Taio027048.1
Basic Information
- Insect
- Torymus aiolomorphi
- Gene Symbol
- nfxl1
- Assembly
- GCA_036365515.1
- Location
- CM070873.1:237011728-237014456[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 6.9e+04 -3.2 1.1 15 19 123 127 122 127 0.81 2 19 0.084 5.5e+03 0.3 0.5 4 10 158 164 157 164 0.95 3 19 1.2e-08 0.00077 22.2 16.7 1 19 172 189 172 189 0.99 4 19 6.1e-07 0.04 16.7 13.8 4 19 228 243 226 243 0.94 5 19 0.61 4e+04 -2.5 0.2 5 10 267 272 267 274 0.86 6 19 0.00017 11 8.9 12.1 1 19 278 297 272 297 0.90 7 19 0.0002 13 8.7 10.7 1 18 333 350 333 351 0.97 8 19 0.0069 4.5e+02 3.8 7.6 1 12 385 396 385 396 0.94 9 19 0.41 2.7e+04 -1.9 1.2 6 10 406 410 405 410 0.90 10 19 2.6e-07 0.017 17.9 15.8 1 19 416 434 416 434 0.93 11 19 0.00011 7.2 9.5 7.6 9 19 482 492 480 492 0.90 12 19 0.00015 9.9 9.0 6.6 1 12 502 512 502 512 0.95 13 19 0.37 2.4e+04 -1.8 2.5 15 18 544 547 543 548 0.87 14 19 0.00023 15 8.5 6.7 1 12 584 595 578 595 0.91 15 19 0.78 5.1e+04 -2.8 1.7 6 10 611 615 610 615 0.88 16 19 0.013 8.6e+02 2.9 16.1 4 19 625 640 623 640 0.91 17 19 2 1.3e+05 -6.6 3.4 9 13 646 650 646 650 0.71 18 19 1.4e-05 0.89 12.4 9.9 1 18 685 704 685 705 0.88 19 19 0.93 6.1e+04 -3.0 0.9 6 10 735 739 734 739 0.89
Sequence Information
- Coding Sequence
- ATGAGAAAATTCAGAAGAGCTCAAGCACAAAATCAAGCTTCAATTGAAAAACACTTAGTGGCAAACAATGTTGAGTCCTCTAGCAGTGATGATGAAAATGAGGAAGTATTAGAAACAGCAGTTGAGAAAGTATTGTCAACTTATCAACGTGAAGGTGGAGATGTTAATAAGACTTCATCTTATTTAACTGAAACTTTGCAATCTGGAGGAGCTGTTTGCTTAATTTGTATTTCTTCAGTAAAGAAAACTGATGCAATTTGGAGCTGTGTTGAATGTTACACGTTTTTACATTTACCATGTATTCAGCACTGGGTGCGAGATAGTTTAAGTTATAAACATGAAAAGGGAATTAAACCTTTATGGGCTTGTCCAAAGTGCAGGTCAGAATATGGGGAAGATCAGATACCACGAAAGTACGTATGCTTTTGTGGAAAAACTGAAGACCCTCCTTATCAACCATGGAGTATTCCTCACTCTTGTGAGGATATGTGTGGAAAGTTTTTACAACCAAAATGTGGGCACAAATGTATGCTTTTATGCCATCCTGGTCCTTGCCCTCCTTGTCCAAAAATGGTATCAATTGCATGTTTTTGTGGGAAACAAGCACCTTGTCCTCGTAGATGCAATGCGAAAGAGTGGAGCTGTGGTGAGGAATGCAATAAAAAACATAAGACTTGCGATCATAAATGTATGGAAAAGTGTCATTCCGGTACTTGTCCACCTTGCTCAGAAATGATTCTAACTGCATGTAATTGCAAGAATAAATGTGAATCAAGAAAATGTAATGAAGCATTTTGGCGATGTGATAAAACTTGTGGGAGACGCTTTTCATGTAATGTACATGTTTGTGAAGACAAGTGTCATAAGCCAGGAGATTGTAGTACATGTCCACTAGAGCGTAACAGAACTTGTCCATGtggtaagaaaaaatatgctaTATCTTGTAAGCAACAGCAAGCTCCAACTTGTGGAGATACTTGTGGGAAATTATTAGAATGTGGAGCTCATAATTGTAATATGAGATGTCATACAGAACGTTGtggacaatgtttagaagttgTAACAAAAACATGTCGCTGTGGAAGTTTTAGTAAAGAACTTGCTTGCATTAAAGAATTCcattgtaataaaaaatgtacacaAATGAGACTTTGCGGCAGACACTTGTGCAACAAAAAATGTTGTGATTGTTTagtgaaaaatacttttaattcatgTGAAAAAGTTTGTGATAATACATTAAATTGTCGCAAGCATAAGTGTCCTGCACCTTGTCATAGTGGACCTTGTTATCCTTGTCCACGCACCATTGTTATTCAATGTCGTTGtggtaaaagtaaaattactGTTCCTTGTGGAATAGTTAAGAAAATTAAGCCACCACATTGTAACAAAATGTGTAAAATTCCACCAATTTGCCATCATCCCAAAAGAGAATCACACAAGTGTCATCAAGGTGCTTGTCCACCATGCCGTAAAGTTTGTGGATTGGCTCACAAAAGATGTGGTCATACTTGTCCAGCATTATGTCATACGAAAGTGTGGACTAAATTTAAACCAAATGGAGTTGCAAAACCAATTGGGCCTTGGGAAAATCAAAAAGAAAGGTGGGAGTACAAATCTTTTCTATGTCCCCCTTGTGAAGTTTCTGTAATGGTTACTTGTCTTGGAGAACATGAAACACGTCCATGGCCTTGTTATAAAGCTATTTCTAGTTCTTGTCTTAGAGAATGTGGTCAATTATTAACATGCACAAATCATTATTGTGAAAAGCTTTGTCATAAATTACAATCATCAgatgatgataatgatgaaAATAAATGCATGGAATGTGAAAAGCCTTGCGCTTTTCCAAGACCAAAAGGATGCACACATATTTGTCCAAAACCTTGTCATCCTGTTCCATGTAGTCCATGTAAACAATTAGTCAAAATTCCCTGTCACTGTGGAATAAATAGTCTTTACATTCGATGTGCTCAGCTTACTTCTGCTACTGTTGAGCAGaaaaatgaacttttacaatgtggaaatcaatgtccTCGAAACTACCCTTGTGGTCATCGTTGTATAGATAACTGTCATCCTGGACTTTGTAAAAAAGCTGAATCTTGTCGTAAAAAGGTAAAAGTTTTATGTAAATGCAAAAggataaaaaaagatttttcatGTATGTCCATACGAGCTGGAGAAGCTATTGTAGAATGTGATGAAGTATGTCGAAAAAAGAAGGAAGAATTGGATCGAATTAAAGAGcttgaacaggagaaaaagcgAAAAGAAGAAGAGCTGAAGAAtcagaaagaaattgaaatgtTTGAAAAGAAATTCAAACCAAAAAGAAGAGGAAAGGATCGTCATAATAATAAAGAAGAGTCAAATGATAATGGTAATTCCTATAAATGGATGTGGATAATTGCTGTATTGATCATTGGAGTTTCTGCTGCAATAGTACTGACATTTCAGACAAATCCAGACTCACTTTATTATGGGTAA
- Protein Sequence
- MRKFRRAQAQNQASIEKHLVANNVESSSSDDENEEVLETAVEKVLSTYQREGGDVNKTSSYLTETLQSGGAVCLICISSVKKTDAIWSCVECYTFLHLPCIQHWVRDSLSYKHEKGIKPLWACPKCRSEYGEDQIPRKYVCFCGKTEDPPYQPWSIPHSCEDMCGKFLQPKCGHKCMLLCHPGPCPPCPKMVSIACFCGKQAPCPRRCNAKEWSCGEECNKKHKTCDHKCMEKCHSGTCPPCSEMILTACNCKNKCESRKCNEAFWRCDKTCGRRFSCNVHVCEDKCHKPGDCSTCPLERNRTCPCGKKKYAISCKQQQAPTCGDTCGKLLECGAHNCNMRCHTERCGQCLEVVTKTCRCGSFSKELACIKEFHCNKKCTQMRLCGRHLCNKKCCDCLVKNTFNSCEKVCDNTLNCRKHKCPAPCHSGPCYPCPRTIVIQCRCGKSKITVPCGIVKKIKPPHCNKMCKIPPICHHPKRESHKCHQGACPPCRKVCGLAHKRCGHTCPALCHTKVWTKFKPNGVAKPIGPWENQKERWEYKSFLCPPCEVSVMVTCLGEHETRPWPCYKAISSSCLRECGQLLTCTNHYCEKLCHKLQSSDDDNDENKCMECEKPCAFPRPKGCTHICPKPCHPVPCSPCKQLVKIPCHCGINSLYIRCAQLTSATVEQKNELLQCGNQCPRNYPCGHRCIDNCHPGLCKKAESCRKKVKVLCKCKRIKKDFSCMSIRAGEAIVECDEVCRKKKEELDRIKELEQEKKRKEEELKNQKEIEMFEKKFKPKRRGKDRHNNKEESNDNGNSYKWMWIIAVLIIGVSAAIVLTFQTNPDSLYYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470178;
- 90% Identity
- iTF_01466799;
- 80% Identity
- -