Basic Information

Insect: Torymus aiolomorphi
Gene Symbol: gtf3a
Assembly: GCA_036365515.1
Location: CM070877.1:129334893-129338827[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.9 4.3e+02 4.4 0.4 1 11 607 617 607 629 0.81

2 17 0.49 2.4e+02 5.2 2.7 1 19 635 653 635 655 0.91

3 17 1.4 6.7e+02 3.8 0.7 2 23 662 683 661 683 0.95

4 17 0.0043 2.1 11.7 1.3 3 23 692 713 691 713 0.97

5 17 0.001 0.48 13.7 2.3 1 23 720 743 720 743 0.98

6 17 0.00045 0.21 14.8 1.2 1 23 749 772 749 772 0.94

7 17 1.6 7.5e+02 3.6 1.0 2 23 780 800 779 800 0.92

8 17 9.2e-07 0.00044 23.3 4.4 2 23 806 827 805 827 0.97

9 17 6.4e-06 0.0031 20.6 0.2 1 23 833 855 833 855 0.99

10 17 0.00057 0.27 14.5 3.2 2 23 867 889 866 889 0.95

11 17 0.014 6.9 10.1 0.3 1 23 895 918 895 918 0.94

12 17 0.011 5.5 10.4 2.9 2 23 940 962 939 962 0.95

13 17 0.00087 0.42 13.9 1.0 2 23 969 991 968 991 0.96

14 17 3.6e-05 0.017 18.2 1.2 2 23 999 1020 998 1020 0.96

15 17 0.00063 0.3 14.3 1.1 1 23 1026 1049 1026 1049 0.96

16 17 0.4 1.9e+02 5.5 4.3 2 23 1056 1077 1055 1077 0.96

17 17 0.0047 2.3 11.6 2.7 1 23 1083 1105 1083 1105 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.9	4.3e+02	4.4	0.4	1	11	607	617	607	629	0.81
2	17	0.49	2.4e+02	5.2	2.7	1	19	635	653	635	655	0.91
3	17	1.4	6.7e+02	3.8	0.7	2	23	662	683	661	683	0.95
4	17	0.0043	2.1	11.7	1.3	3	23	692	713	691	713	0.97
5	17	0.001	0.48	13.7	2.3	1	23	720	743	720	743	0.98
6	17	0.00045	0.21	14.8	1.2	1	23	749	772	749	772	0.94
7	17	1.6	7.5e+02	3.6	1.0	2	23	780	800	779	800	0.92
8	17	9.2e-07	0.00044	23.3	4.4	2	23	806	827	805	827	0.97
9	17	6.4e-06	0.0031	20.6	0.2	1	23	833	855	833	855	0.99
10	17	0.00057	0.27	14.5	3.2	2	23	867	889	866	889	0.95
11	17	0.014	6.9	10.1	0.3	1	23	895	918	895	918	0.94
12	17	0.011	5.5	10.4	2.9	2	23	940	962	939	962	0.95
13	17	0.00087	0.42	13.9	1.0	2	23	969	991	968	991	0.96
14	17	3.6e-05	0.017	18.2	1.2	2	23	999	1020	998	1020	0.96
15	17	0.00063	0.3	14.3	1.1	1	23	1026	1049	1026	1049	0.96
16	17	0.4	1.9e+02	5.5	4.3	2	23	1056	1077	1055	1077	0.96
17	17	0.0047	2.3	11.6	2.7	1	23	1083	1105	1083	1105	0.98

