Taur024945.1
Basic Information
- Insect
- Torymus auratus
- Gene Symbol
- bab2
- Assembly
- GCA_900474315.1
- Location
- UXGD01006647.1:6453-8243[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-11 3.5e-08 33.7 0.0 1 38 335 373 335 377 0.93
Sequence Information
- Coding Sequence
- ATGATTCCAGCGCAACAATACTGTCTGCGTTGGAACAACCACACCTTGAATTTTATCAACATGTTCGAGCAACTCTTGAGAACCGAAGCTTTCACTGATGTCACCTTGTCACTCGGAGGTGGTTTCAACATCAAGTGCCATAAGGTGGTATTAGCATCTTGCTCCACATACTTCCAGGATATCTTCCTCAGGAACCCCGGTGATAATCCAGTCTTGATCCTTGGTGACGTTCAGGTCCATGAGATCGAGGCAATCCTGGACTACATGTATAAGGGTGAGGTGAACGTAGCATGTGAGCATCTACCCAGCTTGCTCAGGGTAGCAACCTTCCTCAAGGTGAAGGGTTTGGTAGAGGAGAACAACAGAGACAGCTTGTTGACGATGATAAACGCAACcacagcagcggcagccgcaGCGGCAGCCGCAGCGGCAGCCGCAGCTACCGAGGCCGATTCTTCAGAGACGGTTACCAGCGCTGCCCATAGTTCTGGCTACATATCGCCACCAGTCCTGAGCATCCCGCCGACCTCGACGTACATACCGTACGGGAAGTCTCCCGTCGACGCGGCGAAACATCTACCTGTGTGGGCCGCCGCTTTGACGAGTATGCCTGTGCCTGGTCATTCAATTTCCGGGCAGCCGACACAGGTCCGGTATAGCTCATCCTATGACAACACCGCCGAATCGTCACCTCTGAGTAGAAAGAAGCAGTCCATCATGATGGCGTGCCGTGACACGCCGATTCTTAGGAACGTCCTGGGTGGCGAAGGAACGACCGCCGGACAAGAAACAATGCAGGGTTCCAATAGCAATGGCTCGATGTACGATTCGGATAGGAGGAACAGCGTAGATATGTCAGAGACAATGGTAGAAGAGGATGACGCGAGTCATTGTAATCTAAGCCGCCCGTTGCCTCCAAATTATCATCCACCCTCAAATGACAGGTCCAAGGGTAGGTTCGGAAAACGGACCAAACCAGAATGGAAGAGATACAAGCAGTACACCCGGGAACACATCTGGGAGGCAATGGAGGCCGTGAAAAATAAGGAAATGAGCGCCTTGCAGGCCGCTCGAAAATTCGGCGTACCATCACGCACGCTTTACGACAAGCTGAAGAAGGCCGGCATATTACCATCACGCGGCGCCACCCAGCGTCGCGAATCCTCGTCGTCCTCGCAATGCGGCAGCGCCAGATTCCCGTACCAAGGCAAAACCAACGGCCACGTCTACGGGAATGGTATCAACCACGTTACCGCCCAGCTCTCTGATGAGGACCCGGACCAGTCAACCACCACCAACGGACCAGCGATACCCCGTGGCAACAGCGAAAGCACGTCCTATATGTACAACACACCGGTAAACGGCAGTAGTCATGACCCGGAGGACGGCGCTATGGATATGACGACGCGCAGCCCCAGCTCTGAGGATGAGCTCCAGGTCGAAGATCTGTCCGTGAGAAGTGGCGACAGGTCCAATCAATATCATCGTCATCAGCAACAGGTAACCGAGAATACCGTGATGGACGACACGAATTTGCCCGCGACACCGCCACCGCTGCAGGTCGACGTGAAGGAAGAGGATTCGGATAATCCGGATGAAGCGGGCGGTCACGCCTGA
- Protein Sequence
- MIPAQQYCLRWNNHTLNFINMFEQLLRTEAFTDVTLSLGGGFNIKCHKVVLASCSTYFQDIFLRNPGDNPVLILGDVQVHEIEAILDYMYKGEVNVACEHLPSLLRVATFLKVKGLVEENNRDSLLTMINATTAAAAAAAAAAAAAATEADSSETVTSAAHSSGYISPPVLSIPPTSTYIPYGKSPVDAAKHLPVWAAALTSMPVPGHSISGQPTQVRYSSSYDNTAESSPLSRKKQSIMMACRDTPILRNVLGGEGTTAGQETMQGSNSNGSMYDSDRRNSVDMSETMVEEDDASHCNLSRPLPPNYHPPSNDRSKGRFGKRTKPEWKRYKQYTREHIWEAMEAVKNKEMSALQAARKFGVPSRTLYDKLKKAGILPSRGATQRRESSSSSQCGSARFPYQGKTNGHVYGNGINHVTAQLSDEDPDQSTTTNGPAIPRGNSESTSYMYNTPVNGSSHDPEDGAMDMTTRSPSSEDELQVEDLSVRSGDRSNQYHRHQQQVTENTVMDDTNLPATPPPLQVDVKEEDSDNPDEAGGHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01466408; iTF_01467254; iTF_01467013;
- 90% Identity
- iTF_01466408;
- 80% Identity
- iTF_01466408;