Basic Information

Insect: Torymus aiolomorphi
Gene Symbol: -
Assembly: GCA_036365515.1
Location: CM070873.1:245038728-245041839[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0046 2.2 11.6 0.9 1 23 269 291 269 291 0.95

2 12 7.4e-05 0.035 17.3 2.0 1 23 299 321 299 321 0.98

3 12 2.5e-05 0.012 18.7 0.6 2 23 329 350 328 350 0.97

4 12 0.00052 0.25 14.6 1.8 1 23 356 378 356 378 0.98

5 12 1.3e-05 0.0064 19.6 2.4 1 23 385 407 385 407 0.99

6 12 1.8e-05 0.0086 19.2 1.2 1 23 413 435 413 435 0.95

7 12 1.3e-05 0.0062 19.6 0.1 1 23 441 463 441 463 0.98

8 12 7.3e-07 0.00035 23.6 1.2 1 23 469 492 469 492 0.96

9 12 5.6e-06 0.0027 20.8 0.5 1 23 498 521 498 521 0.96

10 12 9.4e-06 0.0045 20.1 2.5 1 23 527 549 527 549 0.99

11 12 9.4e-05 0.045 16.9 0.4 1 23 555 577 555 577 0.94

12 12 0.00038 0.18 15.0 0.2 1 23 583 607 583 607 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0046	2.2	11.6	0.9	1	23	269	291	269	291	0.95
2	12	7.4e-05	0.035	17.3	2.0	1	23	299	321	299	321	0.98
3	12	2.5e-05	0.012	18.7	0.6	2	23	329	350	328	350	0.97
4	12	0.00052	0.25	14.6	1.8	1	23	356	378	356	378	0.98
5	12	1.3e-05	0.0064	19.6	2.4	1	23	385	407	385	407	0.99
6	12	1.8e-05	0.0086	19.2	1.2	1	23	413	435	413	435	0.95
7	12	1.3e-05	0.0062	19.6	0.1	1	23	441	463	441	463	0.98
8	12	7.3e-07	0.00035	23.6	1.2	1	23	469	492	469	492	0.96
9	12	5.6e-06	0.0027	20.8	0.5	1	23	498	521	498	521	0.96
10	12	9.4e-06	0.0045	20.1	2.5	1	23	527	549	527	549	0.99
11	12	9.4e-05	0.045	16.9	0.4	1	23	555	577	555	577	0.94
12	12	0.00038	0.18	15.0	0.2	1	23	583	607	583	607	0.94

