Talt000883.1
Basic Information
- Insect
- Tortricodes alternella
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_947859335.1
- Location
- OX401975.1:1175641-1178118[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1 2.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 21 0.0052 1.2e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 21 1.6e-07 0.0035 17.6 15.9 3 19 186 202 185 202 0.95 4 21 0.33 7.4e+03 -2.6 0.8 6 10 227 231 226 231 0.89 5 21 6e-08 0.0013 19.0 13.2 1 19 237 255 237 255 0.93 6 21 1 2.2e+04 -4.4 1.9 6 10 280 284 279 284 0.81 7 21 4.6e-10 1e-05 25.7 12.0 1 19 290 308 290 308 0.99 8 21 4.9e-08 0.0011 19.3 17.3 3 19 345 361 337 361 0.86 9 21 0.1 2.3e+03 -0.9 0.8 1 5 370 374 370 379 0.79 10 21 1 2.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 11 21 3e-06 0.067 13.5 18.3 1 18 395 412 395 413 0.97 12 21 7.2e-09 0.00016 21.9 17.3 1 19 422 440 422 440 0.99 13 21 4.1e-05 0.91 9.9 5.2 9 19 488 498 486 498 0.89 14 21 0.0052 1.2e+02 3.2 4.6 4 11 510 517 508 518 0.88 15 21 0.16 3.5e+03 -1.5 3.5 14 18 547 551 547 552 0.87 16 21 0.045 1e+03 0.2 0.3 7 12 567 572 565 579 0.83 17 21 0.00059 13 6.2 6.6 1 11 588 598 582 599 0.91 18 21 0.42 9.4e+03 -2.9 1.5 15 18 613 616 612 617 0.82 19 21 0.0006 13 6.2 12.6 3 18 629 645 628 646 0.87 20 21 1 2.2e+04 -6.5 3.4 9 13 652 656 652 656 0.71 21 21 8.3e-06 0.18 12.1 14.1 1 17 687 705 687 707 0.85
Sequence Information
- Coding Sequence
- ATGGCCCGGAGATACCGCGACGCGGCTGCAAAATTGCAGCAAAATGTGCAGAAGCATTTGAAAGGGATGAAAGAGCTTTCATCCTCTGAAGATGAGGAACCTTACGAATCCAGCGTGCTGGAGGGGGTGCTGCAGAGTTATCGGAACGGCGGTGGTGACACGCACATGCTCAACCGCACAAGGAACATGCTAGAAGAGGTGATAAGCGGCCGGTCCGTGACCTGCCTCATCTGTATAGGATCAATTAAACGCGCCCATGCGATCTGGACCTGCGAGCACTGCCACTCGTATTTCCACCTCTCTTGCATTCAGAAGTGGTCCAATGACAGCATAAGCCTCCGCAGCGAGGAGAACCACGGTCCTATCGCAGTGTTTGTGCCAAAGAAAATCGAGTGGTGCTGCCCTAAATGCCGGAATTCGTATTGTAAAGAAGAGATCCCGCGAAAGTACCGCTGCTTTTGCGGCAAGACTGATGACCCTGCTTTACATCCCTGGTTGATCCCACATACCTGTGGGGAAGTGTGTGGAAAAAGATTGTCAACTGGAGACAATTGCAAGCACAAGTGCTTACTTTTATGCCATCCCGGTCCATGCCCTCCTTGCCCTCAAACTGTTAATGGAGTATGTTTCTGTGAAAAGGAAAGGAAAAGGGTCCGCTGTAGCGCAGCCAAGTGGTCTTGTAATCAGCTATGCAAGAGGTTACTCTCATGTAACTCCCACAAATGTGAGACCATCTGCCATCAAGGTGCCTGTCCTCCTTGCAGTTACACCAGTGTGCAGCCATGCCTATGTGGTGCTGGTAAAGTCAAAAGACCTTGCAATGATCCTGTGTGGCAATGCCAGAAGTCATGTAACAAGCCATTTGCCTGCGGATATCACAAATGTGAAAGAATATGTCATTCTGGTGACTGCGGTGACTGCCCTTACTCTGGCTTGAGGTGTTGTCCTTGTGGAGCAAACCAACGCTTTGTTCAATGTCCTGATGTTATGGAAACATGTGTCGGTACTTGTGGAAAGACACAAGATTATTGTGAACATACTTGTCCAGAAAAATGTCATAAGGGCCCTTGTCCTCCTTGTCAAGTGCTGATAGAAAAGCAGTGCCAATGTGGTACCCATACAAGGTCCTTACCATGTAGTAAAGAATATAAATGTGAGACAAAGTGCAGAGGTATCAGACCTTGTGGGAAACATGGCTGTGCCCGTAAATGCTGCAATGGCAACTGTCCTCCTTGTGAAAAAGTGTGCGACAAGCCTCTTCAGTGCGGCCGACACAAATGCACAACTGTCTGCCATCATGGTCCATGCTACCCGTGTCCCTTAGAATCGAAAGTAACTTGCCGTTGCAAAGAAACTTATATCGCTGTTCCATGTGGCAGAGAAAAGCACACCAAACCACCAAAATGTAATCTTCCTTGCAAAATTAAATACAAATGCGGTCATGTTGAAGAAAACAAGCATTCTTGCCATTTTGGTGACTGTCCCCCTTGTAAGGCGATATGCCACAAAGTTTATGAAAAATGTGATCATGATTGTAAGGCGGTCTGCCACGCGTACGTAACAGTAGTCTTTAAACAGGTGGATAAACCTGCAACGCCTTGGGAAGTAAAACCGCCAAAGACCAAAATAATGACACTTGATTGTCCACCATGCGAAATGCCCATCTCTATCATTTGCTTTGGAGAACATGAGACCGGGGAGCAGCCATGTCACTCAGCGGCGCGCCGTCCCTGCGGCCGCGAGTGCGGTCGCCAACTCTCCTGCACCAACCACAAATGCAAGCTCCTCTGCCACTTATACGCACCGGATCCCGACTATCCCAATATACCTTCTTCGTGTGAGCCTTGCAACAGAGAATGCTTGGTTCCAAGACCAGATAGATGCAACCATAAATGTTTAAAAGGTGCCTGCCACCCTGGTCTGTGTCCCTCCTGTGAGGTCATGGAAAGAATTCCGTGTCACTGCGGTGTCACAGAACTGTATTTACGCTGCCGTGAACTATCAGCTGCAACTGAAGAGATGCTGTCATGTAAGCAACAGTGTCCTAAGAACTTGGAGTGTGGTCACCGATGCAGGAACCTGTGTCACCCCGGTGCATGTGGGCATGATCAAGTCTGCACTAAGAAAACTAAAGTGCACTGCTTGTGTGGGAATCTTAAGAAGGATGCACCATGCAGTGTAGTAAGAAGAGGTGAGGGAAAACCTGCTTGTGATGTGACTTGTGAAGCAAAACGCATTGCGATGGAGTTAGAGAGGGAGAACGAAGAGAAGAGAAGAAAGGAGATTGAAGAAGAAAAAAATAAAAAGGAATTAGCTGAGTATGAATGGAAACTGAGCGGAAAGAAAAAGAAATACAAGGAAAAGAAGGTTGTGACTAGCATGGATAAAAGGAATTTCCTGCAAAAATATTGGATTCATATTATATCTATTATAGTGGTTCTAATAGCAGCTGTGTATTTTATATTTTGTGTGGAATGA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKGMKELSSSEDEEPYESSVLEGVLQSYRNGGGDTHMLNRTRNMLEEVISGRSVTCLICIGSIKRAHAIWTCEHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRNSYCKEEIPRKYRCFCGKTDDPALHPWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCEKERKRVRCSAAKWSCNQLCKRLLSCNSHKCETICHQGACPPCSYTSVQPCLCGAGKVKRPCNDPVWQCQKSCNKPFACGYHKCERICHSGDCGDCPYSGLRCCPCGANQRFVQCPDVMETCVGTCGKTQDYCEHTCPEKCHKGPCPPCQVLIEKQCQCGTHTRSLPCSKEYKCETKCRGIRPCGKHGCARKCCNGNCPPCEKVCDKPLQCGRHKCTTVCHHGPCYPCPLESKVTCRCKETYIAVPCGREKHTKPPKCNLPCKIKYKCGHVEENKHSCHFGDCPPCKAICHKVYEKCDHDCKAVCHAYVTVVFKQVDKPATPWEVKPPKTKIMTLDCPPCEMPISIICFGEHETGEQPCHSAARRPCGRECGRQLSCTNHKCKLLCHLYAPDPDYPNIPSSCEPCNRECLVPRPDRCNHKCLKGACHPGLCPSCEVMERIPCHCGVTELYLRCRELSAATEEMLSCKQQCPKNLECGHRCRNLCHPGACGHDQVCTKKTKVHCLCGNLKKDAPCSVVRRGEGKPACDVTCEAKRIAMELERENEEKRRKEIEEEKNKKELAEYEWKLSGKKKKYKEKKVVTSMDKRNFLQKYWIHIISIIVVLIAAVYFIFCVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023391;
- 90% Identity
- -
- 80% Identity
- -