Talt014810.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tortricodes alternella
Gene Symbol
Zfy1
Assembly
GCA_947859335.1
Location
OX401972.1:8712086-8721928[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.35 22 6.1 0.9 2 10 173 181 172 192 0.90
2 24 0.0056 0.36 11.7 1.5 2 23 224 246 223 246 0.95
3 24 0.0012 0.08 13.7 4.6 1 23 251 274 251 274 0.96
4 24 0.5 32 5.6 2.6 3 21 279 297 278 298 0.93
5 24 2.6e-05 0.0017 19.0 0.2 1 23 309 332 309 332 0.94
6 24 4.5e-05 0.0029 18.3 4.8 1 23 339 361 339 361 0.98
7 24 0.006 0.38 11.6 0.5 1 23 368 390 368 390 0.97
8 24 0.018 1.1 10.1 2.3 1 23 416 439 416 439 0.97
9 24 2.3e-05 0.0015 19.2 0.2 2 21 549 568 548 569 0.94
10 24 0.0053 0.34 11.8 0.9 3 23 602 622 601 623 0.95
11 24 0.0016 0.1 13.4 0.1 3 23 630 650 628 650 0.96
12 24 3.3 2.1e+02 3.0 7.7 1 22 653 674 653 674 0.94
13 24 0.00079 0.051 14.4 0.4 1 23 686 709 686 709 0.95
14 24 0.00014 0.0091 16.7 1.0 1 23 715 737 715 737 0.96
15 24 2.3 1.5e+02 3.5 0.3 1 23 771 794 771 794 0.87
16 24 0.00028 0.018 15.8 0.9 2 21 921 940 920 941 0.92
17 24 0.6 38 5.3 0.1 3 23 976 997 975 997 0.96
18 24 0.0043 0.27 12.1 0.4 2 23 1002 1023 1001 1023 0.96
19 24 0.94 60 4.7 1.5 2 21 1027 1046 1027 1047 0.91
20 24 1.2e-05 0.00077 20.1 2.1 1 23 1073 1096 1073 1096 0.95
21 24 0.0014 0.092 13.5 0.4 1 23 1102 1124 1102 1124 0.92
22 24 1.3 83 4.2 0.1 3 23 1132 1152 1130 1152 0.97
23 24 0.17 11 7.0 1.8 1 23 1158 1181 1158 1181 0.94
24 24 0.0093 0.59 11.0 1.5 3 23 1189 1210 1187 1210 0.95

Sequence Information

Coding Sequence
ATGTATCTGGTGACTACTATAGTCCCCGGACTCCTCGGCGGCTTCGCTGTTCCTGACTACGGTAGCGATCATGGTGACCGCAGGGCAGGGGGTGCTAAGCATCCCCGGCAGAGGCCCACACAGAAACGCGACAATAAGAAATTTTTCTGGAAAAAAtctaattggtctGTGGAGTCTTCGCCGCTGCTGCCTAACCGAATATGCGGAGGCTGCGTCAACGGAATCGCTCCCACGATTAAGCTCATAGAATTCCTCAGAGATGTCAACAGAAAGTGGAGGGAGGCTGCAGAGTACATTGACCAGCTCGACGTCAAAGACAACGTCAAAACTGCTTACATAGTCATAGATGCTGAGGGCAACGACTTCAGGAAGTACACAGAAAACATCCAGCGACAGAGCACTGATATAACTCAGGTGTTCAAAAGGTTCAAGAAGAGGAAGTCGCAACAGGACTCCACTAAAAGAAGGAACGAGTTGGAGAGAAAGTTGCGCGACTCGGAAATCTCTACGACTCTAAAATGTCCAGAGTGCGACAAATCTTTTCTTTGTGTGAATAAATTCAACTTGCATATGCGGTATTATGATAAGCGCGCGTGCGTGTATTGCCGGCATATGATCAAAGTTGATAAGCTGAAAGAACACTACGCTGAACACGGAGTTGAGACCATGCAGTGTGATATATGTTTCGAAACTTTCAAGAAGAATGATACGTATCTGAAGCATAAAGTCACGTATCACAGCAAAGGCCCGTATTTCTGTTACATCTGCAAGCAATCTTACCGGGATCCCCATCACCTAGCGTCGCATATGACTAGCAAGCACGAGCCGAGAATCTGTCTCGGCTGCAACCAAAAATTCACCAACGTCTACTGCTTCAGAACGCACTCTAGAAAATGCAACAACGCCAAGCGGAAGGGAGGCGTTTTCATTTGTGACATATGCTCTAAAGTCTATAGCTCTAAATACGCTTTGAAAGCACATTTAGAGTACATACATATGAATAAAGAGCACACTCATCAGTGTGAGCATTGCGGCAAAGTGTTCAATAGCGCTGTCCATCTTTTTGAACACAGTAACACACATAACAGGGTTCCCGATAGATTCGTGTGCAAGATTTGTGGTATGCCGATGAGTACAAGACGCGGTTACCAAAGGCATACTGAACGTCATTTGAAGAACCCTAATTACAAGCCAAGAAGGCCGAGAGTGCCCAATGCTCCTCATGTTCCGAAGATCAAGAAGGAATTCCACTGTGAATTTTGTGATGAAAAGTACCGTCTAAGGGTCGACCTCCATGCTCATCTGATTACAGACCATGACATGATTACTGTCGCCGAGGATGCTGGCTTACCGCAAGGCCTGTGCCGAGCCTGTTCCGAGGATACGATAGCGGCCGCTCACTTCCGTCAGCTCAGCTTCGTCTCTCACCAGCACTGGAACCAAGCTGTAGCCTCCATAATCCAGATACAAGACCCTGAGGACGGAAACCAGACGATGTACGTGTTCTACAATGGCGAACACACCGTCGTGAAGGAGGAGGCAGGAAAAGCCGGCACCACAAACGAAGTCGTGGAACTGCTCAACCAGAAACCCGTCAAAAAGGCAGTGAAAGTGAAAAGAGCTTATACGAGATCGGGGAAGTGTCAGTGTCCGGACTGCGGGAAGGAGTTCCCGGTGGCGTATAATTTAAATGTCCATTTGAAGAACACAATGAAACGAGCGTGTATAAAATGCGGTGTGGTTCTAGAGAGAGAAAAGCTGGCTGCACACTTGGCTAAAGTACACGGACAGCTTTATTCTGATTGCGCGGTGTGTTTCAAGCTATTTGCGAACAACGAAGATCTCTCACAACATTACATGACGCATCACAGTAGAGTGTCATTCGGATGCCAGATCTGTGGGCGCGGTTATACCAACGACAGGGCGCTGAGAGCGCACATGTACGCCCATACGCTTTTCCACTGCGTGTCCTGCAATTTGAGCTTCGAGAATCGACGCTGTTTCAAGCACCATCAGAAAAAATGCCAATCCACACACAAACCGACCTCTACGAACTTCACTTGTGACTATTGCGGGAGCGTATACAACAAGAAACCATCGTTACGCATCCATATAATACAAAAGCACCTCAACGTCCTGCCTTATGTCTGCGAGACTTGCGGCAAAAGGACCTCAACACTCGCACACTTGCGTTCGCACGAAACTATACACACTACAGAAAGGAAACTATATAAGTGTGCGTGTGGTGCGGAAATGCGGACGGAGTTGGGATACCATCTCCACCAAAGAATCCATACGGGGGAGAAGCCTTATGAATGCGAGGAATGTGGTGATAGATTCCTCTCAGCATCAAGACGGCTAGACCACATCAAAAGACGGCATAGGAGCACTAAAGAAATGCCGCACGGTTGTGCGATGTGCCAAGCGCGTTTCATAACTGACGAGCCACTCTGCCCGAGTGGCATTTGCGCCGCCTGCGCAAGTCAGGCCATCGCAGCCCAAGAGTTCAGATCCCTGGTCACTGATTCCTGCAAGATATGGTCGTACGCGGTCTATCAACTCGACAACATACCTCTGCACGACGCTCCCGCCGTCAAATCCCTCTGCGCGTTCCTTAGACCTGACAATTTAAACATCCAAGTTGCCAGAGATTACACGCATAACGACAAAACGACGCCACTGATCAGGCTTAAAACCAGAATGAACAAGAAGAAAAATGATGAGAGAAAACCCAGAGCTCACAGATCCGGACCGCCCTGCAAATGCACGGATTGCGGCAAAGAGTTCATAAGTCCGTATTATTTAGCAGTTCATTTCAAAAATAGCGGACAGAAAGATGCCTGCAATACTTGCGGAATCGTTTTATTACGCGGAAAGCAAATGAGAGACCATCTGGTTAAAGTGCATAGGGAAGACGCGCAATTGTGCAAGGAGTGCCCGGCTATTTTTACTAATGACATTGACGCTAAAAACCATGAGAAAAAAGCGCATAAGGACGGTTTAACTTGTGGTGACTGCGGACGTACATTCCTTAGAAGCGCTTCGTTCGAATCCCATTCGCAAATGCACGCCGTACGGACGTGTAGAGCTTGCGGGATCCAGTTTACCAACCGAGCGTGTTACAGGGAGCACAGATCGAAGTGCGAGCCGGACGCCAAACCGGACAGAGACACGATACCCCGGAATAGGCGATCAAACATACGCGATCCGGCCACGTTCACCTGCGATTACTGCCACAAGACCTACACGTCCCGACCACAATTGAAGAACCATATCTTATGGATACACATGGACGTCAGACCGCACCAGTGCCAGTGGTGTGGCAAGCGGTTTTACACTCCCGCGCGTTTGGCCGAGCATAGCGTCGTCCACACGCGGGAGCGGAACTTCGGTTGCGATATCTGTGGTGCGAAACTGGTCTCCAAAATGGCGGCTGTGTACCATAGACGAAGGCATACCGGTGAAAAGCCGTACCGGTGTGAGGATTGCGGGGACTGTTTCATTTCTGCGTCAAGGAGGTCGGAGCATGCTAAGAGAAAGCATGGCAAGGGTCCGAGGGTACACTGCATGGAATGCCCCTCGACGTTTGTTAGGATACATGAACTGAAAAAGCACATTGAGAAAGCGCATAGCAAGAACAGTGTTATTTCCTTGTTGGACGACGATTGA
Protein Sequence
MYLVTTIVPGLLGGFAVPDYGSDHGDRRAGGAKHPRQRPTQKRDNKKFFWKKSNWSVESSPLLPNRICGGCVNGIAPTIKLIEFLRDVNRKWREAAEYIDQLDVKDNVKTAYIVIDAEGNDFRKYTENIQRQSTDITQVFKRFKKRKSQQDSTKRRNELERKLRDSEISTTLKCPECDKSFLCVNKFNLHMRYYDKRACVYCRHMIKVDKLKEHYAEHGVETMQCDICFETFKKNDTYLKHKVTYHSKGPYFCYICKQSYRDPHHLASHMTSKHEPRICLGCNQKFTNVYCFRTHSRKCNNAKRKGGVFICDICSKVYSSKYALKAHLEYIHMNKEHTHQCEHCGKVFNSAVHLFEHSNTHNRVPDRFVCKICGMPMSTRRGYQRHTERHLKNPNYKPRRPRVPNAPHVPKIKKEFHCEFCDEKYRLRVDLHAHLITDHDMITVAEDAGLPQGLCRACSEDTIAAAHFRQLSFVSHQHWNQAVASIIQIQDPEDGNQTMYVFYNGEHTVVKEEAGKAGTTNEVVELLNQKPVKKAVKVKRAYTRSGKCQCPDCGKEFPVAYNLNVHLKNTMKRACIKCGVVLEREKLAAHLAKVHGQLYSDCAVCFKLFANNEDLSQHYMTHHSRVSFGCQICGRGYTNDRALRAHMYAHTLFHCVSCNLSFENRRCFKHHQKKCQSTHKPTSTNFTCDYCGSVYNKKPSLRIHIIQKHLNVLPYVCETCGKRTSTLAHLRSHETIHTTERKLYKCACGAEMRTELGYHLHQRIHTGEKPYECEECGDRFLSASRRLDHIKRRHRSTKEMPHGCAMCQARFITDEPLCPSGICAACASQAIAAQEFRSLVTDSCKIWSYAVYQLDNIPLHDAPAVKSLCAFLRPDNLNIQVARDYTHNDKTTPLIRLKTRMNKKKNDERKPRAHRSGPPCKCTDCGKEFISPYYLAVHFKNSGQKDACNTCGIVLLRGKQMRDHLVKVHREDAQLCKECPAIFTNDIDAKNHEKKAHKDGLTCGDCGRTFLRSASFESHSQMHAVRTCRACGIQFTNRACYREHRSKCEPDAKPDRDTIPRNRRSNIRDPATFTCDYCHKTYTSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHSVVHTRERNFGCDICGAKLVSKMAAVYHRRRHTGEKPYRCEDCGDCFISASRRSEHAKRKHGKGPRVHCMECPSTFVRIHELKKHIEKAHSKNSVISLLDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-