Basic Information

Gene Symbol
ct
Assembly
GCA_036365515.1
Location
CM070873.1:263172180-263188109[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.4e-28 3.6e-23 84.1 0.0 2 72 401 472 400 477 0.95
2 3 2e-32 8.8e-28 98.9 0.0 3 77 818 893 816 895 0.96
3 3 1.9e-30 8.5e-26 92.5 0.0 3 76 1058 1132 1056 1135 0.96

Sequence Information

Coding Sequence
aTGAGCCTGCAGCGCCTGCAGGAGACGAGCGCGCAGGCGACGACGCGGCTCGAGGAGGAGCTGGAGGCACATAGGCAGCACATCAACCGGCTCGAGGCGAAACTCGACCGGCAGAAGGACTACGACGAGCTGAAGCGCGAAATCAGCGTGCTGCGCTCTGTCGATCTGTCCCAGATACCGACCGGCGAGCCCGGCAAGAGCCTCGAGCAGGTGCTCATGGAGCGCTCCAAGGCGCTTCAGCAGGCCGAGAACCTCAAACCGCCCAGCACCCCCGACGCACTAGGTGGACTATCGTCACCCCTGCAGCGGGCCGCGACCGCGTCGCCGCACGGTTGCAGCGCGGTGATCGCACCTCCATCCTCCTCCCTCGTGTCCTCCCAATCGTCGGTTCCCAGCCGCTCCACCCCCACGCCCTCCTCCTCGTCCAGCGCCGTCGTGGGCGCCGGCGGCGCCGCCTCCTCGACGGGCTCTACGTCGCTCCTCTTCCCCCCGCCCCTCCAGAATGTCGAGACCTTCGGCTCGTTTCTCGGCGAGGAAATCGTCGCCAACTGGAGACGGTCCCTGGAAAGGTCAATCATGAgtcagcagcagcaacagcagcagcaacaacagcagcaacagccgACGCCCCAAGCCTCCGCAGTCGGTCTCCATCCGTGCGCAGCCAACGCCATTGCAGCGCCAGTACCGCCCGCTAGTCTAAACCACCTCCCGTCGCCGACAGATCCGATCTCCACGTCCAGCACGCCGGCCAAGTCGAGCACACCTGCGGCCCTCGACGCTGACAAGCCCGGAACGCCGGTGTCCGGCCACGAGACCCCGACCCCGGCCACGCCATCCTCGACGACGACGCTCACATCGCCGCCGATGCTCCAGCCACTCATGGTCGACAGCCTCTCGCTGAACAACGGACCCGTCACAGCTCCGGCGCCACCACCCAAGAGTCCTGCCGAGGAGTCACCCTgtcacaacaacaacaacagccaTCATCTGGCCAACAATAACATCGGCGGCCTCAATGTGCTGGAGAGCCTGAAGAGTCCCTTCCGTTTCGACGAGCGCTCGCATCCGTTCAGATTCGGCGACGAGTTCGGAGCGGCCGGTATGGCCGGAAGACTCGGCGAATCCTTGATCCCGAAGGGCGATCCCATGGAGGCAAGACTCCAGGAGATGCTCCGCTACAATATGGACAAATACGCCTCGCAGAACCTCGACACGTTACACATAGCGCGACGGGTACGCGAACTGCTCTCGATACACAACATCGGCCAGCGGCTCTTCGCCAAATACGTGCTGGGTCTGAGCCAGGGCACCGTGAGCGAGCTCTTGAGCAAGCCCAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACAGCTATCGTAAGATGCATGGCTGGGCATGCGACGACAACGCCGTGCTGCTGCTCAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGCATGCCGGCTTTCGCGCGTGGCCCACAGGAGGGTAGCGGCGCCGGTGAAATGAGCGAGGAGCGCATCGCGCACATGCTCTCCGAGTCCGGACACATGCAGGCGGCGCTGAGCCGGCAGAGCGAGACCGAGGCGTCCAACGACGCCGACAGCAAGAGTCCAAGTCGGCTCAACTGCCCGAGCCCGTTCGGCAAGGACCGCGCCAGCAGCGTCGACAGCCAGAACCGCAGACTGAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGCGAGGATCTACCAGGAGGAACTGGCCAAGATTATGGGCCGCAGGGTCGAGGATATGCGCGgaccgcgagacttccccaccaGCGCGATGTTTCCCCACTTTTTCAGTGGCCAAAACCTGCAGAGCATGGGCACAACCGAGGAGATCCGCATGGCTCTGGACGCCTACCACCGCGTGGCTCAGGGTCTGCCCTATCCACCCCAGATCTCGGGCCTGCTAGCACTCCAGCAGCACGCCATTCAGCAGCACCACCTGGCGACGAACGGTGGCGCTGGTCCAGGCGCGGGCTCGGCTGCCGCGGCTGCCGCAGCCGCAGCCGCCGCCCAGGACCTTAGTCTGGGCAACATCCTCAGGAACAAGATGATCAACGGTGTGTCCGAGGAAGAGAAGGAGAAGATGGAGGAGGCCATGAGGCACGCGGGCAGCGCCTTCTCCTTGGTCAAGCCCAAGCAGGAACCCACAGGCGCGCAATCGACGCCTGGTGGCTCGAGCGCCAGCTCGCCTCTGGGTAACTCGATCCTACCCCCGGCGATGACGCCCAGCGAGGAGTTCACGGGCGCCGCTGCGGCCAGTCCACTCCAGCGGATGGCCTCCATCACGAACAGTCTTATCAGTCAACCGTCCACGCCGACCCACCATTCATCCAGTCAGCGACCGCTTAAGGCTGTGCTGCCGCCAATCACCCAACAACAGTTCGACATCTACAACAATCTCAACACGGAAGATATCGTCAAGAGGGTGAAGGAACAGCTCTCCCAATACTCGATCTCTCAGCGCCTATTCGGCGAATCCGTCCTGGGCCTGTCGCAGGGCTCGGTGTCGGATCTCCTGGCGCGGCCCAAACCCTGGCACATGCTCACGCAAAAGGGTCGCGAGCCCTTCATACGCATGAAGATGTTCCTCGAGGACGACAACGCCGTGCACAAGCTCGTGGCGAGCCAGTACAAGATCGCCCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACGCCGATGAAGCCCATGCCACCGACGAAGCTCGTGCAGGAGCAGCTGCAGAACGCTGCGAAAGCTCAGGCCGCAGCGCAAGCCGCCGCCCAGGCCGCAGCGGCAGCCCAGCACCAGCAGGAGAGCCAGATGCAGCTCGGCCCACCTCAGCCAAGTCCGCAGCACCCACCTCACCCCCAAGTGCCGCCCATGATGCTGACCCCACCTGGAGGCATCCTGCCGCACGCGCAGATCAGCATGCAGGAGCTGCAGAAGAAGCAGCatcagcaacagcagcaggtgcagcagcagcagcagtcccAGCAGCAGATGGCCATTCACTCGCCGCACCAGATGGCGCCGACGACAATGCGCGCTCTGCAGCCCCACATCTCGCCGAGCGTCTACGAGCTGGCGGCTCTCACAACGGACCTAGACACACAGACCACCACGACCAAGATCAAGGAGGCTCTGCTAGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCCGTCCTCGGACTGTCCCAGGGCTCGGTCAGCGAACTCCTGAGCAAGCCCAAGCCCTGGCACATGCTCAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGATGTGGCTGGCCGACCCGAACAACGTCGACCGGCTGCAGGCGCTGAAGAACGAGCGGCGCGAGGCCAACAAGAAGCGGCGCATCAGCCTGCCCGGCCACGACAACAGCTCGGACACGTCGAGCAACGACACGGCCGAGTTCTACCACGCGGCCTCGCCCGGGCCCGGACCCACCTCCGCCAAGAAGCAGCGCGTCCTCTTCAGCGAAGAGCAGAAGGAGGCGCTGCGACTGGCCTTCGCCCTCGACCCCTACCCCAACGTCGCGACGATCGAGTTCCTGGCGAACGAGCTCGGCCTCTCGTCGCGCACCATCACCAACTGGTTCCACAACCACCGCATGAGACTGAAGCAGCAGCCGCCGCACGGCCAGCCCGAGCCGCCCTCGAGTCGCGAGCCCGGCCAGCCGTTCGACCCCGTGCAGTTCCGGCTGCTCCTCAACCAAAGACTGCTCGACATACAGAAGGAGAGACTCGGCCTCGGCACCGTGGCGCTCACCTACCCGCCCTACTTCAACCCGAACCTCGCGGCCCTCGTCGGCAGCGCCCTCAAGGAGCAATGCTCCGGCCTCGACCTGTCCATGGGCTCGCTGAAGCGCGAGCCCAACCAGGAGTTCGAGGACGAGGACGTCGACGACGCCATGAGCAATATCGGCAGCGAGGACTCCGAGGGCTCCGCGGCCAGCATAAAGCGCGAGCCCACGGAGGCACCGGCGCCGGCCAGCAGCACCTCCTCGAGGTCGAACAGGCGGAAACCCGCCGCCCCTCAGTGGGTCAATCCCGAGTGGCAGGAGCCCGCGAGGACGGGCGACGAGGTTATTATTAACGGAGTCTGCGTCATGCAGACCGACGACTACGGCGTGAAGCGGGAGGCCGAGGAGACGGTCCGGGTGGAGCCGACGCCCGTGCAGGACCGATACGAGGAGGACGCCCAGAGCGACGTGTCCTCGGTCTCCGCGACCAATCCCCCGGACCGCGAGAGCCCCTCGCCCAGTCCCAAGTCCGCGCAGAATAGCCCCGGGACGTCGCCCAGGCCGCCCTCGGCCCCGCAGGCGCCACAGCCCGTCGAGGACAGTCCTAAGAACGTCGTGAAGCAGGAGCCCGAGGAGCCCTGGGACTATTAA
Protein Sequence
MSLQRLQETSAQATTRLEEELEAHRQHINRLEAKLDRQKDYDELKREISVLRSVDLSQIPTGEPGKSLEQVLMERSKALQQAENLKPPSTPDALGGLSSPLQRAATASPHGCSAVIAPPSSSLVSSQSSVPSRSTPTPSSSSSAVVGAGGAASSTGSTSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQQPTPQASAVGLHPCAANAIAAPVPPASLNHLPSPTDPISTSSTPAKSSTPAALDADKPGTPVSGHETPTPATPSSTTTLTSPPMLQPLMVDSLSLNNGPVTAPAPPPKSPAEESPCHNNNNSHHLANNNIGGLNVLESLKSPFRFDERSHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKEYVSGKEQGMPAFARGPQEGSGAGEMSEERIAHMLSESGHMQAALSRQSETEASNDADSKSPSRLNCPSPFGKDRASSVDSQNRRLKKYENDDIPQEKVARIYQEELAKIMGRRVEDMRGPRDFPTSAMFPHFFSGQNLQSMGTTEEIRMALDAYHRVAQGLPYPPQISGLLALQQHAIQQHHLATNGGAGPGAGSAAAAAAAAAAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPTGAQSTPGGSSASSPLGNSILPPAMTPSEEFTGAAAASPLQRMASITNSLISQPSTPTHHSSSQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAAQHQQESQMQLGPPQPSPQHPPHPQVPPMMLTPPGGILPHAQISMQELQKKQHQQQQQVQQQQQSQQQMAIHSPHQMAPTTMRALQPHISPSVYELAALTTDLDTQTTTTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLADPNNVDRLQALKNERREANKKRRISLPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLSSRTITNWFHNHRMRLKQQPPHGQPEPPSSREPGQPFDPVQFRLLLNQRLLDIQKERLGLGTVALTYPPYFNPNLAALVGSALKEQCSGLDLSMGSLKREPNQEFEDEDVDDAMSNIGSEDSEGSAASIKREPTEAPAPASSTSSRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSVSATNPPDRESPSPSPKSAQNSPGTSPRPPSAPQAPQPVEDSPKNVVKQEPEEPWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309398;
90% Identity
iTF_01469451;
80% Identity
iTF_01464919;