Basic Information

Gene Symbol
CDC5L
Assembly
GCA_036365515.1
Location
CM070875.1:28742448-28747583[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-16 8.5e-13 51.0 1.5 2 46 9 54 8 54 0.97
2 3 5e-12 3.1e-08 36.4 0.1 1 45 60 103 60 104 0.93
3 3 6.4 4e+04 -2.4 0.0 32 46 580 594 577 594 0.86

Sequence Information

Coding Sequence
ATGCCGAGGATTATGATAAAAGGCGGCGTTTGGCGCAATACCGAGGATGAAATCCTTAAAGCAGCTGTGATGAAATATGGTAAGAATCAATGGAGTCGTATCGCTTCCCTTCTCCATAGGAAATCTGCCAAACAATGCAAAGCTCGCTGGTTCGAATGGTTGGACCCAAGTATCAAAAAGACGGAATGGAGCAGAGAAGAAGACGAAAAGCTTTTGCACTTGGCCAAGTTAATGCCAACACAATGGCGTACAATAGCTCCCATTATTGGCCGGACAGCAGCTCAATGTTTAGAGCGTTACGAGTATTTGCTTGATCAAGCTCAAAAAAAGGAAGAGGGAGATGAAAGTGTAGATGATCCAAGGAAATTGAAACCTGGTGAAATTGACCCAAATCCAGAAACAAAACCAGCACGTCCAGATCCCAAAGATATGGATGAAGATGAACTGGAAATGTTATCAGAAGCTAGAGCTAGGTTAGCCAATACACAAGgtaaaaaagcaaaaagaaaagcTCGTGAGAAGCAGCTAGAAGAAGCTCGTAGGCTTGCTGCTTTGCAAAAACGTAGAGAGTTAAGAGCAGCAGGTATACAAGTTAcacagaaaaataaaagaaaacgtgGTATTAATTACAATACTGAAATCCCATTTGAAAAGAAACCTGCTGCTGGTTTTTATGACACATCTACGGAAGAAATAGATCCATTAGCTTCGGATTtttctcaattaaaaaaaaatgaatttataataACTTGGCAAGAGAAAGAAGAAATTGAAAGGAAAAAAGATaaacagaaattaaaacaaaggaaagaaaataatataCCAGACAACATGTTACAAGAGCCAATTAAGAAGAGAAGTAAATTAGTTTTACCAGAACCACAAATTTCTGACAGAGAATTGCAACAAGTTGTAAAATTAGGAAGAGCTTCTGAGgCTGCGAGAGAAATTGTTTTGGAAGGTGGAAACAGTGCATCGGATAGTTTATTAGCAGATTATTCTTTGACACCCAACACAGCAGTTACTCCAAGAACTCCAGCTGCTGTCGACAGAGTTCTTCAAGAAGCACAAAATGTTATGGCTCTAACTCATGTTGATACACCGCTAAAAgGTGGTATAAACAGGCAATTAACATCTACGGAATTTAGCGTACAGCCTACCTCGAATATTGTAGCTACACCAAACACAGTTTTGGCTACACCATTTAGGTCGCAGAGAAGCGAAGTTGGGGCATCACCAGCATTCAATACGCCAGGTTCCGTTAAACAAGGTGGTGTGACAGCTGTACAGACTCCCGTTCGCGATAAGTTAAATATCAATGAAGAAGGTGTTATGGAAACGTCAGAAACTCCCAATTTACAGAAGCagGCAAAGGAACAGTTAAAGGCGAGTATAAGCGCATTGCCAGCACCTAAAAATGATTATGAGATTGTTGTACCAGAAGAAGAAATGAATGAAGAGGAAACTGCTGCTTCAGCAACTGATATTGTTGAAGATCAAGCTGATGTAGATGACAGAAAACATCAAGAATTGATAGAACAGCaaaaaCGAGAATTAGCAAAACGTTCACAAGTAATTCAAAGAGCACTTCCACGACCTACTGAAGTAAACACTAATATTTTAAGACCTTCATCAGAAGTTTCTTTAACTGATTTACAAAAGGCAGAAGAACTGATAAAGGAAGAAATGATAACAATGATGCAGTATGATTCAGTCCAAAATCCTGTACAACCAAACAGCAAACGTGCTACTTCTATTATCAATCAAGCTCAAAACTACTTAGAACAACATCCTTACGAAGAATTTGATAAGGATGAACTTGAAAAGGCTAAAAGAATAATAACAGATGAAATGTCGGTCGTCAAAGAAGGTATGGCTCACGGAGATTTGAGTTTAGAATCTTATTGTACAGTGTGGGAAGAATGTTTATCACAGgttttatatttagaaccaCAGAAAAGGTATACTCGAGCAACTTTGGCCTCTAAAAAAGATAGGATTGAAGCCTGTGAAAGGAAATTGGAAGAAAATCGCATGCACATGACTGGCGAAGCGAAAAGAGCAGCCAAAATGGAAAAGAAATTGAAGGTTTTACTGGGGGGATACCAGaatcgAGCTCAAGTATTGATTAAACAATATACTGATTTAACTGATCAAATAGAACAAGCACGCCTAGAATTATCCACCTTTAAATTCTTACAAAAGCAAGAAGAAGCCGCATTACCGAGAAGATTAGACGCTCTAATGGAAGATGTAAATCGACAAAAAGAAAGAGAACGTTCATTACAAACTCGTTACTCTTTATTAAAAGAACAACTACACGAACTTGAAGCTCAGcgttatcaataa
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDESVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIQVTQKNKRKRGINYNTEIPFEKKPAAGFYDTSTEEIDPLASDFSQLKKNEFIITWQEKEEIERKKDKQKLKQRKENNIPDNMLQEPIKKRSKLVLPEPQISDRELQQVVKLGRASEAAREIVLEGGNSASDSLLADYSLTPNTAVTPRTPAAVDRVLQEAQNVMALTHVDTPLKGGINRQLTSTEFSVQPTSNIVATPNTVLATPFRSQRSEVGASPAFNTPGSVKQGGVTAVQTPVRDKLNINEEGVMETSETPNLQKQAKEQLKASISALPAPKNDYEIVVPEEEMNEEETAASATDIVEDQADVDDRKHQELIEQQKRELAKRSQVIQRALPRPTEVNTNILRPSSEVSLTDLQKAEELIKEEMITMMQYDSVQNPVQPNSKRATSIINQAQNYLEQHPYEEFDKDELEKAKRIITDEMSVVKEGMAHGDLSLESYCTVWEECLSQVLYLEPQKRYTRATLASKKDRIEACERKLEENRMHMTGEAKRAAKMEKKLKVLLGGYQNRAQVLIKQYTDLTDQIEQARLELSTFKFLQKQEEAALPRRLDALMEDVNRQKERERSLQTRYSLLKEQLHELEAQRYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309433;
90% Identity
iTF_01468776;
80% Identity
-