Basic Information

Insect: Tortrix viridana
Gene Symbol: Znf219
Assembly: GCA_963241965.1
Location: OY725176.1:764141-776121[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.13 10 7.5 3.2 1 23 375 398 375 398 0.92

2 7 9.8e-05 0.0078 17.3 1.2 1 23 538 560 538 560 0.98

3 7 4.7e-05 0.0038 18.3 0.3 1 23 565 587 565 587 0.97

4 7 1.6e-05 0.0013 19.7 1.1 1 23 593 616 593 616 0.93

5 7 1e-06 8.2e-05 23.5 1.4 1 23 622 644 622 644 0.99

6 7 1.1e-05 0.00089 20.2 3.1 1 23 650 672 650 672 0.99

7 7 1.4e-06 0.00011 23.1 1.1 1 23 678 700 678 700 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.13	10	7.5	3.2	1	23	375	398	375	398	0.92
2	7	9.8e-05	0.0078	17.3	1.2	1	23	538	560	538	560	0.98
3	7	4.7e-05	0.0038	18.3	0.3	1	23	565	587	565	587	0.97
4	7	1.6e-05	0.0013	19.7	1.1	1	23	593	616	593	616	0.93
5	7	1e-06	8.2e-05	23.5	1.4	1	23	622	644	622	644	0.99
6	7	1.1e-05	0.00089	20.2	3.1	1	23	650	672	650	672	0.99
7	7	1.4e-06	0.00011	23.1	1.1	1	23	678	700	678	700	0.98

