Taio060401.1
Basic Information
- Insect
- Torymus aiolomorphi
- Gene Symbol
- -
- Assembly
- GCA_036365515.1
- Location
- CM070875.1:26407338-26414305[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.0013 0.6 13.4 3.5 1 23 81 103 81 103 0.93 2 26 2 9.6e+02 3.3 0.5 1 23 175 198 175 198 0.91 3 26 1.5 7e+02 3.7 2.0 1 23 285 308 285 308 0.95 4 26 7.9 3.8e+03 1.4 8.0 1 23 320 342 320 342 0.95 5 26 0.012 5.7 10.3 0.9 1 23 354 377 354 377 0.96 6 26 0.055 26 8.2 3.2 1 23 394 417 394 417 0.96 7 26 2.5e-05 0.012 18.8 0.6 1 23 423 446 423 446 0.96 8 26 0.0017 0.8 13.0 0.9 2 23 452 474 451 474 0.94 9 26 0.0075 3.6 11.0 0.4 1 23 479 502 479 502 0.96 10 26 9.3e-07 0.00045 23.2 0.9 2 23 509 530 509 530 0.97 11 26 6.7e-06 0.0032 20.5 0.5 1 23 536 558 536 558 0.96 12 26 1.3e-06 0.00063 22.8 0.1 1 23 564 586 564 586 0.98 13 26 0.62 3e+02 4.9 0.5 1 23 781 804 781 804 0.95 14 26 1.6 7.7e+02 3.6 1.1 1 23 829 852 829 852 0.91 15 26 0.035 17 8.9 0.2 2 23 981 1003 980 1003 0.96 16 26 0.32 1.5e+02 5.8 1.6 2 23 1075 1097 1074 1097 0.94 17 26 0.41 2e+02 5.5 0.4 1 23 1207 1230 1207 1230 0.95 18 26 3.3 1.6e+03 2.6 0.3 1 11 1242 1252 1242 1264 0.81 19 26 0.037 18 8.8 2.1 1 23 1277 1300 1277 1300 0.98 20 26 0.037 18 8.8 3.0 1 23 1313 1336 1313 1336 0.96 21 26 7.2e-05 0.034 17.3 1.7 1 23 1342 1365 1342 1365 0.95 22 26 0.00089 0.43 13.9 1.2 3 23 1372 1393 1370 1393 0.93 23 26 0.0024 1.1 12.5 0.4 1 23 1398 1421 1398 1421 0.97 24 26 4e-05 0.019 18.1 0.6 2 23 1428 1449 1427 1449 0.97 25 26 7.8e-05 0.037 17.2 0.4 1 23 1455 1477 1455 1477 0.98 26 26 1.9e-06 0.00089 22.3 0.8 1 23 1483 1505 1483 1505 0.96
Sequence Information
- Coding Sequence
- ATGGGCATGGCTTTCACAGGATTGCgGTACCCTGACGAATCGGCGGACTTCGAGACCATCGGAGACATACCCACGAAGACGTCGACGGCAGCCGCCACCAGGACGCCAGTGGCCAGCGCAAAACCCAGCTCCTCATCGATGACGCTTTATCAGATCTCCTACGTGGACGGTAAACCCTCGTACTCGCTCGTGCCGATCAAGAAGAAGGCCGAGACTCCGCCGTCGAAAGGGTGCAACGAGTACGTATGCCACGAGTGCGGCCTTAAGTTCACCACGGAGTCGAGACTGAAGTGGCACTGCGCGACGCACAGCCCGCTGAAGAACAGAAAGCAGCAGTCTAAGATAAAACCGATCGTGAAAGAGCCACCACCGAGGAACGAAGTCGTCAAGGTTATGAGTGAAAGTAATAACCGGGTGCTGGCAAAGAAAGTCCGTAGACGCAATCCTCCGAAGTCTGTCGCCAAGCCGACCAGGCTCGAGAAGCCTCGCAAGACTGGTCAAATGAACGACAAAGGCCTCACGTTTATCTGTCCATCCTGTGAGTTCAGCACGAACGACCGGTCTGTCATGATCAACCACTTCACCTCGACTCATTGCTTTAAGACCGAGCTGAAGGTTGAGCCAAAGAGCGAGGAACAGATTTTATCCGACGAAGGAGCAATATTTGAGGTATACGAGGACGCGAGCCATCATCAAGACATCGGGGCCGAAGAGGAGGTAGTAGAGATGCAGGAGGTGTACGCCGACGAGGCCACAATCGAGCAGCTGCAGTGCGCCGAGTGCGGCTTCACCGGCTACACCCAGGACGACATCGACTTCCACACGTGCGCCCAGGCCACCGGCGAGCAGCTGTTCTCCTGTCCTCTCTGCACCTACGAGTGCCTCACTCGCATGGGTCTGCAGAGCCACATCACCCGCAAGCACAAGCCAAAGCCCGCAGAGGGTATGCCACGCACGTACGACTGCGACTGTTGCGATTTCAAGTGCAACAACAAGAACACGCTGTACTCGCACAGGCGCAAGCACCGCAACGGCGAAGAAATCACGGACGAGAAGAACTTCTTCTGCAACGATTGCGAGTTTGGTGCGCGCACCAAGAGCGCCCTGTATCTCCACATAAAACGCAGGCACAAAGTCGATGACGGGCCCGGGGACCCCAAGCCCACTCGGCCGGATATGTACAAGTGCGAGCACTGTGACTACACCAACAAGAATCGCTACGAGATGAAGGTCCACGTGATCAGGAAGCACACCAACGACTACGCCTTCGAGTGCGAGGTCTGCGGGAAGAAGTACAAGATCAAGGGCGACCTCACCAATCACATAAGATTCCAGCACAGAGAGCAGCCGATCATGTGCGACGTGTGCGGCAAGACCTGCGGCAACAGTAACTCGCTGTACGTGCACCAGAAGTTCGCCCACTACAAGGCCGAGTTCGAGTGCCCGATATGCCACAGGCGCATGGTCAGCCAGGCGAACCTCGACGAGCACGTGCTCAAGCAGCACGAGCAGCGCGAGGACGCCGTCTGCGAGGAGTGCGGCAAGAGGTTCACGCGCACCAGCCGGCTCAAGATACACATGCGCATACACACCGGTCTCAAGCCACACGCCTGCAGAATCTGCGGCAAGGCATTCGCGCGCAAGACAGCGTTGAGGCAACACCTGCTGATTCACACGGGACAGCGGCCGTACGTCTGCGACATCTGCGGCAAGGCCTTCACGCAGAAGCCGGGACTGATCAGTCATAGGAAGAGCCATCCGGGTGATCATCCGCCGTTGCCCAGGGTCACCATTGATCATGTGCTGTCCGAGTTTCTGGACGAGGGACAGGAGgaCCTGTCTATGGCGCAGGCATCACACGCAGTACATATAGTGGTTTGTGTAGTCGTGATTGAGCAATATTGTGTTATCGCGGTATATTCGCGGAATGTTTGCCCCGGCGGTAATGTCCGGTACCTCAAGAGGCGAAAAATCGACACCGCTGCAAAGTCTACTACGCCTACCGACAAGACGACGACAACCAAgagcgagcagcagcagcgtcgcTTCGTCATCGAGCGCAAGCTCGTGAAGATTCCACCGCGGCCGCTGAAGGTCGTAGGCTCGTCGAGCATGACGATAACGCGCACGATGGCCGCGCTGCCGCAACCAATCGATGAAGTGATAGAGGTGAAGGACGAGCCCGAGGAGGCTGACGACTTCGAGGAGGTCTTCATCGATGGCACCGAAACAGGCGCCGGTAGCAGTAGTGCCGCGAGCATCAAGAGTACTAGTCCGATGTCGAAGAAGAAAACAACGACGACGACAGCGGCGGCGAGTTCCAGTGACGAGGTCGTTGTGTACATGTGCAAGGCCTGCAAGATGTACTTCCCCATGAGGCGGATGCTCGAGATTCACAACTCCACGGTGCACAACCTGGTACAGAAGACTCGAGCGTCACCAGCGAAGGTGCAGCGGTCTTACAGAATGAACAAAAACCGATCGTTCCAGTGCAATCACTGCACATTCAGCACACAAGGTTTGCCCGCAATGAATATACACGTGATGCGCAAGCATCCTAATGCGATGGCCAAAACAGTGAGCCGACCGAAGATGGTGGTGGCACCTGCAAACGAGCCGAAGCTCGAAGAGCCCGACGAGGACGACGAATCGTCCTGGCCGATGGAGGTGATCGAGGACGAGGATAGTTTGATGTGTCATCCGTCCCCGCACAAGAAAGCCAAGATTGAGGTAGTAGAGAAAGAGGCGGAGGAGAAAGAAACCAGCGAAGAGTCAACACGGTGTTGCTACTGTCCGTTCCAGGGCTACACGCGTAGCGAGCTCGAGTGTCACATAAAGCGCAAACATCGCAACAAGTGGCTCGTCACCATCGCGAAAAAGGTCGCCGCCCTGACCAAAAAGACGACGCCCTCCAAAGAGCCGTCGGACGTCGTTGAGATCACCTGCCCGCGCTGTCCCTACACCGCCGGCACGCGCTCGACCATGAATCAGCACCTGATGCGCGAGCATAACAGCTGCATTGCAGAAGAACCGGAGGACGTTGCCGTCGACAAAAAGGAGAAAGAGGAGAAACGGAAAGAGGACGATGACGACGGCGAGGAGATCGTCGAGGAGGACATAACGAAAGTCGTCGACGAGGTGGACATGTTCGAGGATGTGGAGTTGGACGACGTCGGCAACCAGGAGGTGGAGAGAGCACCGGTAAAACCGCGTGCTTATCAAAAGTGTCCCCACTGTCCATTCCGCGCGTTCGCGTCAGCCACCCTCAAAACGCACCTCAATAGGCGTCACTCCACAGATCCCCTCTGTGCGATCGAGGGTGAAGTCGATGACCAGTCGCTCCAGAAGCGCGTCGTCAGCAAAGGCAATCACCGCAGGCTGGCGAGCACGATGCCGGTGACTGCGTACGCCTGCCACTACTGCAGCTTCGCCGCCGCCACGGTGGGCAGCATCAACTCGCACTCGGCGCGACTGCACTCGGGCCAGCATCAGCCGCTCCTCGAGATACCCGTCGAAGAGTTCGACTGCGACCAGTGCGACGTGAAGACTCGCTGCCGCAAGACCATGCAGAGCCACTTGAAGCGCTGCCATCTGGCCCAGGCGAATTCGGACGGCATGTTCGTCTGCACCGTCTGCTCGTACGAGACGCTGTCGAGGATGGGCCTGCAACGGCACATCTCCATGAAGCACAACAAGGCTAGGTGCGATCCTGCTACCAACAGCTACAAGTGCGAGCACTGCGACTTCGCGTCGCCCAACGCCAAGATAATGGACTGGCACAAGTACCTGCACGCCGAGGAGCCGATGCCCGGTAGCAACGGGAGTTTCTACTCGTGCAACGATTGCGAGTTCTCCACCTGGACCAAGACTCAGCTGTTCTCGCATATCAAGCGCAAGCACAAGGATGGCGATGACGAGGAGCAGATCGAGCACCTGTTCGTCTGCCAGCAGTGCGAGTACACGTCCAAGAACAAACACTCGATGAAGGTCCACGTGATCAGGAAGCACACCAGCGAGTTCAATCACGAGTGCGGGACCTGCGGCAAGAAGTACAAGGTCAAGGCCGATCTCACTAACCACATCAGGTTCCAGCACAGGGAGCAGCCCATCATATGCGACGTGTGCGGCAAGACCTGCAGGAACAGTAACCTGCTCTATCTGCACCAGAAGTTCGCGCATTACAAGCCGGAATTCGAGTGTCCGATATGCCACAGGCGCATGGTCAGCCAGGCTAACCTCGACGAGCATATACTGAAGCAGCACGAGCAGCTGCAGGATGTCGTGTGCGACGAGTGCGGCAAGACTTTCAAGAAAGTCGCTCGGCTCAAGATCCACAAGCGCACACACACTGGCGTCAAGCCGTATACCTGCAAGATATGCCTTCGGGCGTTCGCGCGCAGGAACGGATTGAGGCAACATCTGTTGATTCATACGGGACAGAGGCCCTATTTGTGCGACATATGTGGTAAGAGCTTCACGCAGAAGACAGGCTTGATCAGTCATAGAAAGAGCCACCCGGGTAGTCATCCGCCCTTGCCGAGGGTCACAATAGATCACGTGCTGTCGGATTTGTTGAATGAAGAATGA
- Protein Sequence
- MGMAFTGLRYPDESADFETIGDIPTKTSTAAATRTPVASAKPSSSSMTLYQISYVDGKPSYSLVPIKKKAETPPSKGCNEYVCHECGLKFTTESRLKWHCATHSPLKNRKQQSKIKPIVKEPPPRNEVVKVMSESNNRVLAKKVRRRNPPKSVAKPTRLEKPRKTGQMNDKGLTFICPSCEFSTNDRSVMINHFTSTHCFKTELKVEPKSEEQILSDEGAIFEVYEDASHHQDIGAEEEVVEMQEVYADEATIEQLQCAECGFTGYTQDDIDFHTCAQATGEQLFSCPLCTYECLTRMGLQSHITRKHKPKPAEGMPRTYDCDCCDFKCNNKNTLYSHRRKHRNGEEITDEKNFFCNDCEFGARTKSALYLHIKRRHKVDDGPGDPKPTRPDMYKCEHCDYTNKNRYEMKVHVIRKHTNDYAFECEVCGKKYKIKGDLTNHIRFQHREQPIMCDVCGKTCGNSNSLYVHQKFAHYKAEFECPICHRRMVSQANLDEHVLKQHEQREDAVCEECGKRFTRTSRLKIHMRIHTGLKPHACRICGKAFARKTALRQHLLIHTGQRPYVCDICGKAFTQKPGLISHRKSHPGDHPPLPRVTIDHVLSEFLDEGQEDLSMAQASHAVHIVVCVVVIEQYCVIAVYSRNVCPGGNVRYLKRRKIDTAAKSTTPTDKTTTTKSEQQQRRFVIERKLVKIPPRPLKVVGSSSMTITRTMAALPQPIDEVIEVKDEPEEADDFEEVFIDGTETGAGSSSAASIKSTSPMSKKKTTTTTAAASSSDEVVVYMCKACKMYFPMRRMLEIHNSTVHNLVQKTRASPAKVQRSYRMNKNRSFQCNHCTFSTQGLPAMNIHVMRKHPNAMAKTVSRPKMVVAPANEPKLEEPDEDDESSWPMEVIEDEDSLMCHPSPHKKAKIEVVEKEAEEKETSEESTRCCYCPFQGYTRSELECHIKRKHRNKWLVTIAKKVAALTKKTTPSKEPSDVVEITCPRCPYTAGTRSTMNQHLMREHNSCIAEEPEDVAVDKKEKEEKRKEDDDDGEEIVEEDITKVVDEVDMFEDVELDDVGNQEVERAPVKPRAYQKCPHCPFRAFASATLKTHLNRRHSTDPLCAIEGEVDDQSLQKRVVSKGNHRRLASTMPVTAYACHYCSFAAATVGSINSHSARLHSGQHQPLLEIPVEEFDCDQCDVKTRCRKTMQSHLKRCHLAQANSDGMFVCTVCSYETLSRMGLQRHISMKHNKARCDPATNSYKCEHCDFASPNAKIMDWHKYLHAEEPMPGSNGSFYSCNDCEFSTWTKTQLFSHIKRKHKDGDDEEQIEHLFVCQQCEYTSKNKHSMKVHVIRKHTSEFNHECGTCGKKYKVKADLTNHIRFQHREQPIICDVCGKTCRNSNLLYLHQKFAHYKPEFECPICHRRMVSQANLDEHILKQHEQLQDVVCDECGKTFKKVARLKIHKRTHTGVKPYTCKICLRAFARRNGLRQHLLIHTGQRPYLCDICGKSFTQKTGLISHRKSHPGSHPPLPRVTIDHVLSDLLNEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -