Taio117620.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus aiolomorphi
Gene Symbol
ush
Assembly
GCA_036365515.1
Location
CM070877.1:119478161-119486265[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0019 0.9 12.8 0.4 3 21 286 304 284 309 0.91
2 8 5.3e-05 0.025 17.7 1.3 1 23 349 371 349 371 0.98
3 8 0.027 13 9.2 1.5 3 21 414 432 413 433 0.92
4 8 0.018 8.7 9.7 4.4 2 21 679 698 678 699 0.94
5 8 0.084 40 7.6 0.0 3 20 726 743 724 745 0.91
6 8 0.021 9.9 9.6 0.0 2 23 784 805 783 805 0.95
7 8 0.0055 2.6 11.4 1.1 1 23 811 833 811 833 0.99
8 8 0.12 56 7.2 0.5 3 21 942 960 941 961 0.92

Sequence Information

Coding Sequence
ATGGTTCTGCTCGCACGACGGATTTCCGGTTTTAAATGGGAGGATGAGGAGTGGAGTGACTCGGAGAAGACGCCGTCCGTGAGCAGCGGCCTGGAGGGTGGCGGCTCCGCGGTCTCGAGCCCCACGGGCCAGCTGGCGGACGAGGAGCTTGTCGGCCTGCCGCCACCGCCCCGGCTCAATCAGGTCGTCGCCGCCAGCCTGACATCCGAGGACATCAGGCTCAGGTTGAGCGCTGCTGCGGCCCTGCCCGAGGAAGCGAGGAAACGACTCGCTTCCATCGCCGACGACTATGAGAGCTCACGAACGCACCGCAATCAGTGCCACTCGCAGGCGGGCGGACAGGTGCCGTCGCGGCCTAACTCTGTGCAGGATTTAAGTCCCAAGTCCACCTGCGTCGTCGACGAGGACTCGAACACCGCGGCGGGGCGCGACGAGGACGCCTCGGTCGGCGGCCGAGCCTCCTCGGCCTCGTCCTCGAGCACTGGCAGCAGTCGGCGGAATGCCGACTCGGCGAGGCGCTCCTCGGACGAGGTGGCGCACCACGAGCCCAAGAGGGCGAAGCTGGAGGAGGAGACGGTGGCTGTCGTCGCGCCACCGAGACTGAGACTGAATGCTAGTCTGGCGACGGACCCGGCCCTCAGACCGCAGGCCGTCGCCGCCCTCACCATCAAGCCCGAGAACGCGGCCTCGCCGCCACATTCCACGCCGGCACTCTCGACGGGCCTTCAAAATGCGATAGCCACGGGTCGCCTGTTCATGCTGCCCAACGACGGCAAGGACGGCCTGGGCGTGGAAGCTGCTGCGGTCGCTGCAGCCGCCGCAGCAGCCGCTGCCTCGAGACCCACCGCCCTGATCTGTCCGCCCTGCGGCATCCGGTTCAGCTCGGCGAGCACTCTGGAGGCCCATCAGAAGTACTACTGCTCGCACAGGCCGCGACTGGAGAGCGACGCCGAGAACAACGACGAGGACGATGAGAAGTCCGGCGGTGGCGGTGGTAGTTCTGCCGGCGGCAGCGGCAACGCCAAGTTCGAGTCGCGGAAGGCCTACGCCTGCCCGCACTGCTCCTACAGCGCCGACAAGAAGGTGTCGCTGAACCGGCACATGAGGATGCACGCATCCTCGCCCGTGCAGTCCATTCAGCCCGCCTCGGCGATGCCCGTCGGATCGGCCCAGTCGACCGGCCAGCACAACAGTATCGTCGCCTCCAACGGATCGCTCAACGAGGAGGCGGAGAGATACTGCCGGAACTGTGATATCAGGTTCAGCTCGCAAAGGACGTACCGGGCGCACAAGATGCACTACTGCAGTACGAGGCACGTGGTGAAGGACACGCCGACGGTGGGCGCGAGCGCATCTGGCAGCGGCTCGGCGAGCGCCTCCTCGCTCAAAGGCTCGCCGCCGACGAGCTCGAGCCCGGGCGACTCGCCACCACCGCAGCCCTGCCTGGCGCTACCCACGAACCCCATCATCATCGTGCCGTACTCGCTGGTGCGCGGCGCCTCGGTACTTGCCGCCCCAGGACTTCCTGCTCCGGACACGCCCTGCTTTCTCATGCCCAACGGCCAGCTGCAACCAATGACGCGCGGCCTCACCACCTCTACCAACACGGCGCCGACGACGATCACGTCGAGCAACGTCCTCGTCACCCTCGACTCGCCGTCGACGACCTCGACGCCCGGCGCGAATGTCGCCACGAGCGTCCTCAGGGCGGCCAATAAACCAGCGACGCCCATCGCTCTACCGCCACCCACCGCCAGCTCGCCCAACTCTGCCGCTTCAGCGCCCCTCGATCTTAGCGTCAGGAGATCACCCGACCACGAGAAGGAGAACCGAGGGTCGCCGCTACCCTCGTCACTACCACCGGCGGGCAGTCCGCGCTCCCGGGGCAGTGCGAGCCCGCGCGCTCGCTCCCAGCCGACGGCCCAGGCGCTCGACCGGATCCCGCCCACGCCGCCCACGACCGAGCTGGCGCTGCGACTCGCCGAGCTGCCTCCGCCGCCCGTGCCCGGCGTCCTCGTCAAGCAAGGCGTGTCCAGGTGTAAAGAGTGCAACATAGTCTTCTGCCGGCACGAGAACTTCGTCGCTCACAAGAAACACTACTGCCAGGCCCGTGAGACGAGCGTGACGAGTCCGCCGCCACCGGGAACGCCCTCGCCGCCCCTCGTCCAGCTGATCTGCGCCGCCTGCGGCATCAAGTTCGCCTCCATGGACAACCTCGTGGCCCATCAGGCCTTCTACTGTCCGAAACGAGTCGAGAATCAGGATCATCACGCGCGATGCCCAAAATGCAAGACGGTAATCGAGCCGGGCGTCACGCACACGTGCACGAGCGGACAGACGGGCGGTTGGCGATGTCCGGTCTGCGGGGCTGTCAGTCCCACTGCAGGTGCGGCCCAGCGTCACATGGATGCCCACCAAGGCGTCAAGGCGTTCCGATGCTCCATTTGCCAGTACAAGGGCAACACGCTCCGCGGCATGAGGACGCACATTAGGATGCACTTCGAGAAGCGCGGCGCTGATCTTCAGGAGGAGAACTACATTACGTGCGTGCTGGACGACGATCTGACGGTGCCGGCGACGGATCCCGCCCCAGCCGCCACTCCCGAGGAAGTTTCCACGGACGCGCAGCAGATCAACGGCAAAACAGAGCAGCCGACCGTACGCAAGAGTCCGCAGCCGGCAGCGCCGCCGGCAGTCGTCGCCAGCTCGCCGCCGGCCGTCTCCCCGGCGCCGTCACCCGCGACGCCCAAGCTCGTGAAGCAGGAACGCGAGGACACGCCACCACCGGAGGACAACCCGGACACCAAAAGCGGACCGCGCTACTGCCGCTCCTGCGACATCAGCTTCAACTATCTGAGCACCTTTATAGCCCACAAGAAGTTCTACTGCTCGAGCCACGCGGGCGAGGCGAgcaacaacaataacaacaacaacaacaacgcgAGCGCCGCGGCGACGCCTGCACCGGCTGCGACATCGGCCACGACGCCGCCGGCTGGCCGCACCGAGGCCTCCGTGCTctaa
Protein Sequence
MVLLARRISGFKWEDEEWSDSEKTPSVSSGLEGGGSAVSSPTGQLADEELVGLPPPPRLNQVVAASLTSEDIRLRLSAAAALPEEARKRLASIADDYESSRTHRNQCHSQAGGQVPSRPNSVQDLSPKSTCVVDEDSNTAAGRDEDASVGGRASSASSSSTGSSRRNADSARRSSDEVAHHEPKRAKLEEETVAVVAPPRLRLNASLATDPALRPQAVAALTIKPENAASPPHSTPALSTGLQNAIATGRLFMLPNDGKDGLGVEAAAVAAAAAAAAASRPTALICPPCGIRFSSASTLEAHQKYYCSHRPRLESDAENNDEDDEKSGGGGGSSAGGSGNAKFESRKAYACPHCSYSADKKVSLNRHMRMHASSPVQSIQPASAMPVGSAQSTGQHNSIVASNGSLNEEAERYCRNCDIRFSSQRTYRAHKMHYCSTRHVVKDTPTVGASASGSGSASASSLKGSPPTSSSPGDSPPPQPCLALPTNPIIIVPYSLVRGASVLAAPGLPAPDTPCFLMPNGQLQPMTRGLTTSTNTAPTTITSSNVLVTLDSPSTTSTPGANVATSVLRAANKPATPIALPPPTASSPNSAASAPLDLSVRRSPDHEKENRGSPLPSSLPPAGSPRSRGSASPRARSQPTAQALDRIPPTPPTTELALRLAELPPPPVPGVLVKQGVSRCKECNIVFCRHENFVAHKKHYCQARETSVTSPPPPGTPSPPLVQLICAACGIKFASMDNLVAHQAFYCPKRVENQDHHARCPKCKTVIEPGVTHTCTSGQTGGWRCPVCGAVSPTAGAAQRHMDAHQGVKAFRCSICQYKGNTLRGMRTHIRMHFEKRGADLQEENYITCVLDDDLTVPATDPAPAATPEEVSTDAQQINGKTEQPTVRKSPQPAAPPAVVASSPPAVSPAPSPATPKLVKQEREDTPPPEDNPDTKSGPRYCRSCDISFNYLSTFIAHKKFYCSSHAGEASNNNNNNNNNASAAATPAPAATSATTPPAGRTEASVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01466611; iTF_01470033; iTF_01469171;
90% Identity
iTF_01466611; iTF_01470033; iTF_01469171;
80% Identity
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