Basic Information

Gene Symbol
ncor1
Assembly
GCA_036365515.1
Location
CM070875.1:28139713-28155126[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-09 1.1e-05 28.1 0.0 3 43 785 825 784 828 0.96

Sequence Information

Coding Sequence
ATGGGTCGAGAGCAGAGAAGAGAGGAcgagatGCCCCAGCAGAGCTACGGTTCGAGCTCACGTCAAGCGGTGTCTCCGCGGACGGTCGAGGGTAGCGGTGTCGGGGGCGGCGGAGGCGGCGGGGGCGGaggcggcggtggcggtggtgCTGCTGCGGCAGGTGGCGTCGGCGGCAGCGGTGGCAGCGGCGGGGGCGCTGGCGCCGGCCCCGGCAGCGGCGCAGGGCCGGCAGCGGCGCGCTACCCCCAGCAGCACCATCACCTCCAGCaccagcaacaacaacaacagcaccagcaacaacaacaacagcaccagcagcagcaagtGCAAAGTCAACAACAGCAGCCGCCACTGCCGCAAGTCGCGGCTGGGGTCCATCCCCACTTCTATCCGTATCCCCTGCCGCCGCATCTGCAGCACTTTCAGCATCACCATCAGCAGATTAtcgccgcagcagcagcagcagccgccgccgccgccggcaCCTCACCATCGCCGGGATCGTTGGCGATGAACAGTGGCCCGGCTGGCGGCTCTGGCCAGCCACCAGCGGGattacagcagcagcagcagcaaccgaACGTCGCTACAGTACAGTCCGCCCGCGATCAGCACACGCAAGAAGCCAACGTGAGCGGTGTGAACATCATAATGAACATCACGGTGCCACCGGTGCCGGTGCCGCCAGGCCTGCGCTTCGTCCACCCGTACctgccgccgccaccgcccCATCCTCATCCGCCCCCGGCTGTCTCGGTGGCCCAGGTGGCGCAGGTCGCCTCGTCCAACTCGGCCTCGCCCGTCTCGGCGAGCTCCGGGCCCACTTCCATCGTGCAGCAGCAGGTTAgccggcagcagcagcatccgCCCTCGGCACCGTCGCCTGCCTCGAACGCCGCCGCGGCTTACACGAGGGATGTCTATCGCAATGCCAGTCCTAATATAAACGAGCGGGTGGCGATAAGCGTGAGCAGTAGTCCCGTTAACTCGCAGCAGGTTGTCGGCGTTGGTGAGTACGTGGTGAGCGGCGGACGTGGCGGTGGTGATCGACCGCGGATATCCCTACTGCCGGCACCGGCGTCGATACCACCTGCGGCCTCACCCACCGCGCCTACGGACTACCACGCCGCGGCGGCGGCACGCAACAATCGCGTCACCGCCGCCGGTGTCCTGGCCCAGATCCAGGATTACCGGCCCAGCCCAGTCGACATGGCCCagatgcagcaacagcagcatcaAGAGGCACCGCCCTTCAAGAAGATCCGGTTAGGTCCTACGCTTCAACAACTGGTGCCgacgcagcagcagcaacagcagcagcagcaacagcaacagcagtCGATAACGCAAACGGATAGTCAGAGGATCGTCAGCGGGCAGGACGTAATGGTCAAGTCGAAGGCCGTGCAGCAGCTGCCGCCGTTGAGGATAGACACGAGGCCGCCAGCGGGTGCTTACACACCACAGACGGAAGCGATCTCTCCGACTCTGCCAGAGCCTAACATGCAAGAGGATGCGGCATTGAGGAGCACCAAAGACGATCTCCTACAGCAGATTGCGAAAGTTGACCGGGAAATTGCGAAAAGAGAGACTACGATAACCAAACTTGGAAAAAAGCTTAAAGAGCTGGAAGAAGTAGCCAGTCAACCCTTGGAAGCACCCGGCACTAAGCGACCTGCCGAAGAATCATCTCAGCAGCCCAAGCATCAGTCTCTTGTACAGAAAATTTATGCCGAGAATAGGAAAAGAGCGGAGGAGGCGCACAGGTTGTTGGAGAAACTAGGCCCGAAGGTGAAACTGCCACTCTACAATCAACCCTCGGACACGAGCGTGTACCAGGAGAACCGGGCTAGGCACCAGTGCATGAAAGCCCGCTTGGTAGAGAGACTGCGCAAGGAGCACGCGGAACGTGCCACGCTGCACCAGCAGCAGTCGCAGACGTACGCTATACTTGTGCAAGAGTGGCATCGCAAAGTTGAGAAGCTGGAGGCAACGCAAAAGCGCAAGACGAAGGAAGCGAAAAATCGCGAGTTCTTTGAAAAAGTCTTCCCGGAGCTGCGCAAGCAGCGTGAGGACAAGGAGCGCTTCAACAGGGTCGGCGCGCGTATTAAGAGTGAGGCCGATCTTGAGGAGATTATGGATGGTCTGCAGGAGCAGGAGGAAGAGTTGTCGGCCGAGTTAAAAAATGCGTTGAAAGAGCGTCAGATGGAGGACAAGAAGATGCGCTCGTACGCGGTGATACCACCTCTGCTGCTGGACGCAAAGCAGCGGAAAATCGCATTTCAGAATCGAAACGGTCTGCTGCAGCCTGAGGAGCTCGAGGCACTCCACAGCGAGAGAAAGCTGATCAACGTATGGAGCGCAACGGAGCACGAGATATTCAAGGAGAAGTATCTCCAGCATCCCAAGAACTTCGGCGCGATAGCCTCCTCGTTCGACTCCAAGTCTGCGGCGGACTGCGTGCATCACTACTACCTCACTAAAAAAGCGGAGAATTATAAGCAGCTACTGCGAAAATCGAGGCGTACGCGTAGTTCTCGAAATAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTAACGACGGGAGTGACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAGGAGAATCCCCACAGTGGTTCGGTGGCGTCCGGTAATAGTAACAGTAACAACACAAGCACGACGACATCGGCACCGTCGACGACTGTGTCTTCGTCCTTATCGACGACGATGGTGACGAGCGTGAGCACTGTCGCCGCCTCCTCGTCCTCCACGTCGTCGTTGACGACGGCGACTTCCTCGTCAAACTCGGCCGCTACCGCTGCGATAGCGATCGCGCCGAGCAGTAGCAGTGGCGCGGTGAGCGCGACCTCGGAGTCCTCGACAACGACGActgcggcgacgacgacgatcaTGTCGACGGCCGCCTCGGCAGCAGCGGCGTCAGCAGCATCCGTCCCGAGTACCAGCGCGACGACTACAACGTCGAGCGTACTCACGACGACGTCCACGTCGTCGGCCAGCGCCAAGGACGCCCGCGAGGCCAACAAGGAGAACAAGGAGATCAAGCAGGAGATCAAACAGGAGCCCAAGGACTCAATCCTATTCAAGGATATCAAGGAGGAGTCGCAATCGAGTTCGGAGACGCTTTCCAGCAGGGAAATCAAGATCGAGGGCAAGGGCGCCCTGTCCTCTTCGTCGAACACGAGCAGCACAACGAACGCTATCAGCGCAGTTGCCGGcttacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcatcATCTCGAGCaacaaaaagataaaaagaaaggCGCGGGTTTGGGTGGAGTGAGTGCCACGAGCAGGTCGAAGGACAAGAAGAAGGAGAACCACGCGACGCCCATGGAGACCAGCGACGAGGAGACACAAGGTAAGTGTCAACAGTTGATTTAA
Protein Sequence
MGREQRREDEMPQQSYGSSSRQAVSPRTVEGSGVGGGGGGGGGGGGGGGAAAAGGVGGSGGSGGGAGAGPGSGAGPAAARYPQQHHHLQHQQQQQQHQQQQQQHQQQQVQSQQQQPPLPQVAAGVHPHFYPYPLPPHLQHFQHHHQQIIAAAAAAAAAAAGTSPSPGSLAMNSGPAGGSGQPPAGLQQQQQQPNVATVQSARDQHTQEANVSGVNIIMNITVPPVPVPPGLRFVHPYLPPPPPHPHPPPAVSVAQVAQVASSNSASPVSASSGPTSIVQQQVSRQQQHPPSAPSPASNAAAAYTRDVYRNASPNINERVAISVSSSPVNSQQVVGVGEYVVSGGRGGGDRPRISLLPAPASIPPAASPTAPTDYHAAAAARNNRVTAAGVLAQIQDYRPSPVDMAQMQQQQHQEAPPFKKIRLGPTLQQLVPTQQQQQQQQQQQQQSITQTDSQRIVSGQDVMVKSKAVQQLPPLRIDTRPPAGAYTPQTEAISPTLPEPNMQEDAALRSTKDDLLQQIAKVDREIAKRETTITKLGKKLKELEEVASQPLEAPGTKRPAEESSQQPKHQSLVQKIYAENRKRAEEAHRLLEKLGPKVKLPLYNQPSDTSVYQENRARHQCMKARLVERLRKEHAERATLHQQQSQTYAILVQEWHRKVEKLEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSAELKNALKERQMEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELEALHSERKLINVWSATEHEIFKEKYLQHPKNFGAIASSFDSKSAADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPHSGSVASGNSNSNNTSTTTSAPSTTVSSSLSTTMVTSVSTVAASSSSTSSLTTATSSSNSAATAAIAIAPSSSSGAVSATSESSTTTTAATTTIMSTAASAAAASAASVPSTSATTTTSSVLTTTSTSSASAKDAREANKENKEIKQEIKQEPKDSILFKDIKEESQSSSETLSSREIKIEGKGALSSSSNTSSTTNAISAVAGLQQQQQQQQQQQQQQQHHLEQQKDKKKGAGLGGVSATSRSKDKKKENHATPMETSDEETQGKCQQLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01469612; iTF_01468787;
90% Identity
iTF_01469612;
80% Identity
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