Basic Information

Gene Symbol
BAS1
Assembly
GCA_036365515.1
Location
CM070873.1:79726483-79729879[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.018 1.1e+02 5.8 0.0 22 43 255 278 240 281 0.76
2 6 1.1e-11 6.9e-08 35.2 0.3 1 44 287 332 287 334 0.96
3 6 7.9e-07 0.0049 19.7 0.0 2 42 342 386 341 389 0.97
4 6 1.1e-13 6.9e-10 41.6 0.0 1 45 396 441 396 442 0.96
5 6 2.9e-09 1.8e-05 27.5 0.0 1 42 449 490 449 497 0.91
6 6 2.7 1.7e+04 -1.2 0.0 3 16 529 542 528 544 0.87

Sequence Information

Coding Sequence
atGAGTGAGGACGAAGATAATCAAGATCTTTTAGATGAAATTCAAGCTTTAGAGGATGCCCTAGATCAAAAAGGAATTTTAAATGACAATGAATATAATTCATCCAAGTGTAACATTGGTATGTTACCAAGATTTGAAACAAAATTTGAGAATGGCGTCAGCAGTTTGATGGAAATCGATAATAacaatgatgatgatgaaaaGGATGATAgcaatgatgatgatgacgatgatgatgatagTAAGGATGATAAGATTGCTAATGTTAATCAACAAAATACTTATGAGCACTATGATTGTCATAACTTACAAGATCTATtcgaattaaataaaaagttaattgaatCAATTGTGTCAGCTCGTGAAAAAGTTACTGCCCTTCTTGAAGAATGTACAAGCAAACTACGTTTAGTTGAGGAACAGATTTCTAACCATGCAAACTCTTGGCAAGCTAAGATAGTAAGCTTTAATGCTGGCATGCCTTATTTTaaggataaaaattatttcacagccAAAAGAAATGAAGATACTGAAACTAAAATACGAAATGGTGAGTTACGGTTGGCTGAACTACAGCGTATACATCGTTGGAATCAGATTGATAAGAATAATTTGTTAAAAGCTATAAGATATGAAGTAACTTTAACTTTATTAACAAGAAGTCAACCTGATGAAGCATATATAAATAATGCTATCACTAAAACAAGCCAATTACCTCATGATGTTAAGGAAGCTATTGGAAGTTTAGGAACTATGAAATTTGATTGGTTAAAAATTGCTAATAACATCCCTGATAATAAACACACAGCAGAAGAGTGTGAAGTTATGTGGAATGTTTTTTTACATCCtgatattaataaacaaaaatggacTCCTAAGGAAGACAGGAATTTAACTCGTATAGCAGAAGAATATGAATTTGAAGACTGGGATGCTATTGCTAAAGCATTAAATACAAAACGTAGTGGCTATCAATGTTTTGTTAggtataatacaaataattGGAAAAATCTTATGAAAGGTCAATCATGGACACCTCTAGATGATGAAACACTTCTTTATCTTGTATCAAAACTGAAAATTGGAGATTATATACCATGGGGATATATTGCAAGTTGCATGAATAATTGGACAAAACAACAGGTATACTTCCGCTGGACATTCAGTTTAGCACctcatttaaaaaaaggaaGATTTTCAGAAGATGAAGATAAGAAATTAATCGATGCAGTAATGAAATATGGTCTAAATTTCAGTAAAATATCTGCTTTAGAATTGCCTAATAGAACAAATATTCAATTAAAGGAACACTATCAAACTTTAACAAGTAGGCGATGTAGGCCAAGACAAGTTTGGACAATAGAAACAGATACACAGCTTCTGGAACTTCAGAAGCAGTATGGACAGCAGTGGGCTAAAATTTCTGCACTCATGCCAGGTATTTCAAGAACTCAAGCCCGGCAGCGTTACTCATGCCTAATGCGTTACCAAGAAAGAGGTGTTCCTTTCGCAAGTATTAACAGACATGAAAATATCGATGAGTATGTTCTAAGCCATACTACAGTGACATTTACTACTAATACTCCTTGGTCTCGtgaaaacaaagaaatatttgtaaaacatttaaaaattgatgatcagctcataaattattttaaaagagatgaacaaAAAAATCTTAAGTCTGCACAAAGAAAGGGAAAGACATATAATTCTGATGATTTGAAAGAAGATACCAAAAAACTTCAtcatgttttattaaaattaaatgctAATTTAAATATACCAAATTTAGACTTTGATGATTGTAACTTAAGTGAAATTAATCAACAGTTACTAGTATCTTTGCAAAGATACATAGAggcgaaaaaaatatatagtaaggAAGACATTGAATTAATTAGAGAGCAAATGTTTGGTCCACAAGAAGTAGTGCCAGAAGAAAACAGATTTATACCTCCTTTaccatttaatttttgtattccaagatataaattaaaaaaaaacactggtattgattatattattaaaaataacgaatttCATCAAATGGAATTGTGTATGGTATTAGAACCAAATAAATATGTAACAGAATATATTGGGGATGACATTGAATAtgaatttgaaaaactaaaaaaacttataactGCTGAAACAACATTAAGAAAACCAGAAAGAAGTTACTCTATAAAATGTAAACCATTTGCTGCTTTCTTTGGTGATTCAGAAGAATGTGATGATGAAATAAATGTTATTATGGGGTCTTCTACTTATAGCCACCAAATGGACTATGACTGGGAGTTGAATAGGATGGTTTCGGATAACTCATCCAAAGAAAAACACGTAATAGAAAGTTGTCCTATATCAGTGATAGAGCCAAGTAGAACAACACTGCAAGCTTATCAAGAGTTATTATTGATGTCTGGGAATTGTTCTAAGAGttcaaaaacaaatttaaattgtCGATTGACTTCAAGAGGTCGTCAAGCTTTGGATTCGTTTAAAAGACGTTATCAGCAATTGTTTCATGTGCCTACTGGTTTGTCAAGAATTATACCACCGGATGTTATTgatgaaagtgcatttttaccAGCACTTGAAAagcataaaaagaaaaatgttaaaagaaaACGTCCAAAAAGTATCATAAAAGTTGTTAATAAGGAATACGTAAAAGCACCCAAATAA
Protein Sequence
MSEDEDNQDLLDEIQALEDALDQKGILNDNEYNSSKCNIGMLPRFETKFENGVSSLMEIDNNNDDDEKDDSNDDDDDDDDSKDDKIANVNQQNTYEHYDCHNLQDLFELNKKLIESIVSAREKVTALLEECTSKLRLVEEQISNHANSWQAKIVSFNAGMPYFKDKNYFTAKRNEDTETKIRNGELRLAELQRIHRWNQIDKNNLLKAIRYEVTLTLLTRSQPDEAYINNAITKTSQLPHDVKEAIGSLGTMKFDWLKIANNIPDNKHTAEECEVMWNVFLHPDINKQKWTPKEDRNLTRIAEEYEFEDWDAIAKALNTKRSGYQCFVRYNTNNWKNLMKGQSWTPLDDETLLYLVSKLKIGDYIPWGYIASCMNNWTKQQVYFRWTFSLAPHLKKGRFSEDEDKKLIDAVMKYGLNFSKISALELPNRTNIQLKEHYQTLTSRRCRPRQVWTIETDTQLLELQKQYGQQWAKISALMPGISRTQARQRYSCLMRYQERGVPFASINRHENIDEYVLSHTTVTFTTNTPWSRENKEIFVKHLKIDDQLINYFKRDEQKNLKSAQRKGKTYNSDDLKEDTKKLHHVLLKLNANLNIPNLDFDDCNLSEINQQLLVSLQRYIEAKKIYSKEDIELIREQMFGPQEVVPEENRFIPPLPFNFCIPRYKLKKNTGIDYIIKNNEFHQMELCMVLEPNKYVTEYIGDDIEYEFEKLKKLITAETTLRKPERSYSIKCKPFAAFFGDSEECDDEINVIMGSSTYSHQMDYDWELNRMVSDNSSKEKHVIESCPISVIEPSRTTLQAYQELLLMSGNCSKSSKTNLNCRLTSRGRQALDSFKRRYQQLFHVPTGLSRIIPPDVIDESAFLPALEKHKKKNVKRKRPKSIIKVVNKEYVKAPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01467024;
90% Identity
-
80% Identity
-