Basic Information

Insect: Torymus aiolomorphi
Gene Symbol: mecom-b
Assembly: GCA_036365515.1
Location: CM070873.1:261390652-261409582[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.018 8.6 9.8 0.5 2 23 220 242 219 242 0.92

2 9 0.37 1.8e+02 5.6 0.7 1 23 249 272 249 272 0.93

3 9 0.00015 0.07 16.3 0.7 1 23 278 305 278 306 0.91

4 9 6e-06 0.0029 20.7 2.6 1 23 312 334 312 334 0.95

5 9 1.7e-05 0.0084 19.2 4.9 1 23 340 362 340 362 0.99

6 9 0.079 38 7.7 0.5 2 21 370 389 369 390 0.94

7 9 3.1e-08 1.5e-05 27.9 1.7 1 23 804 826 804 826 0.99

8 9 4.5e-07 0.00022 24.2 1.7 1 23 832 855 832 855 0.97

9 9 9.3e-06 0.0045 20.1 3.5 1 23 861 883 861 883 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.018	8.6	9.8	0.5	2	23	220	242	219	242	0.92
2	9	0.37	1.8e+02	5.6	0.7	1	23	249	272	249	272	0.93
3	9	0.00015	0.07	16.3	0.7	1	23	278	305	278	306	0.91
4	9	6e-06	0.0029	20.7	2.6	1	23	312	334	312	334	0.95
5	9	1.7e-05	0.0084	19.2	4.9	1	23	340	362	340	362	0.99
6	9	0.079	38	7.7	0.5	2	21	370	389	369	390	0.94
7	9	3.1e-08	1.5e-05	27.9	1.7	1	23	804	826	804	826	0.99
8	9	4.5e-07	0.00022	24.2	1.7	1	23	832	855	832	855	0.97
9	9	9.3e-06	0.0045	20.1	3.5	1	23	861	883	861	883	0.99

