Tvir000277.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tortrix viridana
Gene Symbol
jarid2b
Assembly
GCA_963241965.1
Location
OY725171.1:2376177-2411536[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-17 6.2e-14 52.8 0.0 6 88 561 640 558 641 0.92

Sequence Information

Coding Sequence
ATGGTGCTGCTGGAGAGACTGAGAAAAGACGAGATCCCCACTCCCCCCACGCCGTCCTTAGTAGTCCCGAGAAAACGCGCACCGAAACATAAGAATATCTCTAAGAACATGTGCTTACGCCCTCGCGCCAAAGCGGCGCCGAAGAGCGGGCGAAAGAGAAAAAATGTGGATCCTGTTAAAAGTCCCGGTCCCAGGAAGCGAGCCCGCAGTCACCGCGACGACCGGTCGTCGACAACTGAAGACGACATGCCCCTTCTGTTTTTACGGAATAAACCAAAACAAAAAACTGTCGAGAAGCAAATACCGAACGAGTCCAACTTCTCGTTCAAACGGCCTTCCAACCCCAGCGCCGTCCAGCTAAAGACGACACGTCGACGACGCAACAGGGACGTGACGCCGGTACCTTTGCCAACGCCAAGTAAAACGGCTAAACGCAATCAACTGCGGCGCTCCGCCCGCCTCCCGCACCCCACCGCGCCCCTCCCGGTCATCACGCGCATAGTCAAGAGGGCCCCGCGCGCTAAGCCGCAGCCAGCTAATAAACGCCCGTTGCTGAGCGGCAGTCCCCGCGGGGCCCCGAGCCCCACCAAGCGCCAGCCGAGTCCGGTCGCCGGGCCGTCTAGAGACCCCGTTCAGACCCCCGAACTCGGCTCGCTAAGACCTTGTAACGGCGGCGCAGAGACCGTCGACGAACCGCGCCCGTCCCGCTACCGACGTTTGTCGGCCGTGTTTTGCGACGCGAGCAAATTCGGGACTGTACAGGACGTAGTTCTGGCGGCTACCGACCAGAGCGCGGGGCTCCCCCGCCGGTGCCGCGCCTGCCGGCGGTGCGCCGTCGTGGACAAGATCATAAAGTTAACGATGCTGGTAAACCCGTTCGGCCTCAACCCCGAATCGGTGTACGATTTCAACAACGATAACGATAACGGCGCTTGCCCGTCGCTCGCCCGCTTGCGCGACATCCGCCGTCTCGCTCGTACCCAATCCGAAGAGATGCTTTTATTCCTCGACCACCTACCGAAAGCCCCGCAAATGATTAAACTCGCGTGCAGGAACGAGGCCGACAAGGAGTTCATTTCTTCAGCTTGTTTCGTGAACTGGGAAACTACAAACCCTACAAAACTTCCCGCTCTTATGGAGCAAGAGAGCCTCCTGGACGGTCTCCTGGAGGGGTTGGAGATGCGGGGCGGGGGGCAGGAGGCCCGTGAGCCTGAAGCGATTGTGCCCGTAGATCTGACGGCCGCGGATCAAGAAGATACAAGGGATACAAGGGAGGTTCCTGATGAACTGGAGGTTCCTGAAGGACAGGAGGTTCCCGATGAACAGCTTTATATTGAACAGgaaaaagaACCGGAACTAGCCGGAATAATTCAAAACGAAGACGATGATACGGATATGGAGTCGACCACTACTTCAGCTCGAGCGACTCCAGAGACCCGAGTCACGGGCCCTGGGTGCATTCTGACCGCACCAGTCTTCCGCCCTACTGAGGAAGAATTCCAGGACCCGATCGCATACTTTAATAAGATCGAGCCGACCGCAGTAAAGTATGGCCTCTGCAAGATTGTTCCGCCGGACAGCTTCAAGCCTCCGTGCAACATTAGCGACCATATCCGATTCGCTGTTATATACCAGTACATTTCGAAGCTTTATAACAGATGGGGGCCTGGGTCGCGAGAGCTGGCCGCCATCAAGGCCTATCTGAGAACGCAGAGCGTTGTCTTTAAACGAGCGCCCCTACTGGACTGCAGCGAGGTAAACCTGTCCCAGCTTTACCACTCCGTGGAACGAAACGGGGGACCCACTAAAGTGATCCAACGCAAGCGCTGGGGCAAAGTCGCAGAGGATTTGAAATTAAGTAAACTGCATAATCCTGAGAGGAAACTTGACCAGATATATATGCGGTACTTGCTGCCGTATGCTACCCTTTCCAACCAGGAGCGCCAAGATAAAATGTCCGCTGTCGAGTGCTGTTGGACTCAGAAGTACCAGCGTATGCTGCACCGAGCGCGCAACCCATTCCACAGGCAGAAGCGTATGTTGGGAGAGTCCTCGTCTTCAGAAGACGAGAGCGAGGATGGGGATACCGCGGGAGCTCTGTATGAGGCAGAGGACTGCATTGTACCAGGCCGGGTCATGAATCTAGCTACTTTCAAGAAGGTCGCGGCGTCTCTAATGGAGAATCGCTTCGAGTCGACCAAAAAGCCAGATGTTGAAGTCATCGAGAAGGCGTACTGGCGATCAGTGTTGCTTGGAACCGAACATATAGTGGCCAACACTGCGTCTATTGACACCGGAGAAGAGGGCTACGGGTTCCCCAAGGAAGAAAGCGCGGAGTATGGGACACATCCGTGGAACTTGAAGATGCTGGCTAGGAACCCGCAGAACGTGTTGCGGTTCCTCGGGCCAGTGCTGGGCGCGACTGTGCCCACGCTGCACCTCAGCATGTTGTACAGCACGTCTTGTTGGCACCGCGACCCCCACGGCCTGCCGTGGACCGAGTTCATGCACGCTGGCACTGAAAAGATATGGTATGGAATCCCAAGCGCGCAAAGCAATAACTTCCGTCGCGCAGTCGAAACGCTCTGCCCGGCGTACTGTCAAAACAAATCGATATGGCTGGCGTCCGACATCGCCATGATACCGCCGAAGATCCTGGCTGCCCACGACGTGAAGCTGTCCCGAGCGGTCCAGCACCCGGGGGAATATGTACTGGTGTTCCCTGAAGCCCATTCCTGCTCTATAACTACGGGGTATTGCGTGTCGGAGAGCGTGTATTTCGCGACCGACAACTGGCTTGAGGTGGTGTACAAGCTGTTCCAGGAGCTGCGCAACAGCTGCGAGCCAACCATGTTCTCGCTAGAACAGTTACTGATAAACGGCAGTCGCGACGAGGAGGCGCCGCGCCGCACGTTGCTGCCCATCTGCTCCGTGCTCGGCACGCTGATCAGTGCGGAGCTGGAGCACAGGCGGGTGCTTGAGCTCAAGGGGCTCGAGGTGCGAGAGGTGGCCGCGGCGCCTCCGTCGACGCGCGCCTGGAACCCGCGCGACCAGGACGAATGCGAGTTCTGCCGGTGCACGCTGTACCTGTCCAAGGTGATGGGGTTGTTGGGCAGAAAAGCCGTGTTTTGCCCGGAGCACGCGATCCGCCTCCTGGAAACGAGGAAGTTCAAGAACATGGACGTCAGTAAGGTGGACTTCATCACGACCTACCCCACCAACGTGCTGGAGCAGATGATAGACGCTCTCGAGGAACGGGTCTCTCAGCGGTAA
Protein Sequence
MVLLERLRKDEIPTPPTPSLVVPRKRAPKHKNISKNMCLRPRAKAAPKSGRKRKNVDPVKSPGPRKRARSHRDDRSSTTEDDMPLLFLRNKPKQKTVEKQIPNESNFSFKRPSNPSAVQLKTTRRRRNRDVTPVPLPTPSKTAKRNQLRRSARLPHPTAPLPVITRIVKRAPRAKPQPANKRPLLSGSPRGAPSPTKRQPSPVAGPSRDPVQTPELGSLRPCNGGAETVDEPRPSRYRRLSAVFCDASKFGTVQDVVLAATDQSAGLPRRCRACRRCAVVDKIIKLTMLVNPFGLNPESVYDFNNDNDNGACPSLARLRDIRRLARTQSEEMLLFLDHLPKAPQMIKLACRNEADKEFISSACFVNWETTNPTKLPALMEQESLLDGLLEGLEMRGGGQEAREPEAIVPVDLTAADQEDTRDTREVPDELEVPEGQEVPDEQLYIEQEKEPELAGIIQNEDDDTDMESTTTSARATPETRVTGPGCILTAPVFRPTEEEFQDPIAYFNKIEPTAVKYGLCKIVPPDSFKPPCNISDHIRFAVIYQYISKLYNRWGPGSRELAAIKAYLRTQSVVFKRAPLLDCSEVNLSQLYHSVERNGGPTKVIQRKRWGKVAEDLKLSKLHNPERKLDQIYMRYLLPYATLSNQERQDKMSAVECCWTQKYQRMLHRARNPFHRQKRMLGESSSSEDESEDGDTAGALYEAEDCIVPGRVMNLATFKKVAASLMENRFESTKKPDVEVIEKAYWRSVLLGTEHIVANTASIDTGEEGYGFPKEESAEYGTHPWNLKMLARNPQNVLRFLGPVLGATVPTLHLSMLYSTSCWHRDPHGLPWTEFMHAGTEKIWYGIPSAQSNNFRRAVETLCPAYCQNKSIWLASDIAMIPPKILAAHDVKLSRAVQHPGEYVLVFPEAHSCSITTGYCVSESVYFATDNWLEVVYKLFQELRNSCEPTMFSLEQLLINGSRDEEAPRRTLLPICSVLGTLISAELEHRRVLELKGLEVREVAAAPPSTRAWNPRDQDECEFCRCTLYLSKVMGLLGRKAVFCPEHAIRLLETRKFKNMDVSKVDFITTYPTNVLEQMIDALEERVSQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-