACACGAAGTCCCAGAAAAACACAAATGCTATGAATGCAATCAAGAATTTCCTACAACTCTAAAACTAAGACAGCATATTAAAGAACATGTCAAACGTGAGCTAGCACTTAGAACTGGTACTGAAACTATCATTGACGATATCGAGATAAAATCTGATGAAGGAACTGGTAAAAGGAATAACAAATGTGCTTATTGTACAAAAACGTTCCGAAAGCCAAGCGATCTGACGAGGCACGTCAGGACGCACACCGGTGAACGACCCTATCAGTGTACATTTTGTGAAAAGAGTTTCGCCGTCAAGTGCACATTAGATTCTCATTTGAAAATCCACGGAGGAAAGAAGTCATTTCACTGTCACGTGTGCAATAGTACGTTTACGACGAAAGGTAGCCTTAAAGTTCACATCCGACTACATACAGGTTCTAAGCCTTTTGAATGTGATATGTGTGGTATGAAGTTCCGTACGTCTGGTCATCGAAAGGTTCACATGGTAACGCATACGCGTGAAAAAAATTCAGCAGCAAGTAAATCGAACCAGAAAATTGAAGTAACTGCTGATACTGAAAAAGACGAGACCGCTGATAACGAGAGAATCGTTCGAATCGTCCACACAACGACAGAGCCTCATCAAATCATGACCCAACCAACAGACGGACAAAACATGAGCACTATAACGTTGAATTCGGACAACGACCAAATCACTCTGAACGCTCATAATGCTGACGGAGCTGGGCTTTTAGCTCTGGACGAGAATAACCAGCTCGTATCTAATCTTCAGTACCTACTGGAAAACGGACTGGTCACGATTCAAATGGAGGACGTGCCCCAGTCTTCGACGGATGTCGTTCAGAACGGTTTCGTCACGGCGAATGTTGACCAGAACCAAATGACGGAACAACTAAATGCGTATGCGTCAGAGTTGGGCAACGTGATTACAGCAACGATGGATGAGAACGATGCTCAGTTAAATAATAGCGTAGTCTTGAGACAGGCCAAATCTCCTGGCGGTGCGACGAGACGCGAATGCGACATCTGCGGCAAAGCGTTCGCCAAGCCGTGCCAGCTCGAGCGCCACTTGCGCATCCACACAGGCGAACGTCCCTTTAAATGCGACCTTTGCGAAAAGTCCTTCGCCCAGAAGTCCACCCTGCAGATCCATCAAAAGCAGCACACGGGTGATCGTCCACATCCCTGTCCCCACTGCAAGCGTTCGTTCGTCCAGAACGGCAATCTGCTGACGCACCTGAAGCGCGTGCACAAGGTCGATCCAGCAGAGACGAAACGTCAGACAAAAGGACAACAGCAATTTGTCGTTTACAGTCCAAAGCCGCCGCCAACGCCGCTGCAACAGTCCGGCGATGTACTTGGCTTTGACGATATCTCGTTCGGTGAACTGTTGAAGTGA
Protein Sequence
MNSSMMMNFMLSDDGRTLLAVQQGKDGNLELLSVPVAVLPSENGISLPQALKLSNGDTTLNELNLHDVSINIQQPLSPTQVIKLTPSDHHTVSEKRCQSETNSFPLNQSPQFNFENLQSRPEPVSERQKTELESNLVPNEAPLKLHKKSPKKHRRKSGRPKKIIKNEEEEEPACFKCDICGQEFKKQYLMQKHMHDHAQEKPHHCPKCPASFNVPTNFTLHMATHCLSDPKCPECGKKFARIASLKSHMQVHGVDENLYCTECEDTFETKAQLEAHLKLHNEKWTADDYRRCKLCRKQFTQPVLYRQHLRDHYRTQMKCARQTKRGIRHRTVYKCRICLKVFEKPSQLARHIRVHTGEKPYKCHLCYRSFSQKGSVRIHMWQHNGIRPYSCSFCHAQFSQKGNLNSHVLRVHSVQKGGTVYRCTQCPCIFKKLGTLNGHMRRAHEGKPCNDEPPDKDEEEEEEEQEEEEQQPMEQDEIENTSPEARAKGKEAEMDFEDGFVVTDEGQNTAVVTLPDKESKGKFVKIKQRFVNNSRQYECSDCDKVFKKPSDLMRHLRIHTREKPFKCKKCDRSFTLKSTLQTHEKIHRAENKFPCDECSVVLCSEEAYDAHKAGHKDGYECKICDQRFPTFDELRSHTAVHSTNRKDRKKAQPPPEVQNLLPKVVLKEPLVLTETSNGLLHAQPKYRNELAHGKGRPHKCPACSAGFMKFSHLKQHYRKHTGERPFTCDFCDKGFATQSALKAHNRTHDLLRPYQCSICNSNFTTLSSMKRHQVTHSNKRPFMCPYCNKTFKTTVNCRKHMRVHKQEIAQQQLEQEKRPQKESPTSDNFDNSVMSSNMKVTMTEPIFINNPEVTFQHVPTNLVQNLNSQIQSTVTQDSFPSVPLTSQNIHITTQNIPIVNSNIGTTQTLHADENGTVTLANYTGDQMLTSENIREIEETLNQQLYSIGMNLALNNSTKMNEECNNTTLESQNPPILSIIYDNGKTMESPISTSINTNVFASQLDNFDINQFTLQNDNEMGIGISQISPANIASFLSNSVQENPQFTLPLVCTDSEMDTILKQSLGKSEDQSVDVANKNNKSLFEESNLQCHMCNIQGLTADDLKEHLKTHQGKREFECTHCILKFCTSGGLSRHMKIHEVPEKHKCYECNQEFPTTLKLRQHIKEHVKRELALRTGTETIIDDIEIKSDEGTGKRNNKCAYCTKTFRKPSDLTRHVRTHTGERPYQCTFCEKSFAVKCTLDSHLKIHGGKKSFHCHVCNSTFTTKGSLKVHIRLHTGSKPFECDMCGMKFRTSGHRKVHMVTHTREKNSAASKSNQKIEVTADTEKDETADNERIVRIVHTTTEPHQIMTQPTDGQNMSTITLNSDNDQITLNAHNADGAGLLALDENNQLVSNLQYLLENGLVTIQMEDVPQSSTDVVQNGFVTANVDQNQMTEQLNAYASELGNVITATMDENDAQLNNSVVLRQAKSPGGATRRECDICGKAFAKPCQLERHLRIHTGERPFKCDLCEKSFAQKSTLQIHQKQHTGDRPHPCPHCKRSFVQNGNLLTHLKRVHKVDPAETKRQTKGQQQFVVYSPKPPPTPLQQSGDVLGFDDISFGELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01468236;
90% Identity
iTF_01465603;
80% Identity
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