Sequence Information

Coding Sequence: ATGGATCTTTGCGTTGCGAAAGTTTCTAATACAACTGCAGCTATTCGATTCACCTTGCGCCGAAATCTCATTGATTTATACAACACCTACATGTTTGCACATGCAGCGTTATCAACCATCGACAGCTGCTGCTACTTCCTGAATATTACATATCCATCAGCACAACACATCTCTATCAAAATCCATCACGCCCCATCCAAAAGTGCATCGACCCTCCCACCCCGTCCACCTTACATCGATTCGTTCTCACCCGCATCACATCCAGCATTGTTTATCCTCACGCCTCGCATCACATTATATAACGCAACGCAACTCGCCCTGAAAGACGACGACGTTCCGACCCGGTGTCACGCAGAAAACGCGCATAGGatgtTATATGGATGGAAACTGCATACAGAAACGTTGGAAGATTTTAAAGACTGGACGAGGTATATTCGAGTGGCAACGAATCCGGACGAGGCGAACGTGAGGAAAATCAAAGACAAAGATGGAAATACGTACTACGAGACAATCCGGGCGATCGCTACCCGGGAGGAGCTGCTGAAGCCGCGCCGGCTGAACAACGAGGACGAGAACACGAGCGAGTACGctTCGCAACATAGTGGTGCTTCTCAACACGCTGACGAAGATAGGGAAGACGAAGAAGACGGAGAAACTCGGTGTACAGTTTGCGATAAGCCGTTCCAGGATATTGAAGTACTGAACAATCACTTGGTGATCTGTCACCGATATCCAGCGCGCGAACATTGCTGCTCGTCTTGTCCGAGTGCGTACGCCTCACGGCCTCTACTAGTCCGCCATAGGGCTATTGTTCACGGCGACATACGCAAGTACCCGTGCGAGAACTGCTCCAAGCCGGACCATCCGCAGGTTTTCACTGATCCATCGAACCTTCAACGTCACATCAGGGCTCATCACGTCGGAGCGCGTAGCCACGCGTGCACCGAGTGCGGCAAGACTTTCGCTACGAGCTCAGGTCTAAAGCAGCATACCCACATACACAGCAGCGTCAAGCCGTTCCAGTGCGAGGTTTGCTTCAAGGCATACACGCAGTTCTCCAATCTCTGTCGACACAGGCGCATGCATGCCAAATGCCGCATGCAGATCACCTGCGCCAAGTGCAACGCCCAGTTCAATACGGTCACCTCGTTATCGAAACATAAGAGATTTTGCGACTCTACAGCGGCGCCGACGTCCAGTTCAGTTTCTAATATGCCTCAACCGCAACCGAATCCTTTCCTATTCCCGCGTCAGCCGTTACCGTTCTATCCTCCGAGTATCATAGGTCATTACTCTGCCTCGCTGTTGCGTAGGGCGAATAATTTGTTAGGATTACCGGGACTGCCGGTGTTATTTCCGCTAAAGTCCGACGAGGCCGCGGAACGATGTTCCAGTGAACAGCAACAGTCGCAGCAACAGCGCCCGGAGAGTCCAAGACAAGACAGGTATTCGCCGTCAAGAGGTTCTTACTCGGTCCAGGCGGTTCAGCAGCAGATGCAGTCAAACGCCAGTAAAGTGTCGCCTTCGGCTGCCGAGGAGGCCACATCCAGTCTGAGACCCTCGCCCGCTCGACCGCCTCCAGCTCAGCAGGAACGCGAGGAGTCGAGCAGCCCCAAAAATATGACTACACAACCAGAGCAACAAGCGCAGAAGCGTAAACATCGTCATAGCTCTGAAGAAGCTGAGGAACAGCAGTCGACTTCTGGTTCAGAACAGCCTCTCGACTTACGTGTGCAAACGAAACGCCGAAAGAATTCTGACACACAACCAACAAGTAGCCAAGAAACAGATCTAGAGATCCAATCAGAGCTTGAACCCACACCAGAGAAAAAACGAATCGAATACAGCAGTCCAGAGGAGCAAGCGACGCCCCAGTCGCGACCCTCTAGCCGAGTTAAGAGTGAGCAGCAGCGCAACGAGCGTGAACCATCGGAAACCAAGGACATGGGCAACCCGGTGGTGCGCAGCAACCACCAGGCCCCGCAAGCGGAAACTCGGCAACAACAGCAGCCCCAGCAGCAGCAACCGACAATAGAAAGGACCCCAACGCCTCCACCTCCATCGATGCCGCACATGGCGTACCCAAGGCCTATCCACCCACTGTTCATTGAATCGATGAATTTGTACCGCAACGGTCCGGGCACTTTCCCGAACTTCCCCGGAGCAGTGCCGAATGCAGGTAGCCCACTCCAGCCGCTGCCCTCGTTCGGGCCCTCTCGCAGCCTACCCTTCCTTGGCTCTCTGATGAACGGTCTTGGCGGACCCAGACCCGGTGCCGGATACGACGTCCTTCCGCGACCCCCATTCGGCAACTTCGCTGGCGTCAAACCCTTCCAGGACTCGGTGATGGGCCATCATCCTCAGTCTGGCGGACCCTTCGCCACGGGTCCCGGTAAGAGCAAGGACCGCTACTCATGCAAGTTCTGCGGCAAGAACTTTCCGCGCTCGGCAAATCTTACGCGGCACTTGAGGACTCACACGGGCGAGCAGCCCTACAAGTGTAAGTACTGCGAGCGTAGCTTCAGCATCTCCAGCAACCTGCAGCGCCACGTGCGCAACATCCACGACAAACAGCGGCCCTTCAAGTGCCCCATGTGTGAACGCTGCTTCGGTCAGCAGACGAATCTCGACCGGCATCTTAAGAAACACGAGGCTGACGATGGCAGCGGTGTCGTTTCGGTGGCAGATTCAGCGGATAGTAGCAACGAAAACGAGCGCGAGGAAACTTCGACGTACTTCGACGAAATCAGGTCGTTCATGGGTAAGGTGACTTATGGAGCCGATAGCCCATACGGTCTGGCCCCGCATCATCCGGCTTACCTGCCGAGTAGACTACGAGATGTCCATGAGGTGCAGGACCTTATGGACGGCGTTGTCGGCAAGAGCAagtacgacgacgacgaagagaGCGAGGATCGGGTGTCACCCCTGGAGCAGGCTAACGTGATGTCGCCCATTGATCCCAAGATATCCTCACCCTCGCAATTCGATCTGAAGCTCAGCAGTAAGTGCGAGCTGCTGAACAACAACACGGCCGAGCCCGTCATCGAGATCTCGACATAG
Protein Sequence: MDLCVAKVSNTTAAIRFTLRRNLIDLYNTYMFAHAALSTIDSCCYFLNITYPSAQHISIKIHHAPSKSASTLPPRPPYIDSFSPASHPALFILTPRITLYNATQLALKDDDVPTRCHAENAHRMLYGWKLHTETLEDFKDWTRYIRVATNPDEANVRKIKDKDGNTYYETIRAIATREELLKPRRLNNEDENTSEYASQHSGASQHADEDREDEEDGETRCTVCDKPFQDIEVLNNHLVICHRYPAREHCCSSCPSAYASRPLLVRHRAIVHGDIRKYPCENCSKPDHPQVFTDPSNLQRHIRAHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHRRMHAKCRMQITCAKCNAQFNTVTSLSKHKRFCDSTAAPTSSSVSNMPQPQPNPFLFPRQPLPFYPPSIIGHYSASLLRRANNLLGLPGLPVLFPLKSDEAAERCSSEQQQSQQQRPESPRQDRYSPSRGSYSVQAVQQQMQSNASKVSPSAAEEATSSLRPSPARPPPAQQEREESSSPKNMTTQPEQQAQKRKHRHSSEEAEEQQSTSGSEQPLDLRVQTKRRKNSDTQPTSSQETDLEIQSELEPTPEKKRIEYSSPEEQATPQSRPSSRVKSEQQRNEREPSETKDMGNPVVRSNHQAPQAETRQQQQPQQQQPTIERTPTPPPPSMPHMAYPRPIHPLFIESMNLYRNGPGTFPNFPGAVPNAGSPLQPLPSFGPSRSLPFLGSLMNGLGGPRPGAGYDVLPRPPFGNFAGVKPFQDSVMGHHPQSGGPFATGPGKSKDRYSCKFCGKNFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPMCERCFGQQTNLDRHLKKHEADDGSGVVSVADSADSSNENEREETSTYFDEIRSFMGKVTYGADSPYGLAPHHPAYLPSRLRDVHEVQDLMDGVVGKSKYDDDEESEDRVSPLEQANVMSPIDPKISSPSQFDLKLSSKCELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01469960;
90% Identity: iTF_01468270;
80% Identity: -