Basic Information

Insect: Tortricodes alternella
Gene Symbol: THAP3
Assembly: GCA_947859335.1
Location: OX401971.1:24843377-24861900[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.027 1.7 9.6 0.7 1 23 400 423 400 423 0.93

2 10 0.42 27 5.8 0.2 1 23 427 449 427 449 0.92

3 10 0.0046 0.29 12.0 1.0 1 23 454 477 454 477 0.98

4 10 0.003 0.19 12.5 0.7 1 23 481 504 481 504 0.96

5 10 7.5 4.8e+02 1.9 0.1 2 21 517 536 517 537 0.85

6 10 0.14 9.1 7.3 0.2 2 23 594 616 593 616 0.96

7 10 0.01 0.65 10.9 0.5 2 20 632 650 631 653 0.92

8 10 6e-06 0.00039 21.0 2.5 1 23 659 681 659 681 0.99

9 10 0.00026 0.016 15.9 2.8 1 23 688 710 688 710 0.98

10 10 0.00011 0.0067 17.1 1.0 1 23 716 739 716 739 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.027	1.7	9.6	0.7	1	23	400	423	400	423	0.93
2	10	0.42	27	5.8	0.2	1	23	427	449	427	449	0.92
3	10	0.0046	0.29	12.0	1.0	1	23	454	477	454	477	0.98
4	10	0.003	0.19	12.5	0.7	1	23	481	504	481	504	0.96
5	10	7.5	4.8e+02	1.9	0.1	2	21	517	536	517	537	0.85
6	10	0.14	9.1	7.3	0.2	2	23	594	616	593	616	0.96
7	10	0.01	0.65	10.9	0.5	2	20	632	650	631	653	0.92
8	10	6e-06	0.00039	21.0	2.5	1	23	659	681	659	681	0.99
9	10	0.00026	0.016	15.9	2.8	1	23	688	710	688	710	0.98
10	10	0.00011	0.0067	17.1	1.0	1	23	716	739	716	739	0.93

