Basic Information

Gene Symbol
cdc5l
Assembly
GCA_036365515.1
Location
CM070873.1:238896546-238897692[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-13 8.2e-10 41.4 1.0 2 46 13 58 12 58 0.97

Sequence Information

Coding Sequence
ATGCCGCGCGTTATTAACGGCGGCGCCAGGAAAGCCGGTTACTGGCGCGACAGTGAGGATAAGATCCTCAAGCAGGCTGTGCTGTACTACGGCCGTAATCAGTGGAGTCTTGTgtccaaatttttaataagaaagGACGCCGAACAATGTCGCGCGAGATGGTTTCAATGGCTCGAACCACAACAGAAAGCGGAAAAAAATGGATTCTCTGTTAATCACAAAGAGGAAGAGATCGATTATGCATCGACGACACCTGAGACTAGACCGGCCAGACCAGACACACCGATCGATAAAAATGAGATCATAAAGAGATTTGTTGAAGAGGACCGGAAAAGAGCGGACAGAGAAAATGCACAGAAAGAGGGATCTGTCAGGACTGTCGAAGTCATGctgaagaaaagaagaaaactaAACAATGACATCACGCCTATTACACcactcgtCGCTGTCCCGGGCGCCGCCGGCATCCTCGATCTCGACTCCTGCTGA
Protein Sequence
MPRVINGGARKAGYWRDSEDKILKQAVLYYGRNQWSLVSKFLIRKDAEQCRARWFQWLEPQQKAEKNGFSVNHKEEEIDYASTTPETRPARPDTPIDKNEIIKRFVEEDRKRADRENAQKEGSVRTVEVMLKKRRKLNNDITPITPLVAVPGAAGILDLDSC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01466151;
90% Identity
-
80% Identity
-