Sequence Information

Coding Sequence: ATGACAGCAGACACAGAAAAGGGTACCCATTGCCTGCTTTGCAACAGCAAAGTAGGTCTATCGACCAGAAACAGTGTTAGTGTTTTAGGAGATAATGCAATAACGACTACCGATAAACCCATACTTACTGTTCTTAGTCTTGTTTTGCAAAAAGTTGTAAACCAAGGCAATCTCCACTCATCTGTAGTTTGTAAAAAATGTCATAAACTTATTAATGagGCTGATGAATTAGAAACAAAATTATCAGAAGTTAGATCAGAAATCTGTAATCTATATAAGAAGACTAGCACAAAATTCTCTGAAACAGATATAAATGGAGAAGAATACAATGATCATGATTATATTgataatgaaaatattgaaaGAGTAATAGTTACAAAGTCAGAAAAAGTCAAGGAAACTAAGAGAAGAGTTAAAAAAGCAACTGTTTTAGAAGCACCAATCGAAATACAACCTGCAGAATTAATTCTTGGAGACAAAATTCAAGAAGATGAAAATGTGGAAATTATAACAGAATTCGAAGAAGCAGAAGATCAATATGACAATTCTATGGATAATGATAATATCCAAGATAATAACGAAGATACAAGTTCTCCTGAAACTGAATCACAAATGGAAGAAGtaattatagaaaaaaagaatcttaataaaaaacaGAAAGTGACAAAAGGCGAATCTCCAGAAGAaTTTGCTGTGAGAGATGGTGAAAACTACATATGTGCTCTCTGTCCTGATCAAATTAAAGAAGCAAGGAATGCTAGAGGTATTATTGCCCATTTAAAAGATGAACATGAAACTAGATTATACATTTGTGACATCTGCGGTGATCAATTTAGAAAAAGAACTGAACTATCACATCATTTGGATGATCATGTTGCAAAAGAAGCAGGTGATTTCCAATGTGAAACATGCAATAGGATATTTACTAATTTACGATTGTTTCGCATCCATAAGCGTATTCATAATCCTCAAGTTAAATCTTGGACATGTGAAACTTGCGGTAAACAATATAGCTCAAAAAATTTACTTGAAGAACATACCAATACTCACACTGGTAATCGACCTTATATTTGTGAAGTATGTGGTAAAGACTTTGCTTCAAAGTATACTCATCGAGCTCACACAAAAACTCATGAAGTAAGAGCTAGACCTTACGAATGTACTCAATGTAATAAAAGTTTTCTTAGCCAGCAAAATTTGACTCAACACCTTAAAACACATAATGGTGTGAAAGAATTTATTTGTCATCAGTGTGggAAAGCATTTGGTTCTTCACATAATCTTGAAGTACACAATATTGTTCATACTGGGTATAAGCCATATATTTGCCGCGTCTGTGGTAAAGCATTTGCACGAAAAGCCGAAATTCGCGATCACGAAAGAACGCATACTGGTGAAAAACCTTATCAATGTGAATTTTGTGGAGCAACTTTCAGCCAACGATCTAATTTACAGTCACATAAACGGGCGACACACTACAATGACAAGAGATACAAATGTGACGAATGTGGCAAAGGTTTTAAGAGAAGAAGATTGTTGGATTACCATATTAAAGCTGCTCACACTGGAGAACGTCCGTATAAATGTGGCACATGCACAGCAACTTTTGTTTATCCTGAACACTTTAAAAAGCACATGCGCATTCACACTGGAGAAAAACCTTATTTATGCGAGGTTTGTGGTAAAGCCTTCAATAGCAGAGACAATCGGAATGCCCATAGATTTATTCACAGTGATAAAAAGCCTTATGAATGCTTAGTTTGTGGAATGGGTTTCATGCGAAAACCACTGCTTTATACACACATGCAAACTCAAggTCATTTGAATGACACTATTGTTGTAAATCAACCAAGACTGACAACTGAGGATGACGTGATTATTCAAGATAATAGAGTTCATATAGTTATGGATGGTGAACCAGATCAaatcGACGAAAATACACAACTTATTGTTGCGAATCTTAAAGACCACGTAATTATACAAGATGGAGACAAACAAAATGTAATAAGCATTGAAGATGATATTGCGAGCGAAAACATGAATCAACTTGTTGATGGAGAGATGAGCTTCGAAGAAGCCGAAGTACTGGAGTGTAAAACGGAGGAGGAAGACGTAGTTGAAGAGGTATATGGCTACCAAGACGAAGAAGGTAATACCATAGTCCTACCACCCGGCACCGAcatcaaggaaatcattggagAGGGTAACAAGACGATGCGACTAGTGCAGATCAGCTTACCGACTGACGGCAGCGGCGACGGCAGAAGTTGGCTGAGCTTAGTACAAAATTCTTAA
Protein Sequence: MTADTEKGTHCLLCNSKVGLSTRNSVSVLGDNAITTTDKPILTVLSLVLQKVVNQGNLHSSVVCKKCHKLINEADELETKLSEVRSEICNLYKKTSTKFSETDINGEEYNDHDYIDNENIERVIVTKSEKVKETKRRVKKATVLEAPIEIQPAELILGDKIQEDENVEIITEFEEAEDQYDNSMDNDNIQDNNEDTSSPETESQMEEVIIEKKNLNKKQKVTKGESPEEFAVRDGENYICALCPDQIKEARNARGIIAHLKDEHETRLYICDICGDQFRKRTELSHHLDDHVAKEAGDFQCETCNRIFTNLRLFRIHKRIHNPQVKSWTCETCGKQYSSKNLLEEHTNTHTGNRPYICEVCGKDFASKYTHRAHTKTHEVRARPYECTQCNKSFLSQQNLTQHLKTHNGVKEFICHQCGKAFGSSHNLEVHNIVHTGYKPYICRVCGKAFARKAEIRDHERTHTGEKPYQCEFCGATFSQRSNLQSHKRATHYNDKRYKCDECGKGFKRRRLLDYHIKAAHTGERPYKCGTCTATFVYPEHFKKHMRIHTGEKPYLCEVCGKAFNSRDNRNAHRFIHSDKKPYECLVCGMGFMRKPLLYTHMQTQGHLNDTIVVNQPRLTTEDDVIIQDNRVHIVMDGEPDQIDENTQLIVANLKDHVIIQDGDKQNVISIEDDIASENMNQLVDGEMSFEEAEVLECKTEEEDVVEEVYGYQDEEGNTIVLPPGTDIKEIIGEGNKTMRLVQISLPTDGSGDGRSWLSLVQNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01467381;
90% Identity: iTF_01466511; iTF_01468244; iTF_01467381;
80% Identity: -