Sequence Information

Coding Sequence: ATGCGGTGCAGTGTACATAACTGTTCAAACGATACCAAACGAACAACTAAAAGCCATGGAATCACATTTCACATGTTTCCCAAAGAGCCAAATCTCCGGAACACCTGGATGGAAGCCCTGGGCATGTCAGATTGGGAGCCTAAAGACCGAAGCACAATATGCTCCGAGCATTTCAGGAATGAAGACTTCTATGAGACCCGTTGTGGGTTACGGAAGATCAAGAATGGGGCAGTGCCAGTTGTTGCTCAAGATGTAGCAGATGACTTGGATGCACCAGCAGCTTTGAGAGTGTGCCGAATATGCCTGGCGACGGACAGCAAGATGTACAACATACGGGACTTCAAGCTGGAGCGAGCTTACACTGAAGTCAGCGGGATGATTCTATGTGAGGAGGACAAGCTACCGCAGAAACTTTGTTGGGAATGTACGTCGCGGCTGCTCACCGCGGCGCGCTTCAAAAGCAAAGTGCTGAAGAGTCACGATCTTCTGACAGGCTTGCCTCACGCCAGTCTATATATCACAATACGCGACATCCGCTCAATCAACCGCCGCCAGAACCAGCTCAGATCACAACTCTCCCATCAATACTTTGACCCGAACAACTACCACATACATATTAAAGACGACCAAATTGTGATAAAATCTGAGATAAAAGAAATAGACGATTATGAGGAAAAAGTACCGCCCATAGTTGAAGTGGAACTAATAAAAGATGAGAAAAGCAGTAACGAATTGTTTTTCAATGAGTATAATGATAATTTAGATTTTGATACTAATGAGAATTATGACGGTAATGAACAGATCGATGGCAATGAGCCGAGTGGCGATGGTAATGACAGCGACGATAAACTGTTGAGTGAAGTGTACGTGAAGAAGAGGAAACTGAAGAAAAAAGTTAAGGTGAAAAAGAAAGAGAAGGTCGTTAGGAAGAGGGAGGAGGAAGATAGTCCGACCACTACTATGGATAAGTACAAAGTGTCCGACGTAAAACGCCGTAAACAAACGGACGGTCTGGACGAGTCGCTGTTCACGATAACGACGCTGAGCTACGAGGAGCAGATCGCGGAGATCCAGAAGCGGCAGGAGACGAGCAACTACCGCAGCGCGCCGTACAAGTGCGCCGTGTGCTACCGCGGGTTCCTCGTGCGGGACCGGTACGACGCCCACGTCGTCCGGCACAGTGAGCAATCCGGTGCGTACGAGTGCTTCATTTGCAAGAGCCGGTTGAAGAGCGCACGGGCTCTGCGCAAGCACCTCACTGCGCAGCACACGGAGAAGTTCAGCTGCAAGGGGTGCCCGTTCGTTACCAGGAACAGAGGCGTTGCCCGGGAGCATGAGAAGTGGCACGCCGGGACCAAGTACCAGTGTCCGCACTGCCCCAGCGAATTTGACAAGCTGACCACATATATGGGGCACATAAGGATAAAACACGTGTCTGACTTTGTATGCGAACTGTGCGGATACACTTTCGTCAGCAAGAAGGGAATCGACGTGCACAAGAAAAAGAAACACCGGCTCGCCGATAAGACGGTGACGTTAGAAGGACCGTACTGTGAGACGTGTGAAGTCAGGTTCGTGTCGGAGGAAGCGCACGCGCGGCACCTGAAGCTGTCTTCACGGCACAGCAGTGACAGTGATCCGAATAGAATCAGAAACGACTCGCAGAGCATAAACGCCGACAAGAACGGGCGCGTGGTGCGCAAGGTGGAAAGGAGACCGATGATACACCCGCGCGACGCGGCCGACAAGGACAGCATGTGTGAAACCGGGGGGCCCGTGTCTTGCGAACAGTGCGGCATACAACTCCGGGACTTGCGTTTGTACGCGCAGCACTTCCGGCGCGCGCACCCCGACAAGAATCGAACCAAGTACCCCGCCATGAAGACGCCGTGCATGTGCGAGCAGTGCGGACGGATATTCCAGAGCATGGCGCTCCTGAAAGACCACATGTGGGTGCACACCGGCGAGAAACGTTTCAAATGCGACCGCTGCGACAAGAGCTTCACGCAGAAGACCAACCTGGTGTTCCACATGCGCGTGCACAGCGCCACGCGGCCCAGCTACGAGTGCCCGCTGTGCGGCAAGCACTTTGCCTTCTTCAACAACCGCAGGAGGCATATGTTTATCCATACCGGCCTGAAACCGTTCAAATGCGAGTCGTGCGGCAAGAGCTTCACGACGTCCGGCGAGCAGCGCGCGCACGTCGAGCACGTGCACCTCAAGAAGCCCTGGCCCCGGCGCCAGCGCCGCGAGCCCGAGCCACAGCCCTGGAAGTGCACCGAGCCCGCCGAGGACTAG
Protein Sequence: MRCSVHNCSNDTKRTTKSHGITFHMFPKEPNLRNTWMEALGMSDWEPKDRSTICSEHFRNEDFYETRCGLRKIKNGAVPVVAQDVADDLDAPAALRVCRICLATDSKMYNIRDFKLERAYTEVSGMILCEEDKLPQKLCWECTSRLLTAARFKSKVLKSHDLLTGLPHASLYITIRDIRSINRRQNQLRSQLSHQYFDPNNYHIHIKDDQIVIKSEIKEIDDYEEKVPPIVEVELIKDEKSSNELFFNEYNDNLDFDTNENYDGNEQIDGNEPSGDGNDSDDKLLSEVYVKKRKLKKKVKVKKKEKVVRKREEEDSPTTTMDKYKVSDVKRRKQTDGLDESLFTITTLSYEEQIAEIQKRQETSNYRSAPYKCAVCYRGFLVRDRYDAHVVRHSEQSGAYECFICKSRLKSARALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKTVTLEGPYCETCEVRFVSEEAHARHLKLSSRHSSDSDPNRIRNDSQSINADKNGRVVRKVERRPMIHPRDAADKDSMCETGGPVSCEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHMRVHSATRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCESCGKSFTTSGEQRAHVEHVHLKKPWPRRQRREPEPQPWKCTEPAED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325875;
90% Identity: iTF_01463319;
80% Identity: iTF_01463319;