Taio036956.1
Basic Information
- Insect
- Torymus aiolomorphi
- Gene Symbol
- -
- Assembly
- GCA_036365515.1
- Location
- CM070874.1:69181081-69184146[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-08 4e-05 26.0 0.0 4 39 19 53 18 56 0.94 2 2 9.6 6.9e+03 -0.4 0.0 4 23 575 595 573 597 0.83
Sequence Information
- Coding Sequence
- ATGGGTACAGTGGCAAAGCGGAGCAAGAGATCTGAAAAGAACTACACTGCACCTGAACTTCAAGaagctttaaaatttatatccGAGGGGAAATCTGTCCGAGAAGCAGCACGTATTACTGGAGTTCCTAAGAGCACACTGTTTAGAATAAAAAAGGGTGATACTCGGATTAATTGTAAAAAAGGTGCTCCTTCAGTACTTAGTGAGCAAGAAGAAGAGGATATCGTCAAATGGATTTTGTATTGTGCAGAAAGAGGTTTCCCTGTGAACAAAAAACACTTGCTAGATACAGTAAAGAATTATGTTATTGACACAGGAAGAAAAAATCCTTTTACAGATGATCGCCCAGGTAAGAAGTGGTACAGTTTATTCATGAAGAGACATAGCAATTTGACTATCAGAACAGCTCAAAACCTTACAACGACTAGAGCATCTGTCTGTGAGAGTGACTTGAGAAAGTGGTTTCAGCAACTAAAAGAATATTTACAAGAAAAAGATTTGCTAACCCTGGATTCAAGTAGAGTATTTAATCTAGATGAATCGTCTTTTATGCTAGTGCCTCCAAAAAATGATGGTGTCATGGCTCAAAAAGGTGCTAGATCAGTTTATAAAGTTGTAAGTGCTAATGAGAAAGGCAATCTCACCGTTCTTTTTACTGCTGCTGCATCAGGCCAATTACTTCCACCTATGATCTTGTTTGATCTTAAGACAACACCAAGAAAAGAAACTCTTGAAAAGATACCGAGTGATTGGGCAGTGGGTAATACTGAAAAAGGTTGGATGACATCCGAtagtttttacaaatatattgtGAATGTTTTTTATAAGTGGCTTGTAGACAATAACTATAAATTTCCTGTGATTTTGTACGCTGACAATCATTCATCGCACTTAACAATGCCATTAGCTAAGTTTTGCAAGGAGAAAGAAATAGAATTAATAGGTCTGTATCCGAATTCAACGCACATTATTCAGCCATTAGATGTAGGATTGTTTCATGTATTAAAAGAGAAGTACAAAGTAGCTAATAACACATGGAGAATCCAGAATAATGTTGTTGATGTGAAAAAGCACATGTTCGCTGGAATATTAAAGCTGGCCTTGGACTCGTATGACTTCAAAAAATGCATTGCAAATGGGTTTCGAGCCTGCGGATTAGTTCCATTCGATCCTAATGCAGTTCAATACAATGTTctcaataaaaacaaaaaaaagcaaGAAAATTCAACACCGaatgatacagaaaatgttGGTTTAGACAGTTTAGCTGTCTTAAACCCTTGTATTGAAGAAACATCTACACAAGCAAATACACCAGCTGAAGCAAATCAGTCTTGCAgtgtgcataattttttaaatgatactGCTTTGCTCATTCAACAAGAGAACTTGACAAGTACGTCTCAACAAACTGCTACATTAGACGAGCCATTGGTTGTTGAACAAATTACTGCTACGTCAGATGCACAAGTTGTATCAGAGCATATTTTAAGTACTCAAgaacatttatataattttgaaattccTAGTCCAGGGCATAGTCTACCGATTATTGATCTACGTACAAATACACCCCATTATCATCataTAAGCACTTGTGTTGAAGAGACCATTGATAAAcctaatgaactaattacacaAGAGCAATCTTTAGATAGTCGTAGCGATACTTCAAATGATTCTACTTTATCGAGTCCTAAAGATGGTTCATCGAAAACTAACGAAATAGATGCAGCTGTAAACTTAATTATGAAAGAAAAAGCGATTTGTACAAATCAATCAGCAGATACAAGTACTGAAACAACAGAAGTTGCAACAAATCAGAGTTTAAATATATCACAAGAACTACTTAAAGTTGTAGCAGTTCCTCACTTTAAgccgaaaaagaaaaaagtgcgTATTACTTCTGAAGTTACAGTTAATACTTTAGAAGAAGTTGAACGAGAATTAGTACATATTGAAGTGCAAACTCTacaatctaaaattaaaattaaacaagagaaattgtaa
- Protein Sequence
- MGTVAKRSKRSEKNYTAPELQEALKFISEGKSVREAARITGVPKSTLFRIKKGDTRINCKKGAPSVLSEQEEEDIVKWILYCAERGFPVNKKHLLDTVKNYVIDTGRKNPFTDDRPGKKWYSLFMKRHSNLTIRTAQNLTTTRASVCESDLRKWFQQLKEYLQEKDLLTLDSSRVFNLDESSFMLVPPKNDGVMAQKGARSVYKVVSANEKGNLTVLFTAAASGQLLPPMILFDLKTTPRKETLEKIPSDWAVGNTEKGWMTSDSFYKYIVNVFYKWLVDNNYKFPVILYADNHSSHLTMPLAKFCKEKEIELIGLYPNSTHIIQPLDVGLFHVLKEKYKVANNTWRIQNNVVDVKKHMFAGILKLALDSYDFKKCIANGFRACGLVPFDPNAVQYNVLNKNKKKQENSTPNDTENVGLDSLAVLNPCIEETSTQANTPAEANQSCSVHNFLNDTALLIQQENLTSTSQQTATLDEPLVVEQITATSDAQVVSEHILSTQEHLYNFEIPSPGHSLPIIDLRTNTPHYHHISTCVEETIDKPNELITQEQSLDSRSDTSNDSTLSSPKDGSSKTNEIDAAVNLIMKEKAICTNQSADTSTETTEVATNQSLNISQELLKVVAVPHFKPKKKKVRITSEVTVNTLEEVERELVHIEVQTLQSKIKIKQEKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -