Basic Information

Gene Symbol
pnr
Assembly
GCA_036365515.1
Location
CM070876.1:174181886-174198405[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-06 0.057 15.8 8.7 1 27 521 546 521 551 0.94
2 2 1.1e-19 2.5e-15 58.5 7.1 1 35 576 609 576 610 0.98

Sequence Information

Coding Sequence
ATGAAGGAGGACCTCCAGAAGCAGGAGGTGAAGCACGAGTGGGACAACAACCGCCGGCCGGAGGGTACCTCACCCCACCACATCTCCACCGCGATGGACGatcagcagcagcaacagcggcAGCCACCAGCGGAGAACCCGCGCAGCGTGATAACGAGCCGTCGGCACGTGCGCACGATCACAGCGGCGGGTCACATCACCGAGACCCTAGCTGAGCCCGAACCCAGCTCACCCGAGAACGGCGAACAGATACCTCAGCAGCAGCATCATATCGTTCAGCAGAGGAATATTAAGCAGGAGAGCCAGGATGCACCGCCACCGCCGTACACTGAAGATCAGCatcagcagcaacagcagcagtatCACATTCAGATACAGCACCAGCACAGCCCAGAGCCACATCAGAGGGTGGGAGAGAACAAACACCAGCATGTGATTTATGCGACGGCGAACGGACAGGAGATCCAGGTGGAGGCTGCCGATGGAGCCGAGGCCACTATTGCTATGACTGTCGAGGAGCCGCAGAGGTACAATACCCCAGCTCCCGACCGCGTGGAAGTCGACGGCGTGACCTACGTGGCCTACGCGGACGACCCCGAGTTACGTCGCGACGCGCACGTAATAACCACCCAGGAGCACCAGCAACGTCAACAATCCATTTCCTCGTCCCAGGCGCCGACATCGGTCCACCAACGTTTCAGTCCGCACGAGTCCCACCAACCTGGCGCGCGGTACCAGACCTCGCCGAACGGCACTCCGGGCGGCGAGTACGAGGCTCAGGCAATGGTCGCCCAGGCCCCCGAACAGCAATCCGCCGCGGCTATGCACCTCAGTCCCGCGGACGCGCAGAACTACTCGCCTCCGCTCCAAGTTCTCCGAGCGCCCAACCAGCCACCTGCTAACCAGCAACAGCAGCATCACTTGGTGACCTACTCCGATGGCACCACTGCTATCAAGTACAACACCGGCGAGGTGATCGTCACCCCGGAGAACCTGAAGGCCTCCAGTACGTACACGACTCTGGAAACGGTGCCCCTACCGCCACCCCAGACCCCCTACACCCAGTACATCGCGACGAGCGAGAGCTTCCAGCAGCCCGGCGCCAGCTACTCCGGATTTCCCAAGCACCAGGAGATCTACATCTATCCGCCGTCCAGTCAGCCGTCGAGGTGTGGTGAGATGGAGCACCCGCCGTACATAAAGAGCGACCCGACGCTCACCTCGTCCTCGATAATGCGACCGAGCTACGAGCAGCCGTCGTCGCCGTCGCAGGTGAACCTCTACCAGAGCATAATCTACCAGGTGCCGAAACCTGGGGGCGATCAGTACTGGACGACCGGCGGTCCGGCGTCCCCGCCCCCTTCGTTCGACTACGTCCAGGCGGCGGGCTACACCGGCATGCCGGCGATCTCAGCGGGCGACGGCAGCGGCATGATCTTCTCGAGCGGTGGCTACGTGGCCAACGGGCCGCCATCCTGGACCACCGCGCTGCCGTTGCCCAACGCCGCTGATGACGGATTCGAGGGCCCGACGTCGCTGGCCGGCGGCGAGCCCAAGGAATGCGTCAACTGCGGTACGAACTCGGCGCCTCACTGGAGGAAGGACAACACTGGGTTGTATCTGTGCCACTGCTGCAAGACACAGAACATGAGCAGGATACCCGCACAGAGGGTCAAGCCCAAGGCGCCCGTGCCGCCGACTGGAGGCAGAAGGTTAGGCGTGAGATGTGCGAATTGCGGGACCACCACAACAACGCTATGGCGACGAAACAATAATGGCGAGCCAGTTTGTAATGCCTGCGGACTGTACTACAAACTCCATGGTGTGAATCGACCACAAAGTATGAAGAAAGAAGGCATTCAGACGAGGAAAAGGAAACCTAAGAATCATGCAAATGTAAATAACAATCACGGCGTGTCAAATGCAATTCACAAACAGGAAATCAAGTCAAGTCTACTTGTGGAGTCGAAGATGCAGTTGAGCATGTACGCGAACGGCACCGCCGGCGGTGACGGCAGCCCGATCGACGAGCATTACGCCGGGCCTGCGGTGAGCAGCGCGCTGCCAACAACCCAAATACCGCTGGCATTGCCGTCTTACGGTGCCGCACACTCGCCCCTAACTTTACCTTCCGCTGCCGTACTCAATCGACAAACGACACTTACcGTGCCACCATTAGAACCACCGAATAGTCGACCGAGCTCAGACCTGACATCGGTGATAACGTCGACCACCGCCGCTGCGCATACGACGAGCGCCGTCGAGCGATCGTAA
Protein Sequence
MKEDLQKQEVKHEWDNNRRPEGTSPHHISTAMDDQQQQQRQPPAENPRSVITSRRHVRTITAAGHITETLAEPEPSSPENGEQIPQQQHHIVQQRNIKQESQDAPPPPYTEDQHQQQQQQYHIQIQHQHSPEPHQRVGENKHQHVIYATANGQEIQVEAADGAEATIAMTVEEPQRYNTPAPDRVEVDGVTYVAYADDPELRRDAHVITTQEHQQRQQSISSSQAPTSVHQRFSPHESHQPGARYQTSPNGTPGGEYEAQAMVAQAPEQQSAAAMHLSPADAQNYSPPLQVLRAPNQPPANQQQQHHLVTYSDGTTAIKYNTGEVIVTPENLKASSTYTTLETVPLPPPQTPYTQYIATSESFQQPGASYSGFPKHQEIYIYPPSSQPSRCGEMEHPPYIKSDPTLTSSSIMRPSYEQPSSPSQVNLYQSIIYQVPKPGGDQYWTTGGPASPPPSFDYVQAAGYTGMPAISAGDGSGMIFSSGGYVANGPPSWTTALPLPNAADDGFEGPTSLAGGEPKECVNCGTNSAPHWRKDNTGLYLCHCCKTQNMSRIPAQRVKPKAPVPPTGGRRLGVRCANCGTTTTTLWRRNNNGEPVCNACGLYYKLHGVNRPQSMKKEGIQTRKRKPKNHANVNNNHGVSNAIHKQEIKSSLLVESKMQLSMYANGTAGGDGSPIDEHYAGPAVSSALPTTQIPLALPSYGAAHSPLTLPSAAVLNRQTTLTVPPLEPPNSRPSSDLTSVITSTTAAAHTTSAVERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01470165;
90% Identity
-
80% Identity
-