Basic Information

Gene Symbol
BAS1
Assembly
GCA_900474315.1
Location
UXGD01002679.1:6168-9784[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.14 2e+02 2.9 0.0 15 43 259 292 253 295 0.77
2 6 4.8e-12 6.8e-09 36.4 0.3 1 44 301 346 301 348 0.96
3 6 8e-07 0.0011 19.7 0.0 2 42 356 400 355 403 0.97
4 6 1.1e-13 1.5e-10 41.7 0.0 1 44 410 454 410 455 0.95
5 6 1.6e-09 2.3e-06 28.3 0.1 1 42 463 504 463 508 0.93
6 6 2.7 3.9e+03 -1.2 0.0 3 16 543 556 542 558 0.87

Sequence Information

Coding Sequence
atgagtgAGGAAGAAGATAATCAAGATCTTTTAGATGAAATTCAAGCTTTAGAGGATGCCCTGGATCAAAAAggaattttaaatgataatgaatataattcatCCAAGTGTAACATTCGTATATTACcagaatttaaaacaaaatgtgagAATGATGTCAGCAGTTTGATGGAAATCGATGATAGCAATGATGATGACGATAGcaatgatgatgacgacgacgatgatgatgatgatgatgatgatgatgaggctGATGCTGATGCTGATGCTGATGATGACGGCAATGATGATAGTATTGCCAATGTTGATCAACAAAATGATTATGAGGACTATAAATGTCATAACTTACAAGATCTAttcgaattaaataaaaagttaattgaatCAATTGTGTCAGCTCGTGAAAAAGTAAATGTACTTCTGGAAGAATGTACAAGCAAATTACGTTCAATTGATGAACAGATTTCTAAGCATACAAACTCTTGGCAGGCTAAGATAGTAAGCTTTAATGCTGGCATGccttattttaaagataaaaattatttcacagcCAAAAGAAATCAAGATACTGAAACTAAAATACGAAATGGTGAGTTGCGGTTGGCTGAACTACAGAGAATACATCGTTGGAATCAAATTGATaagaataatttgttaaaagctataagatatgaagtgactttaactttattaacaaGAAGTCAACCTGatgaagtatatatagataataatatcaCTAAAACAAGCCAATTACCTAATGATGTTAGGGAAGCTATTGGAACTTTAGGAACTATGAAATTTGATTGGTTAAAAATTGCTAATAATATCTCTGAGAATAAACACACAGCAGAAGAGTGTGAAGTTATGTGGAATGTTTTTTTACATCCtgatattaataaacaaaaatggaCTCCTAAAGAAGACAGGAATTTAAATCGTATAGTAGAAGAATACGAATTTGAAGACTGGGATGCTATTGCCAAAGCCTTAAATACAAAACGTAGTGGCTATCAATGTTTTGTTaggtataatacaaataattggaaaaatctTATGAAGGGTCAATCGTGGACACCTCTAGATGATGAAACACTTCTTTATCTTGTATCAAAACTTAAAATAGGAGATTATATACCATGGGGATATATAGCAAGTTGTATGAATAATTGGACAAAACAGCAgGTATACTTCCGTTGGACATTCAGTTTAGCAcctcatttaaaaaaaggaagattttcagaagaagaagataagaaGTTAGTAGATGCAGTAATGAAATATGGTCtgaattttagtaaaatatctGCTTTAGTACTGCCTAATAGaacaaatattcaattaaaGGAACACTTTCAAACTTTATCAAGTAGGCAAAGTAGGCCGAGACAAGTTTGGACAATAGAAACAGATACAAAGCTTCTGGAACTTCAGAAGCAGTATGGACAGCAGTGGGCTAAAATTTCTGAACGCATGCCAGGTATTTCAAGAACTCAAGCCCGGCAGCGTTTCTCATGCCTAATGCGTTATCAATCAAGAGGTGTTCCTTTTACAAGTATTAACAGAGATGAAAATGTCGATGAATATGTACTAAGCCATACAACAGTAACATATACTACTAATACTCCTTGGTCTCgtgaaaacaaagaaatatttgtaaaacatttaaaaattgatgaccagcttataaatcattttaaaagagaTGAACCAAGAACAAAGAAAGCTGCACAAAGAAAGAGGAAGACATATAATCCTGATGATTTGAAAGAAGATACCAAAAAACTTTatcatgttttattaaaattaaatgctaATTTAAATATACCAAATTTAGACTTTGATGATTGTAACTTAAATGAAACTAATCAGCAGTTACTAGTATCTTTGCAAAGTTACATAGAGGAGCAAAAAATACATAGTACAGAAGATGTTGAATTAATTAGAGAAAAAATGTTTGGTCCACAAGAAATAGTGCcagaagaaaaaagatttataccTCCTTTaccatttaatttttgtattccaagatacaaattaaaaaagagtACTGGTATtgattatgttattaaaaataacgaactTCATCAAATGGAATTAAATATGGTATTAGAACCAAATAAATATGTGACAGAATATCTTGGGGATGACATTgaatatgaatttgaaaaactaaaaaaacttaCAATCGCTGAAACAACATTTAGAAGACCAGAAAAAAGCTACTCTATAAAATGTAAACCATTTGCTGCTTTCTTTGGTAATTCAGAAGAATGTGATGACGAAATAAATgTTATTATGGGGTCTTCTACTCGTAGTCAACAAATGGACTATGACTGGGAGTTGAATAGGATGGTTTCAGATAACTCATCCAAAGAAAAACACGTAGTAGAAAGTTGCCCTATATCAATAATAGAGCCAAGTAGAACAACACTGCAAGCTTATCAAGAGTTATTATTGATGTCTGGGAATTGTTCTACgaattcaaaaacaaatttaaattgtcGATTAACTTCAAGAGGTCGTCAAGCTTTGGATGTGTTTAAAAGACGTTATCAGCAATTGTTTCATGTACCTACTGGTTTGTCAAGAATCATACCACCGGATGTTATTGATGAAAGTGCATTTTTACCAGCGCTTGAAAAGCATAAAAAGAAGAACGTTAAAAGAAAACGTCCAAAAAGCATCATAAAAGTTGTTAATAAGGAATACGTAAAAGCACCGAAGTAA
Protein Sequence
MSEEEDNQDLLDEIQALEDALDQKGILNDNEYNSSKCNIRILPEFKTKCENDVSSLMEIDDSNDDDDSNDDDDDDDDDDDDDDEADADADADDDGNDDSIANVDQQNDYEDYKCHNLQDLFELNKKLIESIVSAREKVNVLLEECTSKLRSIDEQISKHTNSWQAKIVSFNAGMPYFKDKNYFTAKRNQDTETKIRNGELRLAELQRIHRWNQIDKNNLLKAIRYEVTLTLLTRSQPDEVYIDNNITKTSQLPNDVREAIGTLGTMKFDWLKIANNISENKHTAEECEVMWNVFLHPDINKQKWTPKEDRNLNRIVEEYEFEDWDAIAKALNTKRSGYQCFVRYNTNNWKNLMKGQSWTPLDDETLLYLVSKLKIGDYIPWGYIASCMNNWTKQQVYFRWTFSLAPHLKKGRFSEEEDKKLVDAVMKYGLNFSKISALVLPNRTNIQLKEHFQTLSSRQSRPRQVWTIETDTKLLELQKQYGQQWAKISERMPGISRTQARQRFSCLMRYQSRGVPFTSINRDENVDEYVLSHTTVTYTTNTPWSRENKEIFVKHLKIDDQLINHFKRDEPRTKKAAQRKRKTYNPDDLKEDTKKLYHVLLKLNANLNIPNLDFDDCNLNETNQQLLVSLQSYIEEQKIHSTEDVELIREKMFGPQEIVPEEKRFIPPLPFNFCIPRYKLKKSTGIDYVIKNNELHQMELNMVLEPNKYVTEYLGDDIEYEFEKLKKLTIAETTFRRPEKSYSIKCKPFAAFFGNSEECDDEINVIMGSSTRSQQMDYDWELNRMVSDNSSKEKHVVESCPISIIEPSRTTLQAYQELLLMSGNCSTNSKTNLNCRLTSRGRQALDVFKRRYQQLFHVPTGLSRIIPPDVIDESAFLPALEKHKKKNVKRKRPKSIIKVVNKEYVKAPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01467024;
90% Identity
iTF_01467024;
80% Identity
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