Sequence Information

Coding Sequence: atggcCACTTTTGACCCAGCTCAATTGTCAGAAAATGAAGATCACAATTACAGTGATCCTCATCTAGTAGAAATTGGTggtaaaaacagtaaaaattttaaaactaatattatatattcaaaGGTGTCTAATTCAGGGAAAGAAAAGTATATTGGattgaaaataacaaatatcagtgatttgaaaaaagcaaCACCACATCTTAAATTGCCAACATTATTATCATCGTCAATCTCAAAGAAAACTCCTGTAGGAACTACAGTTCCTGAAGAAATTAAGCAAAAATTACATAACTATTGTAGGACTTGTGCTGGATTAAAAGTTCCCCTAGTTGATATTTTTAGTGAAAAGGGGGTTCAAATGAGATTGAGTCAACAAATACAACACTTAGAAGATATTAATGAACATGAGAGTTTATCAACTCAAATGTGTATGGACTGCATTTGTGACATGAAAatgagctataaattttttatgcaaataaaaaaagctgaaatgaaattaaaatcaatttgtaACTCACTTAGTGATTCTCTGACTAAATCAAGTGAAGATAGCATTGAAGATCAAAGAAAATCAAATAACGTAATTGATCCTTTAGCCAATGAATCATTAAATACTATTACCAATAGTGATCTTGTTGATGAAGTTATGGATAAGGAGTCAAAAGTCGATGAATGTTGTGAAACAAATGAAATTTGCAATGATGAAAATGAATCATTCGAAGAGTTTGACCCTGACAACCCTCATGAAACAAATGAAAAagatatgaataaaaataaagaatgtgaAATTTCTGGAAAAGAAAATCAACATAATTATTCTTATAGGTATGATGAATCATTGAATGCTTATGTTAAAATTAATCCTCctgaaaaaacacaaaaatgtGTCAGTAAACAAGAAAAGGTAACAAATAGTGAGAATATTAATAAAATCGTTTCTACAAATGCACAGAATCcattgaaaagaaaattatcaggtgaaaatataaatgatgaaattgataATTCTTCCAAGAAATTAAGCATTGGTTTAAAGGATTTAAAGCTTccaaaattaaatattcatgATGCTACAAGTATAACCACACAAGAAGATGGTGTAATGTATGTTACTACAAAAGGATCAAAACCCAATGAAAtgcttttaataaaagttaAGAAAATGGATAAAATATCAGAAAAGAAAGgagataaaacaaaaaaaaaagattcatcaatgttacataaaatattttccaaatatgaAAACAGTAGTAGCAAAGGCAGCTATATTGATGAACAAATAGAAGAATACAAGAAGAAAAGAGTTCAAATCTTAGGAGAAACTGCCAATATAATAGAAACAGATCTAGAAGAAGAAGTACGAGAGACTAGAATAGCAGGTCGGGATAATTGTAACAATTCAGAAACTTGTGACCAACCTCATAATGAAGAAAATCAAAGAAATGAAAGAGTCCAAACCaatgtttcaaaaattattagtGAAGTACCTGCTAGTTCATTAGAATCAGCATCCAATTCAGAAAAATTAACACACAAATGGAAAAGTATCAAAAATAGTCATGCTGCTCTCAATAAAGATTTAGCTGAGGATTGTACTCCTAGATTAAGATCTGTATTAAAACAAAAAGATGAATATATCCGCGAATTTGTTAACTATTTGAAACAGCGAAGAATTGTGGTATCCCGTTTAAGAGATGAAGACATAATTTCActatatgaaattaaaaacaatgtAATTTTAGATAGAGAACCAGTGATGGTTGTAGAAGATGAATCAGAAAATATCGATccatttgaatttaaaaagagttaTGAATGTGACTTTTGTGACCAATCATTTCCTGCTAGAGAAATGGAGTTTGAACATTcaaaaattcatgattttaaaTTAATGCATTACTGTGAAGATTGTAAACAAGAATTTACCACACATAAAGCAAAACGGAGTCATAATATGGAGTGTATTCAAAAGCTAATGTGTAAATATTGTGATGGTGTATTAGAAtctaaaggaaaaaaaagacaACATGAACAAAAACATTGTGATGAACTATATGGACAACTGTGTGATTTATGTGGTgaaaaattcaaacatttagGTACTTTAGATCAACATGTAAAATCTCGTCACATgcaattagaaaaaattttcaaatgtcCTGAGTGTTCAAAGAAATTTGCATTCAGAACTAAATTGACTTTTCACATCAAAACTGTACATACAACTTGCAGAGCTTTTTTATGTGAAGATTGTGGATCTGATTTCAAAAATCCTGCAAGTTTAAGACATCATAGAATACGAAAACACCAACCATCTAATAATAAAAAGGAGTGTCCTGAATGTCAGAAAATGATTCCAGTCTACAGTATGTCAAAGCACATGCATACACATAAAGCATACAGCATTCATTGCCCTCACTgtgataaaatgtttaaaaatagttCGACATTAAAACAACATCTTAGAATTCATGAAGATCAAAGACAGTATAAATGCGATGAGTGTGGGGTTGGCTTTAATAGACGAGATGGCTTAAGGCTTCACTTAAAGGTTCACCAGAAAAGTGATAGTAGAGGATTGAAAGAATGTTCATGTCAGATTTGTGGTGAAAAATTTCCTAATCATTCAACACTTGTAATTCACAGAAACCGAACGCATAAAGATGGTAGAAATTATACGTGTCATATATGTAATAGATCTATGATATCTGTTCGATCCCTAGAGTGGCACCTGGCAAATATACATAATGAAACAATGCCAGGTGTTGTAAAAGATGATTCTAGTATAGATGTTGAAACTAAACGAGTATCTTGTTACCACTGtaacaaaacattcaaaacagAAATGATATTGAGAACACACATAAAAAATTCCCATGTCCAGAAAGAACCAATGAAATGCTTAGATTGCGAATTAACGTTTACTTCTGAAGTTCGTTTAAAGCATCATATGATGATTATCCATAATCGTATAGAAGGAACTTTAGAATGTCCTCATTGTCCTAAGAGGTTTGTCAATCAACTAAGGCTTAAAACTCACATGATTTCTCATTCAGATGAAAGACCATATACCTGTGATGAATGTGGATTtatgttaaaaacaaaaatacagTTAATCAAACATAAACAAAACAGACACAGTAATGAAAGACCATTACAATGTAAATATTGTTCTTGGAGATGTAAACAAGTCAGTGCTTTAGTTTGTCATGAAAGAACACATACAAATGAAAGGCCTTATAGTTGCAGTGTCTGTAAACAAAGATTTAAATATTTAGGGgataaaaataaacatgaaaGACGACACGAAATTCTTGGAGGTACTGGATTTAAAAGAATTGTTACTGGTAGAAAtacaagtaaaattaataaaaaaaaggaatatgATTCAACTGAACAGGAGTCTGATCAAGAGCAGGAAGAATATGAAATGGGAGAAACAAAGGAGGAATTTGAAGAGCATATTGAAGGCGAACTAGAAAGCTTTGATGAGTCACAAATTGTTAAATTTGAGGATGAAGAAATCATTACTGAAGAATCTCAGGCCTCGTTTGAACCAATGTATACAGAAGATATGTCATCAGATACTAACAATGATACAACTAAAGCTGTAATGGGAATGGAAGATACAACTATCTACACAGAAGAAGTTACAGCAGATGATGTTGAACCTGAGCTGATTACTGATGATATACCAGATGAACATATGTTACAAGCAGGAACCCTAGTTCAGTTAGGACAACaggatgaaaatggaaaaattcaagTAATACCTGTCATGTTTTCTTTACCAGATTTGTCAGATGCAACTTCTGAAGTTGGTCTAGCAACAACTTCTATAATGTACAATAATTAA
Protein Sequence: MATFDPAQLSENEDHNYSDPHLVEIGGKNSKNFKTNIIYSKVSNSGKEKYIGLKITNISDLKKATPHLKLPTLLSSSISKKTPVGTTVPEEIKQKLHNYCRTCAGLKVPLVDIFSEKGVQMRLSQQIQHLEDINEHESLSTQMCMDCICDMKMSYKFFMQIKKAEMKLKSICNSLSDSLTKSSEDSIEDQRKSNNVIDPLANESLNTITNSDLVDEVMDKESKVDECCETNEICNDENESFEEFDPDNPHETNEKDMNKNKECEISGKENQHNYSYRYDESLNAYVKINPPEKTQKCVSKQEKVTNSENINKIVSTNAQNPLKRKLSGENINDEIDNSSKKLSIGLKDLKLPKLNIHDATSITTQEDGVMYVTTKGSKPNEMLLIKVKKMDKISEKKGDKTKKKDSSMLHKIFSKYENSSSKGSYIDEQIEEYKKKRVQILGETANIIETDLEEEVRETRIAGRDNCNNSETCDQPHNEENQRNERVQTNVSKIISEVPASSLESASNSEKLTHKWKSIKNSHAALNKDLAEDCTPRLRSVLKQKDEYIREFVNYLKQRRIVVSRLRDEDIISLYEIKNNVILDREPVMVVEDESENIDPFEFKKSYECDFCDQSFPAREMEFEHSKIHDFKLMHYCEDCKQEFTTHKAKRSHNMECIQKLMCKYCDGVLESKGKKRQHEQKHCDELYGQLCDLCGEKFKHLGTLDQHVKSRHMQLEKIFKCPECSKKFAFRTKLTFHIKTVHTTCRAFLCEDCGSDFKNPASLRHHRIRKHQPSNNKKECPECQKMIPVYSMSKHMHTHKAYSIHCPHCDKMFKNSSTLKQHLRIHEDQRQYKCDECGVGFNRRDGLRLHLKVHQKSDSRGLKECSCQICGEKFPNHSTLVIHRNRTHKDGRNYTCHICNRSMISVRSLEWHLANIHNETMPGVVKDDSSIDVETKRVSCYHCNKTFKTEMILRTHIKNSHVQKEPMKCLDCELTFTSEVRLKHHMMIIHNRIEGTLECPHCPKRFVNQLRLKTHMISHSDERPYTCDECGFMLKTKIQLIKHKQNRHSNERPLQCKYCSWRCKQVSALVCHERTHTNERPYSCSVCKQRFKYLGDKNKHERRHEILGGTGFKRIVTGRNTSKINKKKEYDSTEQESDQEQEEYEMGETKEEFEEHIEGELESFDESQIVKFEDEEIITEESQASFEPMYTEDMSSDTNNDTTKAVMGMEDTTIYTEEVTADDVEPELITDDIPDEHMLQAGTLVQLGQQDENGKIQVIPVMFSLPDLSDATSEVGLATTSIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01468266;
90% Identity: iTF_01466535; iTF_01468266;
80% Identity: -