Taur002973.1
Basic Information
- Insect
- Torymus auratus
- Gene Symbol
- -
- Assembly
- GCA_900474315.1
- Location
- UXGD01001704.1:14013-15582[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-08 3.3e-05 24.2 0.0 2 43 15 55 14 58 0.85 2 2 6.9 4e+03 -1.7 0.0 2 14 334 346 333 351 0.87
Sequence Information
- Coding Sequence
- ATGAAGATCCGAATGGTACAGAGAAGGCGTGCCAAGTACAGTCAGGAAACTTTAAAAAAGGCTTTGGCGGAAATAAAAGAAGGTGTGGGTATCAATACGGTTAGCAAAGAGTATGAAATACCAAGATCAACTCTTCAAGCAAAAAAGACCAATAGGTATCCAACAAGTAAACCTGGTCCAGATCCTGTATTAACCAAAGAGGAAGaagataatattgtaaaatggaTTGATTACATGTGCGGCATTCGTCGTCCAATTACGAGAGATCACCTGATTGACAGTGTAGCTTTGTATgtgaagaaaatggcaaaaccAAATCTTTTCGTCGATGGACGACCAGGTAGACACTGGCTCGAAGGCTTTTTCCGAAGGAACGATGGCGTAAAACTAAAGATACGTAATCATAATGCAACAATTTCGAAACAGtttataaatttcgaaaatttgagCAATTGGTTTGAGACTTTAAACAGTAGTATACGTCACGAGAatcttgaaaatattgaatCTGCAAGAGTGTTCAATATTGGCGAGATGGTAGTTCAAATGAATCTCACAAATGAATCGAGTAAAGAGTATGTTACTGTACTCTTATGTGGTAACGCTGCTGGACAGTTGGCTCCGACTATGATCATCTTCGATTCTGAGATCCACGGGAATTTGACTATAGACAGTCTACCTGGAAAGTTTATCTGTACATCTAAGAAAGCATTGATGACTTCAGAACTATTCTATGAATACATAGCAAAACATTTCTATCCATGGCTAGTTGAAAATGAGATCCAACCGaccataattttatttgtagatGAGCACGTTTCATACTTTACGCAAGTGTTAAGTGAATTTTGTTGTGATTACAGTATTGCCATGGTCGCATTGCCTGTAAACACGACGGATTTTATGCATCCTATGGAGATCGAGCTGTTTCCTCGTTTAAGGGAATTTGCAAAGGTTAATTTGAATATTCCTCCAAGTAAATACAACGCGCCAAAAAGTAGAGAATATTTTGAACTTGCCTTACAAGAAGTTTTGAATCGTTtaaacttcaataaaatattgcCAACGAGTTTTGCGGAATGTGGATTGTATCCTTTAGCCAACAGAGACAtgcagtataaaaaaatttttgctaaaCATCAGTCTAGAAGAGGACGGAGCGGACGACGTAATTCTAATGATCAAGAACCAGAAGATCCAAATTCGTTATTACAATCTATTGAACAATTGATTGATCCACtaaaattaaaagcttttaGAGCAGCAAGAAATACTTATAAATGGCAAGGAAATGTTAAAGATACGAGTCTTTTCTATCTTTGGAAGAAAGTATTAACTATCTCTcgccaaaaaaatgaaaataaatttcgaaataataatatagaaaatCAATCAATCAATACCTCATTAGATGATGAATTATTCGATTCGCGAGTTATTGTTGTTGATCCGAACAAATTATTTCTAGACTCTGATTCTGAAATCAATTGA
- Protein Sequence
- MKIRMVQRRRAKYSQETLKKALAEIKEGVGINTVSKEYEIPRSTLQAKKTNRYPTSKPGPDPVLTKEEEDNIVKWIDYMCGIRRPITRDHLIDSVALYVKKMAKPNLFVDGRPGRHWLEGFFRRNDGVKLKIRNHNATISKQFINFENLSNWFETLNSSIRHENLENIESARVFNIGEMVVQMNLTNESSKEYVTVLLCGNAAGQLAPTMIIFDSEIHGNLTIDSLPGKFICTSKKALMTSELFYEYIAKHFYPWLVENEIQPTIILFVDEHVSYFTQVLSEFCCDYSIAMVALPVNTTDFMHPMEIELFPRLREFAKVNLNIPPSKYNAPKSREYFELALQEVLNRLNFNKILPTSFAECGLYPLANRDMQYKKIFAKHQSRRGRSGRRNSNDQEPEDPNSLLQSIEQLIDPLKLKAFRAARNTYKWQGNVKDTSLFYLWKKVLTISRQKNENKFRNNNIENQSINTSLDDELFDSRVIVVDPNKLFLDSDSEIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -