Basic Information

Gene Symbol
osa
Assembly
GCA_036365515.1
Location
CM070877.1:63118580-63120271[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-10 8.7e-06 28.8 0.0 48 89 17 55 14 55 0.91

Sequence Information

Coding Sequence
ATGACCTTCTCGATCCGAATTCTGGATCCATCGTATCCTAGTACTCTTAGAGTTACTAAAAACAAAACGTGGAAAGATATAGCTGGTCTTCTGGGTATCGGTGCAAGCAGTAGTGCAGCATACACTTTGCGTAAACATTATACAAAGCACTTATTGGCGTACGAATGTCACTTTGATCGAGGCGGCGTTGACCCTCAACCAATAATAAATCAAGTTGAAGCTGGATCAAAAAAAAAAGGATCTAAAGGCACCACTTCTGTACCATCACCAGGGAGCATACTTCGAGTTCCAGTAAACTGTAATGAAGAAGCTGCCTTGTTCACTGCCGTAAGCGTCCGTCGTTCCATCGCCGTCCGCCTCGTCACCGTCACGACGCAGCCTCCAAGATCAGCTGAAACTTAA
Protein Sequence
MTFSIRILDPSYPSTLRVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKGSKGTTSVPSPGSILRVPVNCNEEAALFTAVSVRRSIAVRLVTVTTQPPRSAET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-