Basic Information

Gene Symbol
KDM5A
Assembly
GCA_036365515.1
Location
CM070875.1:220792297-220806689[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-25 4.7e-21 77.7 0.0 2 89 147 230 146 230 0.94

Sequence Information

Coding Sequence
ATGGTCTCCAAGTCGGGCAACAACAGATACCAGGCAGCAGGAGGCGGAGCTGCCACGGTGAGCAGCGGCGCCGAGAGCAGCTACGGGGCAAGCAGACGCGCGGCCGCGGCTACGGCCACAGCAGCAGCCGCAACAGCGGCAGCAGGCCAGGACAGCCCAGCCGCTGCCCTAGCGGCGGCCACCACGGCGACGTCCCACCAGCGCGAGGACTTTGAGTTCCAGGCGCCGCCCGAGGCTCCGGTCTTCGAACCTACGAGCGAGGAGTTCCTCGATCCCCTCGGCTACATCGCTAAAATACGCCCGATCGCCGAGAAGTCGGGTATTTGCAAGATCAAGCCGCCACCCAATTGGCAGCCACCATTTGCAGTTGATGTGGATAAATTCAAATTTGTCCCCCGAATACAAAGGCTAAATGAATTGGAAGCTAAAACTAGAATCAAACTCAATTTTCTGGACCAAATAGCAAAGTTTTGGGAGCTTCAGGGATCTTCATTGAAGATTCCACTAGTTGAGCGTAAAGCACTGGACTTGTACTCACTGCACAGGATTGTAACTGACGAAGGTGGTATTGAAGCTGTAACAAAAGAAAGAAGATGGGCAAAGGTTGCAAATAAATTGGGATACCCTTCTGGACGCAGTGTTGGCAGCATTCTTAAAAGTCATTATGAAAGAATTTTATATCCATTTGACGTCTTCAAGCAAGGAAAAACTTTAACTGATATTAAAATCGAACCTGATGGCGATGTAAATGAGAAAAAAGATAGAGATTATAAGCCACATGGAATTATATCCAGACAGCAGATCAAACCTCCACAAGAAAAATTTTCGCGACGATCCAAGCGCTTTTCTGGACAACAGTCGGATGGATGTCAGTCACCTATTAAACAGGAAGACTGCAAAGAAGAATTTGATGTAGATTGCAAACCTAACATCATAGGCAAAGGTTTTGATACTAAAGAAGGTATTAAAGGTAAAAAGTGCACTGATTCCAAGGACAATGTTAAAGGTAAAACTTTAGTTGAGACCAAGGATAATATTAAAACTCGAGGTGCATTAGCAGAAAAGGATAAAGAAAACAGTAAAGAGCTTAAGAAATTGCAGTTCTATGGGCCTGGTCCCAAAATGGCTGGTTTCAATACCAAAGAaccaaaacaaaaatcaaacaAAACAAGAGGAGTCAAACTAGTCTATGATTTTGATCCtCTTGCTAAATATATTTGTCATAATTGTGGAAAAGGAGATAATGAAGAAAACATGTTACTTTGTGACGGATGTGATGATAGTTATCATACATTTTGTTTGTTACCACCATTAACAGAAATTCCAAAAGGAGATTGGAGATGTCCAAAATGTGTAGCTGAAGAAGTATCAAAGCCAATGGAAGCTTTTGGATTTGAGCAGGCACAGAGAGAATATACTTTGCAACAGTTTGGAGAAATGGCTGATCAGTTTAAGAGTGACTATTTCAATATGCCTGTTCATATGGTACCAACGGAACTTGTAGAAAAAGAATTTTGGAGAATAGTATCGTCAATAGATGAAGATGTTACAGTTGAGTATGGTGCTGACTTGCACACAATGGATCATGGGTCTGGTTTTCCAACAAAGACAAGTGTTAATCTCTTTACTTGTGATCAAGAGTATGCAGAGTCTTCCTGGAATTTAAACAATTTACCAGTACTGCATGGGAGTGTTCTGGGTCACATTAATGCAGATATCAGTGGCATGAAAGTTCCATGGATGTATGTAGGAATGTGTTTTGCAACCTTCTGTTGGCACAATGAAGATCATTGGAGTTATTCTATCAATTATCTACATTGGGGTGAACCCAAAACATGGTATGGTGTACCTGGTTCTGAAGCAGAAAAGTTTGAACGTTCTATGAAATCTGCTGCACCTGAACTATTTCAAAGTCAACCAGACTTGCTTCATCAGTTAGTCACCATAATGAACCCTAATATTCTTACACGTGAAGGAGTTCCAGTATTCAGAACTGATCAACATGCTGGAGAATTCGTTGTTACTTTTCCCAGAGCATACCATGCAGGTTTTAACCAGGGTTATAATTTTGCTGAAGCTGTTAATTTTGCTCCTGCAGATTGGttacaAATTGGTAGAGATTGTATTGCACATTACTCAAATCTTAGAAGGTTTTGTGTTTTTTCACACGATGAATTGGTCTGCAAAATGTCTTTGGAACCAGATGCTTTGGACATTGGTATTGCTACAGCTACATATCATGATATGATAACTATGGTTGAGGATGAaaagaaattgagaaaaaatctACTAGAATGGGGTGTAACTGAAGCAGAACGTGAGGCTTTTGAACTGTTACCTGATGATGAAAGGCAATGCGAGGCATGTAAGACTACATGCTTTTTGAGCGCAGTGACTTGCTCATGTCACAAATCTCAGTTAGTTTGCTTAAGGCACTTTACCGATCTTTGCGAATGCCCTCCTGAAAAACATACGTTACGATATAGATATACCTTAGACGAATTACCAATCATGTTGCAAAAGCTTAAATTAAAAGCCGAGTCATTTGACTCATGGGCAAGCAAGGTTAAAGAAGCTATGGATCCAAAAGGTGAAAAAATAGAGCtgaatgaattaaaagaattattggATGAAGCAGAAAATAAAAAGTTCCCTGAAAGCGAATTGCTCACTGCCTTAACAACTGCTGTGCAAGATGCTGAGAAGTGTGCTAGTGTTGCAAGACAGTTGTTAAATAACAAACAAAGGACTagAACAAGGCAATCTGTTGATGCCAAATTTAAACTTACTGTTGAAGAGTTAACATTATTTCATCAAGAAATCACAAATCTTTGTTGTGAACTCAAAGAAGCAGATggtgttaaatatatattagatCAAGTGCTTCAATTCCAAAAAGATGCTGAAGAATTAGAGGCACAAGAAGCTGATTGTGaccttgaaaaacttgaaaagtGTATTGAATATGGCGATTCCATTTGCATTGAATTACCGCAACTTACAAGATTGAAACAGAAATTACAACAACTTCGATGGTTAGATGAAGTGAAGTCGATTCAAGAAGAACCAAAATCTGTGACGCGGCAAGATTTAGGAAAACTTATAGAAGAGGGAATGAATATTCCTCCACACTCAACTATAGAAAATGCTTTAGCTCAGCTGCAAAGTCTAATGATTAATATAGATAACTGGGAAGATAAAGCTAAAGTTTACCTTCAAGCCTCAAAAAATAGACAAACCATTGCAGCTGTTGAAGAACTTATTGCAGAAGCAGAAAATATAGATGCGTACTTACCAGAACTAAGTAATCTTAAAGACATtttaaataaagctaaaaattgGATAAAAACAGTTGAAGAAATACAAGCAAGAGATAATTTTCCATATTATGATACTTTAGATGAACTTGTCCGTAAGGGCAGGACTATTCCGTTACATCTTGCTGCTTTACCAGCACTCGAGTCAACTTTAGCTCAGGCGAAAATATGGAAAGAAAGGACAGCTAGAACATTCCTACGTAAAAATTCACATTATACATTAATGGAAGCTCTTTCTCCTAGAATTGGTGTTGGTTTACATGCTATGAAAACTCGTAAAAATACAAAAGGAGAAGATGCCATTGGTGCTGTATACGTATGTGATACTAAATTAGATGATTCAAATGATTCAGCGACTGTTGTAGCGGCGTTTAAATTGGCGGAACAGCGGGAAATGGAAGCCATGAAAAATTTAAGAGAAAGAAATGTTAACAAAATGCAGGCTGACGATTCACGATTTTGTGTATGTCGCCGAGCGAAATTCGGCCAGATGTTACGTTGCGAACTTTGCAAAGATTGGTTTCATACAAACTGTGTTCCTGTTCCAAGAACTCCATATAAAGGCAAGCAACAGACATCGCGGATGACTAAATTTTTGTGTCCTTGTTGTTTACGTTCACGTAGGCCGCGACTAGAAACAATTCTCTCACTTTTAGTAAGTCTTCAAAAGATTCCTGTCCGTTTACCAGAGGGTGAGGCACTTCAATGCCTTACGGAACGTGCAATGAATTGGCAgGATCGAGCGCGGCAAGCCTTAGCAGCCGAAGAAGTGTCTTCAGTGTTGGCAAAACTTAGCATTTTGTCTCAGAAGTTAACGGAAGCTGCAGCTagagaaaaaactgaaaaaattataagtacGGAACTTAAAAAAGCTGCAAATAATCCAGAACTTCATCAAAGAGTACAAGCCATTGCTTCCATGAGCGGTGTTCATTCTGATGACAGCGTTATAAGTATACCTGAAGATGATGAGAGAATAGATGATGAAGATGATGACGATGACAGTGACGAGGATGTGCTAACGATTGATGAAGATGAACCAAATAGCAGTGGTTTTAATAGTAATGAGCATGCATACTCGTCAGCGTCAAAATTCCCCTCGAAATCGTCTGGAGATGATAAAGATAAATTAGTAACTATTTCTAGTAGTACAACAACACGACTAGAAGAACTAATGATGGAAGGAGATCTTTTAGAAGTTGCTTTAGACGAAACAGAACACATTTGGCGAATCCTGAGTCAAACGTGTACTTCCAAAAGTGTACGGAAATACGCACCACTAGACCAATCAACACCTAACAATGATAATAAAGAACTTAAAAAACAACCTCAACCAAGAGGTCGTAAACGAAAGTCTGATGAAGCCGATATGTTGAAAAAGTTTGGTCGTCAAAAAGTAGACGAAAAGGTTGTTGTGAAACGCAAGGGATTAAATAAAGAAGTGAAATCAACCACACCAGCTGGCTCGATGAAACGAGGACCACGCAAgATGAAACGAAAAGACAGTGATGAAGGACCTAAAAGACGAACAGGAAACAGGAAGAAAACAAAACAAGATACTTCCGACGAAGAAGAAGATTGTGCCGCTGGTAACTGTTTAAGACCAAATGGACGTGAAGTCGACTGGGTCCAGTGTGACGGTGGTTGCAATGGATGGTTCCATATGCATTGTGTTGGTTTGGATCGTACGGAGCTTGCTGAAGAAGATGATTATATTTGCACTAATTGCAATGACGGAGATGTGAACTCTTCGAGTCAACAGGATTGTCACTCTTCGCAGTCATCACTCGCCGATTTGactgatgatgaaaatgatTTAGAAAAAGATGAACAAGAAACAGTCAGCATCATTAGGATTTATTAA
Protein Sequence
MVSKSGNNRYQAAGGGAATVSSGAESSYGASRRAAAATATAAAATAAAGQDSPAAALAAATTATSHQREDFEFQAPPEAPVFEPTSEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIEAVTKERRWAKVANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLTDIKIEPDGDVNEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQQSDGCQSPIKQEDCKEEFDVDCKPNIIGKGFDTKEGIKGKKCTDSKDNVKGKTLVETKDNIKTRGALAEKDKENSKELKKLQFYGPGPKMAGFNTKEPKQKSNKTRGVKLVYDFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLHGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFERSMKSAAPELFQSQPDLLHQLVTIMNPNILTREGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLQIGRDCIAHYSNLRRFCVFSHDELVCKMSLEPDALDIGIATATYHDMITMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHKSQLVCLRHFTDLCECPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGEKIELNELKELLDEAENKKFPESELLTALTTAVQDAEKCASVARQLLNNKQRTRTRQSVDAKFKLTVEELTLFHQEITNLCCELKEADGVKYILDQVLQFQKDAEELEAQEADCDLEKLEKCIEYGDSICIELPQLTRLKQKLQQLRWLDEVKSIQEEPKSVTRQDLGKLIEEGMNIPPHSTIENALAQLQSLMINIDNWEDKAKVYLQASKNRQTIAAVEELIAEAENIDAYLPELSNLKDILNKAKNWIKTVEEIQARDNFPYYDTLDELVRKGRTIPLHLAALPALESTLAQAKIWKERTARTFLRKNSHYTLMEALSPRIGVGLHAMKTRKNTKGEDAIGAVYVCDTKLDDSNDSATVVAAFKLAEQREMEAMKNLRERNVNKMQADDSRFCVCRRAKFGQMLRCELCKDWFHTNCVPVPRTPYKGKQQTSRMTKFLCPCCLRSRRPRLETILSLLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALAAEEVSSVLAKLSILSQKLTEAAAREKTEKIISTELKKAANNPELHQRVQAIASMSGVHSDDSVISIPEDDERIDDEDDDDDSDEDVLTIDEDEPNSSGFNSNEHAYSSASKFPSKSSGDDKDKLVTISSSTTTRLEELMMEGDLLEVALDETEHIWRILSQTCTSKSVRKYAPLDQSTPNNDNKELKKQPQPRGRKRKSDEADMLKKFGRQKVDEKVVVKRKGLNKEVKSTTPAGSMKRGPRKMKRKDSDEGPKRRTGNRKKTKQDTSDEEEDCAAGNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICTNCNDGDVNSSSQQDCHSSQSSLADLTDDENDLEKDEQETVSIIRIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
90% Identity
iTF_01465967;
80% Identity
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