Sequence Information

Coding Sequence: ATGAGGAATGTGAACCATCATCTCTTGGAGGATAAGATGGACGAGGAGGTGACGCACTATATCACACACCAGACGGGCGATtctgTGCATGTGGATGCCAATTCGTTGGCATTAAATATACAAGATGAGGGAGGAAGAGTGGTGGTCATGCATCCACAGAGCTTTACGCAGCAAATGTgcagGCAAGTGTCCGTGGGTGACCAAGTGGAAGGCCAGTGGGGGGAGGAGATCATGGACCCGGAGACCAGACTAGCAGCCATCGTAGCACACCTCACGCAGAACTCTCGCAACCTGCACCACCATCCACAACACAAGATTACATCATTGAGGGGTGATGTGGAGTCTTCAGTGATGCTGGATGGGCAGATGAGGCTGTTTAATGCACAAACCCTGGAGCAGCACAGCGAGCCCCTCGtggcgctgccgccgccgccgccgctggcgggcgcgcgcgcgggcgcgggctgGTTCGACGCTAAGTCCGACACTACCCTCAAAAGCGACAGCCCACTGCTGGACTCGGACGGTCAAGTCCTGGAGCTGGCGACTCGGCAGCCCAGCCGCAAGAGCCTGCCCCACAAGAAAAGGATCTCCCGGAAACTTAAGAGGAACACTGGGAACTGTACGCCGCAACAGGACATAGTGCTGATCAGCTGCCAGGAGGAGGGCGCGCAGGAGGAGATCCTGCCGGACAGCTTCGCGCATCCAGCCCAGCTCGCCGCTGACCCGCACCATAATATTACCCACGAGGTGCGGCCCGTGCTGCTGTGCGCGTGCGGCGCCTACTTCGGCGAGGAGCAGCGCAGCTTCTACCTCCACCTGCGCGCGCACTACGAGCCCCCCCACCCCCCGCACCTCGCGCCCGACAAGATGACAGATACTTGTATAGATGAAAACGTAGCGACCCTCCCCGACTCCATAGTAGAGCTGTCGTTAGAGAACACAGTCCCCAAAACTATGTACCAAACCATGGACAAACACATCCTCTACACCTCAAGCGAAAAGCCCATTCAATACTCTAGCAATAAGCTCCAGTATTCCATGACAAGTATAGATAAAGAAGTCCCTTCGAGTGATGTGGAAAAGGCGGATTTGTACGAGTCGCTAGATAAATTGGAGATATATAATTGTATAAAGTGTAATAAGACTTTTAGGAAGCAAAAACAATGTGAAGCGCATATCAAAGAAGTTCATGGgaagGTGGAAGACATGGGCGAGTTCAGCGAGCCCGAGGACCTGATGGAGGGCATCCACGTGGCCGTGGACGCCGAGGACGTGGGCGCGGAGGCCGCGGCGCTGGAGCCCTACGCGCCCGCGCTGCCGCACCTCACCGTCGACCGCGGCACCGTGCGCCAGGACCACGTGCGCCACTGGGAGCTGCGTGCCGCCTGCCCCGCCTGCCCCGCCGGCCCCGCCTGCCCCGCACCGCACCACCTCAAAGAAGAAGTATTCCAACGAATATTCGAGGAAGTTCCCACCACCGACAACTCAGCTTTCGCCGACAACATTATAACCGACACGGAAGTGCCCGAGCCCGCGAAAGAACCCGAACCGGAGCCCGAGCCCGAGCCCGAGAATAAACTCGAGAAGGGCAAGAAGCCCGGGAAGAGGTTCGAGTGCCCACAGTGCGGGAGAGTGTTCCAGCACAGGAACAGCTTGTTGTACCATGTGCTGTCGCATGCCGGCAAACAGCATGTTTGTTGGGAGTGCAATAAAGGATTTTATACCGTCGGTGCTTTAAAGATCCACCAACGCGTACACAATGGTGACCGGCCGTACAAGTGCGAAGAGTGCCAGCGGGAATTCCGGCAGTGGAGCGATCTCAAATACCATAAAGTGTCGCTGCACTCCAACCAGAAACATTTCAAATGCGAGTTCTGCGGCAAGGAGTTCGCGCGCAAGTACTCGCTCAGCGTGCACCGGCGCATCCACACGGGCGAGCGCAACTACAAGTGCGAGTACTGCAACAAGAGCTTCCGCGCCTCCTCCTACCGCCTCTCGCACATGCGCACGCACACGGGTGACAAGCCATTCGAGTGTACGCAGTGCGGCAAGTGCTTCCGCGTCGCCGGCGACCTGCGCCGCCACGCGCTCACGCACGACaagctgcgcgcgcgctgcgACAAGCCGCCCGCCAAGCACGTCAGGGACGACGACGACAAGAAAACACCCAAACAAAAAACAGACAAAAAAGAAAAGAACCCAAAGAAAATAGCCGCAGCCTCCACCACGAAGCTCCCCATACTTAAATCCATACTCGACAGAAAAACGCCCAAAGCAAAAAAAGAAGTCATCAAAAAAGTTGGAGCGCCAAATGTCACAACAAACACAATCAAAGAAGAACAGTTCAAGATGAACAGTGAATTTACTAATAACGTAGAAGTATTTGATACTAGGGATTATAAGTTTAAGGAAGTATACGTGCCGAAAGACGACCAGTTGAGACAGTATGAAATGGAGGAGAGGTTGCCGGATGAAAAGAATTTCGCTGTCCTCAAACCTATGTTTAGTAATGACAATGAAACTATAGAAATTGAGAAAATTTATGCGAACAGAACTGAAAATACTGACGGGAAAATGGCAGTGTTCACTCATGTTGAAAAGTGTAAAGATTACGGTGGTGCGGTAATATCCAATTCGCAAGTGACTCTTTCTGATATTAGGCATTTAGACAGGGAGGTCCGAGATGTTAGGAGTGACAGTTTGAACGGTGAGAATATCGAAAATGGGTTCTTAGAAAGGTTAGCTGCTTTGTATAATATACCGGCGGTATAA
Protein Sequence: MRNVNHHLLEDKMDEEVTHYITHQTGDSVHVDANSLALNIQDEGGRVVVMHPQSFTQQMCRQVSVGDQVEGQWGEEIMDPETRLAAIVAHLTQNSRNLHHHPQHKITSLRGDVESSVMLDGQMRLFNAQTLEQHSEPLVALPPPPPLAGARAGAGWFDAKSDTTLKSDSPLLDSDGQVLELATRQPSRKSLPHKKRISRKLKRNTGNCTPQQDIVLISCQEEGAQEEILPDSFAHPAQLAADPHHNITHEVRPVLLCACGAYFGEEQRSFYLHLRAHYEPPHPPHLAPDKMTDTCIDENVATLPDSIVELSLENTVPKTMYQTMDKHILYTSSEKPIQYSSNKLQYSMTSIDKEVPSSDVEKADLYESLDKLEIYNCIKCNKTFRKQKQCEAHIKEVHGKVEDMGEFSEPEDLMEGIHVAVDAEDVGAEAAALEPYAPALPHLTVDRGTVRQDHVRHWELRAACPACPAGPACPAPHHLKEEVFQRIFEEVPTTDNSAFADNIITDTEVPEPAKEPEPEPEPEPENKLEKGKKPGKRFECPQCGRVFQHRNSLLYHVLSHAGKQHVCWECNKGFYTVGALKIHQRVHNGDRPYKCEECQREFRQWSDLKYHKVSLHSNQKHFKCEFCGKEFARKYSLSVHRRIHTGERNYKCEYCNKSFRASSYRLSHMRTHTGDKPFECTQCGKCFRVAGDLRRHALTHDKLRARCDKPPAKHVRDDDDKKTPKQKTDKKEKNPKKIAAASTTKLPILKSILDRKTPKAKKEVIKKVGAPNVTTNTIKEEQFKMNSEFTNNVEVFDTRDYKFKEVYVPKDDQLRQYEMEERLPDEKNFAVLKPMFSNDNETIEIEKIYANRTENTDGKMAVFTHVEKCKDYGGAVISNSQVTLSDIRHLDREVRDVRSDSLNGENIENGFLERLAALYNIPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -