Taio060407.1
Basic Information
- Insect
- Torymus aiolomorphi
- Gene Symbol
- ZBTB41
- Assembly
- GCA_036365515.1
- Location
- CM070875.1:26432890-26435845[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.011 5.1 10.5 0.2 1 23 58 80 58 80 0.94 2 21 1.2e-05 0.0057 19.8 4.4 1 23 86 108 86 108 0.97 3 21 2.8e-07 0.00014 24.9 0.1 1 23 114 136 114 136 0.98 4 21 0.00042 0.2 14.9 1.3 3 23 144 165 143 165 0.96 5 21 3.6e-05 0.017 18.2 3.5 1 23 170 192 170 192 0.97 6 21 2.3e-05 0.011 18.9 1.9 1 23 201 223 201 223 0.98 7 21 1.2e-05 0.0055 19.8 0.5 1 23 229 251 229 251 0.97 8 21 5.5e-05 0.026 17.7 1.4 2 23 258 279 257 279 0.97 9 21 5.6e-06 0.0027 20.8 1.4 1 23 285 307 285 307 0.98 10 21 0.058 28 8.2 0.4 1 23 403 426 403 426 0.93 11 21 0.00013 0.064 16.5 3.7 1 23 435 457 435 457 0.97 12 21 1.4e-06 0.00065 22.7 7.1 1 23 483 505 483 505 0.98 13 21 0.0003 0.14 15.3 3.7 3 23 512 532 510 532 0.97 14 21 0.00036 0.17 15.1 0.2 1 23 537 559 537 559 0.98 15 21 1.3e-06 0.00062 22.8 0.7 1 23 567 589 567 589 0.98 16 21 0.34 1.6e+02 5.7 1.7 1 23 595 618 595 618 0.94 17 21 0.00025 0.12 15.6 0.3 3 23 631 651 629 651 0.96 18 21 7.2e-06 0.0035 20.4 2.0 1 23 657 679 657 679 0.96 19 21 3.7e-08 1.8e-05 27.6 0.2 1 23 685 707 685 707 0.98 20 21 2.9e-07 0.00014 24.8 0.9 1 23 713 735 713 735 0.98 21 21 0.00065 0.31 14.3 1.7 1 21 741 761 741 762 0.96
Sequence Information
- Coding Sequence
- ATGGAGAAAAAAAATCTTGGCTTTCCTTCTAAATCTATAGGTATTGGTTTCTTCACATGCTCCGGGAGTTCAACAAAATCGGAAAGCACACTAGGAACCACACCTAAAATAAGCTCAACCGCAATCAATAACCAACGAGAGAACCCCGAATCGAGCAACCAAGATGGTACCTACCAATGCCCGCTTTGTCCCCGGCGTCTGCGCACGAAGAACCTGTTCGACGGCCATCTGATAGCCCACAGTGACGCGCGACCTCACAGCTGCGACGTCTGTCACAAGAGCTTCAAGCGCAGCAACACTCTCGCAGTGCACCGTCGCATCCACAGCTCGCAACGTAACTTCATCTGCGATGTATGCGGCCGTGCCTTCGTGCAGGCTTCCCAGCTCGCCACGCACCAGCGACGGCACTTCGAGAAGTACACGAGGCACTGCGACTTGTGCAACAAAGGCTTTTTCACGAACGCGGAGCTGAGAGGACACATGAACGTGAGGCACGGCGCGAAGGAGCACGTGTGCAAGGACTGCGGCAGGAGCTTTCCTAACAATCACTCACTGCGGGGCCACAGCAAGAGCCACGAGCCGGATTTCGAGCCGACGAAGCACCAATGCGAATTCTGCGGCAAGACCTTTGCCTTCAAGAACTCCCTGGTGGTGCACGTGAAGAGCCACACGGGCGAGAACAAATACGACTGTCACTTGTGCGGCAAGTCCGTTGCGTCGAGAGGCTCGCTGCAGGACCATCTGAGGCTGCACAACAGTGAGAAGAACCTCGTGTGCGATTTGTGCGGCAAGGCGTTTCACAAGAGAACGACGCTCGTGGTGCACAGAAGGACGCACACGGGAGAGAAACCGTACGTTTGCGAGACGTGCGGAAAGGCGTTCACGCAGCACTCGACGTTGGTGATTCACAGCCGGTATCATACAGGACAAAGACCGTATCAATTCGCCTACCCCGAGCGCTATTATCCGCTGACGGTCTTCGGCAACAAGGATACCAACGGCGAGGTGGTAGTGATGAACTCAGACTCCTCTTCGCCCGTGATGTTCACGAAGAAGAAGCAACAGATGCGCAAGCTCGAGAGTATCACGTGTATCGAAGAGCAACACCCCATCGTTGTCGTTAAAGTTGAGGAATCACATGCTACTAACTACGACGACaacgaagaggaggaggaggaagaggaggaggaggacttACCACTGGCCTACTACTGCAAACCCTGCGGCATGTTCTTCGGGTCGCAGAATCTACTCAACGAACACTCCGTGACGCAACATAAGGTTGCTGCGATGAAGAAGAAGTTTGATTGCGCGCACTGCGGCAAGGTGTGTCGAACGGCTCTGAGCCTACGCCAGCACTTGAAACGCCACAAAGACGCCGCCAGTCTGAAGAAAGAGgacgaagaggaggaggaagaggagggtGATGAGAAACAGGAACAGGAGCACACGTGCAACACGTGCGGCAAGGTTTTCAGACACAAGAGCAACTACCAGAAGCACTTGATGCGCCACACAGTGGGCGACCTCGCGTGCAAGCACTGCCCCAAGAAGTTCAGACTGTTCAGGGACCTAACGAGGCACGAGAAGACGCACTTTCTGCCGAGCTACACGTGCAAAGAGTGCGACTACGAGACGACGGTACTAGCTGCCCTCACGATTCACATGACCAGGCACACGGATAAGGCTGAGCTACCGTTCAAGTGCAGCGAGTGCGACAAGAGATTCAGAAAGGCCGCCGAGCTCCAGGAACACTACAACATACATTCCGGCGATAAGCCGTTCGTCTGTCAAGTGTGCTCAGCAGCGTTCTTCCTGAGGCGGCAATTGTCCGCGCACTGCAGGAGGCTACATCCCGAGCTGAAGGCGCAGAAGGTCACCAGCACTGCGTGCGACATCTGCGGCCGTGTTCTCGCCACGAAGCGCTCGCTGTTTCGGCACAAGGAGAGCCACAATCCGACCAAACTCTACCTCTGCGACTTTTGCGGCAAGAGCCTCAGCAGCGCGGAACATCTGAAGAAACACAGGAGGATACATACAGGCGAGAAACCCTACGTCTGCGATATATGCGGCAAGGGATTCACCGACTCGGAAAATCTCAGGATGCACCGGCGCGTGCACACCGGTGAGAAGCCGTACAAGTGCGATCAGTGCCCGAAAGCCTTCAGCCAGAGGTCGACTCTGACGATACACAGGAGGGGACACACGGGGGAGAGGCCGTATGTGTGTCAGATATGCCATCGTGGATTCTCGTGCCAGGGAAATCTGACCGCACATCAGAAGTCCACGTGTGTCTGA
- Protein Sequence
- MEKKNLGFPSKSIGIGFFTCSGSSTKSESTLGTTPKISSTAINNQRENPESSNQDGTYQCPLCPRRLRTKNLFDGHLIAHSDARPHSCDVCHKSFKRSNTLAVHRRIHSSQRNFICDVCGRAFVQASQLATHQRRHFEKYTRHCDLCNKGFFTNAELRGHMNVRHGAKEHVCKDCGRSFPNNHSLRGHSKSHEPDFEPTKHQCEFCGKTFAFKNSLVVHVKSHTGENKYDCHLCGKSVASRGSLQDHLRLHNSEKNLVCDLCGKAFHKRTTLVVHRRTHTGEKPYVCETCGKAFTQHSTLVIHSRYHTGQRPYQFAYPERYYPLTVFGNKDTNGEVVVMNSDSSSPVMFTKKKQQMRKLESITCIEEQHPIVVVKVEESHATNYDDNEEEEEEEEEEDLPLAYYCKPCGMFFGSQNLLNEHSVTQHKVAAMKKKFDCAHCGKVCRTALSLRQHLKRHKDAASLKKEDEEEEEEEGDEKQEQEHTCNTCGKVFRHKSNYQKHLMRHTVGDLACKHCPKKFRLFRDLTRHEKTHFLPSYTCKECDYETTVLAALTIHMTRHTDKAELPFKCSECDKRFRKAAELQEHYNIHSGDKPFVCQVCSAAFFLRRQLSAHCRRLHPELKAQKVTSTACDICGRVLATKRSLFRHKESHNPTKLYLCDFCGKSLSSAEHLKKHRRIHTGEKPYVCDICGKGFTDSENLRMHRRVHTGEKPYKCDQCPKAFSQRSTLTIHRRGHTGERPYVCQICHRGFSCQGNLTAHQKSTCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01466503;
- 90% Identity
- -
- 80% Identity
- -