Tvir024759.1
Basic Information
- Insect
- Tortrix viridana
- Gene Symbol
- ZFY
- Assembly
- GCA_963241965.1
- Location
- OY725198.1:7952025-7960270[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 2.4 1.9e+02 3.5 1.2 2 10 269 277 268 289 0.76 2 23 0.76 61 5.0 1.0 2 23 320 342 319 342 0.94 3 23 0.0037 0.3 12.3 4.3 1 23 347 370 347 370 0.96 4 23 0.27 22 6.4 2.8 3 21 375 393 374 394 0.93 5 23 4.3e-05 0.0035 18.4 0.2 1 23 405 428 405 428 0.94 6 23 6.7e-05 0.0053 17.8 3.9 1 23 435 457 435 457 0.98 7 23 0.024 1.9 9.7 1.0 1 23 464 486 464 486 0.98 8 23 0.00014 0.011 16.8 0.2 2 21 610 629 609 630 0.94 9 23 0.021 1.6 10.0 0.8 3 23 663 683 662 684 0.95 10 23 0.0017 0.14 13.3 0.1 3 23 691 711 689 711 0.96 11 23 4.6 3.7e+02 2.6 8.9 1 22 714 735 714 735 0.95 12 23 0.0024 0.19 12.9 0.2 1 23 748 771 748 771 0.94 13 23 0.00011 0.0091 17.1 0.5 1 23 777 799 777 799 0.96 14 23 5.9 4.7e+02 2.2 0.3 1 23 833 856 833 856 0.74 15 23 0.00042 0.034 15.3 1.2 1 21 982 1002 982 1003 0.92 16 23 0.56 45 5.4 0.1 1 23 1036 1059 1036 1059 0.92 17 23 0.0049 0.39 11.9 0.4 2 23 1064 1085 1063 1085 0.96 18 23 0.41 33 5.9 1.9 2 21 1089 1108 1089 1109 0.92 19 23 1.1e-05 0.00086 20.3 1.0 1 23 1135 1158 1135 1158 0.95 20 23 0.0016 0.13 13.5 0.4 1 23 1164 1186 1164 1186 0.92 21 23 1.4 1.1e+02 4.2 0.1 3 23 1194 1214 1192 1214 0.97 22 23 0.073 5.9 8.2 1.8 1 23 1220 1243 1220 1243 0.96 23 23 0.023 1.8 9.8 1.9 3 23 1251 1272 1249 1272 0.95
Sequence Information
- Coding Sequence
- ATGAACCGGCAAGTGGACATAAAAGCTTTGGTGTCTCACATAGTGAGAGGCGACGGTTTGGACAAATGCCGAATCTGCATGGGAGATACAACTGAAGGCCAGGTTTATCTCGGAGATACAGTAATGATGGATGGAGAGAGACCAGTTACGCTCGCTGAGTTACTGGAAATAGTCACAGGCATTGAGGTTCATTTGGAGGAGGACCTGCCAGCCGGGCTGTGCACCATCTGCACAGAGAGAGCCCTGGAGGCTGCAAACTTTCGAAATCAATGCCGGCAAGCAGAAAACCAATGGGACTCCACTCTACAACTACTAAACAACCTACCGATTAAAGATAAGCTCTTGAAAAAAATGTTCATCATAGTAGACAAGGATCAAATTATGGTGGTTGATAGTTTAAAAGGTTTAGATCATACTAAAATAGCAGCTGATAGACTCGCTTCAAAGTTGGTCGACTGCTCGCCCCTGCTGCCAAACAGGATATGCGGACGGTGTTCTTCCACCATTGCACCCACCATAAAACTCATTCTGTACCTGAAGGATGTGGACAGAAAGTGGAGAGAAGCATCAGACTACTTAGACCAACTAGATGTCAAAGACACCGTCAGAACTGTGTATATATCCATCGACGCTGAAGCCAAAGACCTAACCACTTATACAGAGAATGTCAAGCGAGAAGAAATAGGCATAGACAAAACGGACGTATTGAGATGCTTTAAGAAAAAGAAATCTCAACAGAACGCTGTCAGGAGGAGGAATGAATTGGAAAGAAAGTTGCGCAATTCGGAAATCGTCACAAGTTTGAAATGTCCGGATTGCGAGAAACCTTTTCTGTGCGTGTACAAGTTTAACATTCATATGAGGTATTACGGTAAACGCGCGTGCGTGCATTGCAGGAAAATGATTGAAGTTGAAAAACTTAAAGAACATTATGTTAGCCATGGAATTGATACGATGCAATGCGACATATGCTTTGACACTTTTAAGAAAATGGATGCGTTTTTGAAACACAAAGTAACTTACCATAGTAAAGGGCCGTATTTCTGTTACATCTGTAAACTGTCTTATCGGGATGCTCACCATCTTGCCTCGCATATGACCAGCAAGCATGAGCCAAGAATATGTCTTGGCTGCAATCGAAAATTCTCCAACGTATACTGTTTCAGAACACACTCTAGAAAATGTAGCAACGCCAAAAGAAAGGGAGGTATCTTCATTTGTGATATTTGTTCTAAAGTGTACAGTTCTAAATATGCTTTAAAAGTGCATTTAGAATACATACATATGAATAAAGAACATACACATCAGTGTGAACATTGTGGTAAAGTGTTCAACAGTGCTATTCATCTTTTGGAACACAGTAACACACACAACAGAGTTCCAGATAGATTCATTTGCAACATTTGTAACGTGCCAATGAGTACTAGACGGGGGTACCAAAGACACTACAAAAGGCACATGAAGAACCCTGACTACACTCCAAAGAGGCCCAGAGGTCCCAGCACTGTTAATGTCGTCGCCGAGGACTCCAACCTACCCCAAGGGCTGTGCCGAGCCTGTTCCGAAGACACCATCGCAGCGGCGCAGTTCAGGCAACTCAGCTTCGCCTCGCAGCAGCAGTGGGACCAAGCCGTCGATATACTCGCCCATGTCCACACCCCTGACGACCAAAACAAAACCCTCTACATCTTCTACGATGGTGAAAACACCGTTTTCAGGGAGGAAATTGAAGCCGTAACCAAAAATGACGTTGTCGTACAGCTTAACAAGAAACCTAAAAGGACTGTCAAAGTTAAAAGATCATATTCTAAATCGGCAGGCAAATGCCAATGTCCGGATTGCGGAAAAGACTTCCCGATAGCATATAACTTGAATGTACACTTGAAGAATACTATGAGAAGGGCGTGTGTTAGATGCGGTATGGTGTTGGAAAGGGAGAAACTGGCTGAACACCTGGCTAAAGTTCACGGGAAGCTGTTTGCTGACTGCGAAGTGTGTTACAAGCTTTTTGAAACCGAGGAAGGATTGAAACAGCATTATCTAAGTCATCATAGCCGGTTTTCTTTCGGCTGCCAGATTTGCGGGCGAGGGTATACGAATGATAGAGCACTGAGAGCGCATATGTACGCTCATACGCTGTTTCACTGCACGTCTTGCAAACTTAGCTTTGAAAATAGGCGGTGCTATAAGCACCACCAAAAGAAATGCCAGACCGATCATGAACTGACAACTGCGACACTGTTCGCCTGTGATTACTGCGGTAGCGTCTACAATAAGAAACCTTCGCTCCGCATTCACATAATACAAAAACATCTTAACGTACTCCCTTATGTGTGTGAAACGTGCGGCAAAAGAACCTCAACGCTAGCCCACTTACGATCCCACGAAGCTATTCATACAACGGAGCGGAAGTTGTACAAGTGCTCGTGTGGCGCTGAAATGCGTACAGAGTTAGGATATCACTTACATCAGAGAATCCACACGGGAGAGAAGCCTTACGAGTGCGAGGAATGTGGTGATAGGTTCCTCTCCGCTTCGAGACGTCTTGACCATGTTAAGAGAAGACACAGGAGCACTAAAGATATGCCTCATGGTTGTGAAATGTGTCAAGCGCGTTTCATAGAAGACGAGCCCCTCTGCCCGAACGGTATTTGTGCCACGTGCACCAGCCACGCCATCGCAGCTCAAGAGTTCAGATCCCTGGTAACAGACTCCTGCAAAATTTGGTCTTACGCGGTCCATCAGCTCGACACCATACCTCAAAGCGACACCCCTTCCGTCAAATCCCTCTGCGCCTTCCTGAGAGCAGACAATCTTAACATCCAAGTAGCCAAAGACTACACCAACAATGAAAAAACGACGCCTCTGTTCAGGTTAAAAACAAGAATGAACAGAAAGAAAAGCGAGGAGAGGCGGCCAAGGGTGCACAGGGCAGGGCCGCCCTGCAAATGTCCGGATTGCGACAAAGAATTTATAAGTCCCTTTTACCTAAACGTTCATTTCAAAAACAGCGGGCAGAAAGACGTTTGCATCACATGTGGCGCCGTGTTGCTTCGGGGGCAACAAATGAGGGATCATTTAGTTAAAGTGCATAGAGAGAACGCGTATTTGTGTAACGAATGTCCGGCTTTATTTTCTAATGAAATGGATGCCAAAAATCACGAGAAAAATGCCCACAAGACTGGCCTAACCTGCGGTGATTGTGGACGAACGTTCCTTAGAAACGCTTCCTTTGAATCCCATTCACAGATGCACGCTGTACGGACGTGTCGATCATGCGGCATCCAGTTCACTAATCGAGCGTGTTATAGGGAACATAGATCTACATGTGAACCAGATGCGAAACCGGACAGAGACTCAGTGCCACGGAATAGACGATCTAACATTCGAGACCCAGCTACATTCACGTGCGACTACTGCAAAAAAACATACACGTCACGTCCGCAATTGAAAAATCATATACTATGGATACATATGGATGTCAGGCCCCATCAGTGTCAGTGGTGCGGCAAAAGATTCTACACTCCTGCGCGCTTGGCTGAGCATAGTGTGGTTCATACAAGGGAGCGGAACTTCGGCTGTGACATTTGCGGTGCTAAATTAGTTTCCAAAATGGCTGCCGTGTACCATAGGAGACGGCATACGGGGGAGAAACCTTACAGATGTGAAGATTGTGGTGACTGCTTTATATCCGCTTCAAGAAGGACGGAGCACGCGAAGAGAAAGCATGGTAAAGGGCCAAGGGTTCACTGTATGCAATGTCCATCCACCTTTGTTAGGATACACGAACTAAAAAAGCATATTGAGAAGGCTCATAATTCTAATATTATTTCTTTGCTGGACGATTGA
- Protein Sequence
- MNRQVDIKALVSHIVRGDGLDKCRICMGDTTEGQVYLGDTVMMDGERPVTLAELLEIVTGIEVHLEEDLPAGLCTICTERALEAANFRNQCRQAENQWDSTLQLLNNLPIKDKLLKKMFIIVDKDQIMVVDSLKGLDHTKIAADRLASKLVDCSPLLPNRICGRCSSTIAPTIKLILYLKDVDRKWREASDYLDQLDVKDTVRTVYISIDAEAKDLTTYTENVKREEIGIDKTDVLRCFKKKKSQQNAVRRRNELERKLRNSEIVTSLKCPDCEKPFLCVYKFNIHMRYYGKRACVHCRKMIEVEKLKEHYVSHGIDTMQCDICFDTFKKMDAFLKHKVTYHSKGPYFCYICKLSYRDAHHLASHMTSKHEPRICLGCNRKFSNVYCFRTHSRKCSNAKRKGGIFICDICSKVYSSKYALKVHLEYIHMNKEHTHQCEHCGKVFNSAIHLLEHSNTHNRVPDRFICNICNVPMSTRRGYQRHYKRHMKNPDYTPKRPRGPSTVNVVAEDSNLPQGLCRACSEDTIAAAQFRQLSFASQQQWDQAVDILAHVHTPDDQNKTLYIFYDGENTVFREEIEAVTKNDVVVQLNKKPKRTVKVKRSYSKSAGKCQCPDCGKDFPIAYNLNVHLKNTMRRACVRCGMVLEREKLAEHLAKVHGKLFADCEVCYKLFETEEGLKQHYLSHHSRFSFGCQICGRGYTNDRALRAHMYAHTLFHCTSCKLSFENRRCYKHHQKKCQTDHELTTATLFACDYCGSVYNKKPSLRIHIIQKHLNVLPYVCETCGKRTSTLAHLRSHEAIHTTERKLYKCSCGAEMRTELGYHLHQRIHTGEKPYECEECGDRFLSASRRLDHVKRRHRSTKDMPHGCEMCQARFIEDEPLCPNGICATCTSHAIAAQEFRSLVTDSCKIWSYAVHQLDTIPQSDTPSVKSLCAFLRADNLNIQVAKDYTNNEKTTPLFRLKTRMNRKKSEERRPRVHRAGPPCKCPDCDKEFISPFYLNVHFKNSGQKDVCITCGAVLLRGQQMRDHLVKVHRENAYLCNECPALFSNEMDAKNHEKNAHKTGLTCGDCGRTFLRNASFESHSQMHAVRTCRSCGIQFTNRACYREHRSTCEPDAKPDRDSVPRNRRSNIRDPATFTCDYCKKTYTSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHSVVHTRERNFGCDICGAKLVSKMAAVYHRRRHTGEKPYRCEDCGDCFISASRRTEHAKRKHGKGPRVHCMQCPSTFVRIHELKKHIEKAHNSNIISLLDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00010417;
- 90% Identity
- iTF_00010417;
- 80% Identity
- -