Tvir024696.1
Basic Information
- Insect
- Tortrix viridana
- Gene Symbol
- arid5b
- Assembly
- GCA_963241965.1
- Location
- OY725198.1:6958088-6975832[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-12 1e-08 36.1 0.0 3 89 214 287 212 287 0.88
Sequence Information
- Coding Sequence
- ATGCAggacagtacagtcaagGATGAAGTCCTCGCGATCAACGACAAAGTGGTCCTTCGCGCCGAGGACCTGCTGTCGTGGGTGTGCGACGGCGCCGCGTGGGAGTGGGGGCTGCGCGCCGTGTGGCGCGGGGcctgcgcgccgcccgcgcagccgCGCCGCACGCAGCCGCtgcagcgcgcgcgcctcgACTTCAGCGACGTGGATCGAGAGAAGAGCGCGCTCGACGAGGACGGCGACAGCCCCGGCGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGCTAccgcgcgctgctggcgcggCTCGAGGGGCTGCAGGGCGACTGGCTGCGCGACAGCCTGGTGGCGGCGCTGGGCGGGTACGCCGCGCCCACGCGCAACACGCGCATACTCTACTGCAAGGACACCTTCGAGTATCCGGAGCTGGAGGGACACGAGTTTGTGTGCAACCAGCTGGCGCCGCGGCTGAAGGGCCGgccgcgcgggcgccgccgccgccgcgcctcgCGCCACGAGCCCGGGGGCTCCAGCGACAGCGAGGAGCGCCGCGCGCCCTCCCCCACCCCGCGGCGGCTGTCGCTTCGCAACGGCGCGCCGAAGTACAGCGACGACGAGGAGAGGGAGCAGAGCTCCGAGGACCGCGCGTTCCTGCAGCAGCTCAAGCAGTTCCACCGGGACCACAAGGAGCCGTTCAAGCTGGCGCACTCGCTCAAGGATTTGTCCCTGCGCTCGCTGTACCTGGCGgtgagcggcgcgggcggctaCGAGGCGGCGTGCCGCCACAAGCTGTGGCGCCAGATCCACGCGTCGCAGCCCAACACGGCGCGCCGCCACTACGAGAGGTTCCTCCTGCCCCTGGAGCGGCACGAGGCGCGCAGCTTCCTGCGGCCGCGGCACGGCGGCAAGCTGGACGCGCCCGTCACCATCGAGCTGCCCGACTCGCCGCGCGCCGAGCCTGCGCTCGCGCCGCGCGACTTCAGCGTCACCTCCAAGCCCGCCGAGGAGCTCAACAGGGAGTTCCTGGACTCGCTGCCGAAGGAGGAGAATAAGGTGAAGATAAGCGTGAAACCTGTGGAGAAGTTGCTAGAGGACACCAGGGAGGAGgcgccgcgcgccccgcgccccgcgccgccgccagGCTCCGCGGACTTGGGGAGCTTCATGAGCGTGTCCCCGCCTCAAGACCCGATCTCGAGCAACGCGCTGAGCTCGCTTACGACGCTGGTGAACGGCCACGCGCTGCCCAAAGACCAGAGCCGGCCGGCGGGGCGCAGCTCGCTGCGCGCCGTGCGCGTCAagccggcgcgcgccgcgcccgccgcgcccgcgcgcacGCCACCCATCCCGCTGGCGCGCGAGGCGGGCGCGTCGCCCCCGGGCGcaggggcgggcgcgggggcgggcgcgggcgcgggggcgggggcgggcggcgcggtcGCGCTCACCAACTTCGGCATCCACCACCCGCCGCCGCACAGCGACGAGGAGGTCGTCGAGGTCCCCTACAAGCCTAAAACGCCCGAGATCATCGACCTGGACGAGTACCCCGAGAGCCCCCAGGCcgtgaagaagaagaagctgGACATCCTGAAGGAGCGCGGGCTGGAGGTGACGGCGCTGCCGGCGCGCGGCTGGCCGCCGCTGCTGCtgccggcgccgcccgcgctgctggcgcgcgcgcaggtGCTGCAGCTGTACCGCGCGCTGCCGCCGGCCTACGCCAACGGCGCGCAGCCGCCCAAGGTCATCCAGGCCACCAGCGCCTTCGGCTCCTCCGGCCCTGAGCGAACCGTCTACGGAAACCCCAAAGACCCCTTCATGCCTCCCCCCCACGTGCTCCTGGGAGCGCCTCTACGCCCCCCCCGAAACGCGCCCAGCGCCACCCCCCCTAGAGACATCTTAGACTTGACGTGTAAGCCCGTGTCCCCTCCCATACAGAAGCCGGCTGTTGAAATAGTCAGGATACCCTCGGCCCCCTCCCCATCCAAACCCCCCACCCCCCAGAACTTAACAAAGAACTATACTCTAGTAGACGGCAAGGCGGTCGTCGGATCCAATTTAGAAATTACCCTGGTCAACCCAAAAACGCCGAGCAAATCGAAAGCGCAGCAAAAGCGCTCCTCGAACGGCAAATTCGTCTCAGGAAAAACGCCGACGCCACCACGAGACTACCCGAAATACGCGTCCCCAAAAAAACCACCGATAGTCGTTCCTAATTACCAAATAAACCCACGAGACGACGTGTCACCGACCAGTTCCACCGGCTCCAGAGATTCCCAAACGAATTTACACCAGAACTTGATTCAGAACACGTTCAAAAGCCAGAACAGCTTGCAGCAGATGATGGATATGCAGAAGAGCGTCCCCAGCATGCCGTTCATGGACCCGATGTACATGAACGCGCTGTACAGCAGCCTGGCGGGGTCCATGGACCAGCGGCAGCTGGCGCTGTACCGCGACCTGGTGGCCAGCCAGTTCCGCGGGTACTCGCTGCTCGGCGCCACGCCCACCACCAAGAACTGA
- Protein Sequence
- MQDSTVKDEVLAINDKVVLRAEDLLSWVCDGAAWEWGLRAVWRGACAPPAQPRRTQPLQRARLDFSDVDREKSALDEDGDSPGVVVFSYPRYCRYRALLARLEGLQGDWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNQLAPRLKGRPRGRRRRRASRHEPGGSSDSEERRAPSPTPRRLSLRNGAPKYSDDEEREQSSEDRAFLQQLKQFHRDHKEPFKLAHSLKDLSLRSLYLAVSGAGGYEAACRHKLWRQIHASQPNTARRHYERFLLPLERHEARSFLRPRHGGKLDAPVTIELPDSPRAEPALAPRDFSVTSKPAEELNREFLDSLPKEENKVKISVKPVEKLLEDTREEAPRAPRPAPPPGSADLGSFMSVSPPQDPISSNALSSLTTLVNGHALPKDQSRPAGRSSLRAVRVKPARAAPAAPARTPPIPLAREAGASPPGAGAGAGAGAGAGAGAGGAVALTNFGIHHPPPHSDEEVVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPARGWPPLLLPAPPALLARAQVLQLYRALPPAYANGAQPPKVIQATSAFGSSGPERTVYGNPKDPFMPPPHVLLGAPLRPPRNAPSATPPRDILDLTCKPVSPPIQKPAVEIVRIPSAPSPSKPPTPQNLTKNYTLVDGKAVVGSNLEITLVNPKTPSKSKAQQKRSSNGKFVSGKTPTPPRDYPKYASPKKPPIVVPNYQINPRDDVSPTSSTGSRDSQTNLHQNLIQNTFKSQNSLQQMMDMQKSVPSMPFMDPMYMNALYSSLAGSMDQRQLALYRDLVASQFRGYSLLGATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00008686; iTF_00009788;
- 90% Identity
- -
- 80% Identity
- -