Basic Information

Gene Symbol
ct
Assembly
GCA_900474315.1
Location
UXGD01000038.1:6889-21787[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.7e-28 8.3e-24 84.1 0.0 2 72 397 468 396 473 0.95
2 3 1.4e-32 2e-28 98.9 0.0 3 77 831 906 829 908 0.96
3 3 1.3e-30 1.9e-26 92.5 0.0 3 76 1072 1146 1070 1149 0.96

Sequence Information

Coding Sequence
ATGAGCCTGCAGCGTCTGCAGGAGACGAGCGCGCAGGCGACGACGCGGCTCGAGGAGGAGCTGGAGGCGCATAGGCAGCACATAAACCGGCTCGAGGCGAAACTCGAGCGGCAGAAGGACTACGACGAGCTGAAGCGCGAGATCAGCGTGCTGCGCTCGGTCGATCTGTCCCAGATACCGACCGGCGAGCCCGGCAAGAGCCTCGAGCAGGTGCTCATGGAGCGCTCCAAGGCGCTTCAGCAGGCCGAGAACCTCAAACCGCCCAGCACGCCCGATGCACTAGGTGGACTATCGTCACCCCTGCAGCGGGCCGCGACCGCGTCGCCGCACGGTTGCAGCGCGGTGATCGCACCTCCATCGTCCTCCCTCGTGTCCTCCCAGTCGTCGGTCCCCAGCCGCTCCACCCCCACGCCCTCCTCCTCGTCCGGCGCCGTCGTGGGCGCCGGCGGCGCCTCCTCGACGGGCTCTACGTCGCTCCTCTTCCCTCCTCCCCTCCAGAATGTCGAGACCTTCGGCTCGTTTCTCGGCGAGGAAATCGTCGCCAACTGGAGACGATCCCTGGAAAGGTCAATCATGAGTCAGCAGCAGcaccaacagcagcaacagccgaCGCCCCAAGCCTCCGCAGTCGGTCTCCACCCGGGCGCAGCCAACGCCATCGCAGCGCCAGTACCGCCCGCTAGTCTAAACCACCTCCCGTCGCCAACAGATCCGATCTCCACGTCCAGCACGCCGGCCAAGTCGAGCACGCCCGCGGCCCTCGAGGCCGACAAGCCCGGAACGCCGGTCTCCGGCCACGAGACCCCGGCCCCGGCCACGCCCTCCTCGACGACGACGCTCACATCGCCGCCGATGCTCCAGCCACTCATGGTCGACGGCCTCTCGCTGAACAACGGACCGGTCAGCAACCCGGCGCCGCCGCCCAAGAGCCCCGCCGAGGAGTCGCCCTgtcacaacaacaacaacaacagccatCACCTGGCCAACAACAACATCGGCGGCCTCAGCGTACTGGAGAGCCTCAAGAGTCCCTTCCGCTTCGACGAGCGCTCGCACCCGTTCAGATTCGGCGACGAGTTCGGAGCGGCCGGAATGGTCGGAAGACTCGGCGAATCCTTGATCCCGAAGGGCGATCCCATGGAGGCAAGGCTCCAGGACATGCTCCGCTACAATATGGACAAATACGCTTCGCAGAACCTCGACACGTTACACATAGCGCGACGGGTACGCGAACTCCTCTCGATACACAACATCGGCCAGCGGCTCTTCGCCAAATACGTGCTGGGTCTGAGCCAGGGCACCGTGAGCGAGCTCTTGAGCAAGCCCAAGCCCTGGGACAAGCTGACGGAGAAGGGGCGCGACAGCTATCGTAAGATGCACGGCTGGGCATGCGACGACAACGCCGTGCTGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGCATGCCGGCTTTCGCGCGTGGCCCACAGGAGGGTGGCGGCCCCGGTGGTaacggcaacagcagcagcagcaacaacaacaacagcaacaacaacaacggcggTAGCGGAGCTGCCAGCGTCGCCGGAATCCCGAGCACCCCGCAAGAAATGAGCGAGGAGCGCATCGCGCACATGCTCTCCGAGTCCGGACACATGCAGGCGGCGCTGAGCCGACAGAGCGAGACCGAGGCGTCGAACGACGCCGACAGCAAGAGTCCGAGTCGGCTCAACTGCCCCAGCCCGTTCGGCAAGGACCGCGCGAGCAGCGTCGACAGCCAGAACCGCAGACTGAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGCGAGGATCTACCAGGAGGAACTGGCCAAGATCATGGGCCGCAGGGTCGAGGACATGCGCGGACCGCGAGACTTCCCCACTAGCGCGATGTTTCCCCACTTTTTCAGTGGCCAGAACCTGCAGGGCATGGGCACGACCGAGGAGATCCGCATGGCCCTGGACGCCTACCACCGCGTGGCGCAGGGTCTGCCCTATCCACCGCAGATCTCGGGCCTGATAGCACTCCAGCAGCACGCCATTCAGCAGCACCACTTGGCGACAAATGGTGGCGCGGccCAAGACCTCAGTCTGGGCAACATCCTCAGGAACAAGATGATCAACGGTGTGTccgaggaggagaaggagaagatgGAGGAGGCCATGAGGCACGCGGGCAGCGCCTTCTCCTTGGTCAAGCCGAAGCAGGAACCCACGGGTGCGCAATCGACGCCTGGTGGCTCGAGCGCCAGCTCGCCTCTAGGTAACTCGATCCTGCCGCCGGCGATGACGCCCAGCGAGGAGTTCACGGGCGCCGCCGCGGCCAGTCCGCTCCAGCGGATGGCCTCCATCACGAACAGTCTTATCAGCCAACCGTCCACGCCGACCCACCATTCATCCAGTCAGCGACCGCTTAAGGCTGTGCTGCCGCCAATCACCCAGCAGCAGTTCGACATCTACAACAATCTCAACACGGAAGATATCGTCAAGAGGGTGAAGGAACAGCTCTCCCAGTACTCGATCTCTCAGCGCCTGTTCGGCGAATCTGTCCTGGGCCTGTCGCAGGGCTCGGTTTCGGATCTTCTGGCGCGACCGAAACCCTGGCATATGCTCACGCAAAAGGGTCGCGAGCCCTTCATACGCATGAAGATGTTCCTCGAGGACGACAATGCCGTCCACAAGCTCGTGGCGAGCCAGTACAAGATCGCCCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACACCGATGAAGCCCATGCCGCCGACGAAGCTCGTGCAGGAGCAGCTGCAGAACGCTGCGAAGGCCCAGGCTGCAGCGCAAGCCGCCGCCCAGGCAGCCGCGGCAGCCCAGCACCAGCAGGAGAGCCAGATGCAGCTCGGGCCACCTCAGCCGAGTCCGCAGCACCCAGCTCACCCTCAAGTGCCGCCCATGATGCTGACGCCGCCCGGAGGCATCCTGCCGCACGCGCAGATCAGCATGCAGGAGCtgcagaagaagcagcagcagcaggtgcagcaggcgcagcagcagcaacagcagtccCAGCAGCAGATCGCGATTCACTCGCCGCACCAGATGGCGCCGACGAACATGCGCGCCCTGCAGCCCCACATCTCGCCGAGCGTCTACGAGCTGGCTGCCCTGACAACAGACCTGGACACGCAGACCACCACGACCAAGATCAAGGAGGCTCTGCTAGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCCGTCCTCGGCCTGTCGCAGGGCTCGGTCAGCGAGCTCCTGAGCAAGCCCAAGCCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGATGTGGCTGGCCGACCCGAACAACGTCGACCGGCTGCAGGCGCTGAAGAACGAGCGCCGCGAGGCCAACAAGAAGCGGCGCATCAGCCTGCCCGGCCACGACAACAGCTCGGACACCTCGAGCAACGACACGGCCGAGTTCTACCACGCGGCCTCGCCCGGTCCCGGACCCACCTCCGCCAAGAAGCAGCGCGTCCTCTTCAGCGAAGAGCAGAAGGAGGCGCTGCGACTGGCCTTCGCCCTCGACCCCTACCCCAACGTCGCGACGATCGAGTTCCTGGCGAACGAGCTCGGCCTCTCGTCGCGCACCATCACCAACTGGTTCCACAACCACCGCATGAGACTgaagcagcagccgccgcacGGCCAGCCCGAGCCGCCCTCGAGTCGCGAGCCCAACCAGCCGTTCGACCCCGTGCAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATACAGAAGGAGAGACTCGGCCTCGGCACCGTGGCGCTCACCTATCCGCCCTACTTCAACCCGAACCTCGCGGCCCTCGTCGGCAGCGCCCTCAAGGAGCAGTGCTCGGGCCTCGACCTGTCCATGGGCTCGCTGAAGCGCGAGCCCAACCAGGAGTTCGAGGACGAGGACGCCGACGACGCGATGAGCAACATCGGCAGCGAGGACTCGGAGGGCTCCGCGGCCAGCATAAAGCGCGAGCCCACGGAGGCGCCGGCGCCGGCCAGCAGCACCTCCTCGAGGTCGAACAGGCGGAAGCCCGCCGCCCCCCAGTGGGTCAATCCCGAGTGGCAGGAGCCCGCGAGGGCGGGCGACGAGGTCATCATTAACGGAGTCTGCGTCATGCAGACCGACGACTACGGCGTGAAGCGGGAGGCCGAGGAGACCGTCCGGGTGGAGCCGACGCCCGTGCAGGACCGATACGAGGAGGACGCCCAGAGCGACGTCTCCTCGGTCTCCGCGACCAATCCCCCGGACCGCGAGAGCCCCTCGCCCAGTCCCAAGTCCGCGCAGAATAGCCCTGCGACGTCGCCCAGGCCGCCCTCGGCCTCGCAGGCGCCACAGCCCGTCGAGGACAGCCCCAAGGACGTCGTCAAGCAGGAGCCCGAGGAGGCCTGGGACTATTAA
Protein Sequence
MSLQRLQETSAQATTRLEEELEAHRQHINRLEAKLERQKDYDELKREISVLRSVDLSQIPTGEPGKSLEQVLMERSKALQQAENLKPPSTPDALGGLSSPLQRAATASPHGCSAVIAPPSSSLVSSQSSVPSRSTPTPSSSSGAVVGAGGASSTGSTSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQHQQQQQPTPQASAVGLHPGAANAIAAPVPPASLNHLPSPTDPISTSSTPAKSSTPAALEADKPGTPVSGHETPAPATPSSTTTLTSPPMLQPLMVDGLSLNNGPVSNPAPPPKSPAEESPCHNNNNNSHHLANNNIGGLSVLESLKSPFRFDERSHPFRFGDEFGAAGMVGRLGESLIPKGDPMEARLQDMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKEYVSGKEQGMPAFARGPQEGGGPGGNGNSSSSNNNNSNNNNGGSGAASVAGIPSTPQEMSEERIAHMLSESGHMQAALSRQSETEASNDADSKSPSRLNCPSPFGKDRASSVDSQNRRLKKYENDDIPQEKVARIYQEELAKIMGRRVEDMRGPRDFPTSAMFPHFFSGQNLQGMGTTEEIRMALDAYHRVAQGLPYPPQISGLIALQQHAIQQHHLATNGGAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPTGAQSTPGGSSASSPLGNSILPPAMTPSEEFTGAAAASPLQRMASITNSLISQPSTPTHHSSSQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAAQHQQESQMQLGPPQPSPQHPAHPQVPPMMLTPPGGILPHAQISMQELQKKQQQQVQQAQQQQQQSQQQIAIHSPHQMAPTNMRALQPHISPSVYELAALTTDLDTQTTTTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLADPNNVDRLQALKNERREANKKRRISLPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLSSRTITNWFHNHRMRLKQQPPHGQPEPPSSREPNQPFDPVQFRLLLNQRLLDIQKERLGLGTVALTYPPYFNPNLAALVGSALKEQCSGLDLSMGSLKREPNQEFEDEDADDAMSNIGSEDSEGSAASIKREPTEAPAPASSTSSRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSVSATNPPDRESPSPSPKSAQNSPATSPRPPSASQAPQPVEDSPKDVVKQEPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00845082;
90% Identity
iTF_01469451;
80% Identity
iTF_01466059;