Basic Information

Insect: Tortricodes alternella
Gene Symbol: THAP9_1
Assembly: GCA_947859335.1
Location: OX401972.1:8598425-8613132[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-09 1.5e-06 28.1 0.1 3 41 17 55 16 60 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-09	1.5e-06	28.1	0.1	3	41	17	55	16	60	0.88

Sequence Information

Coding Sequence: ATGCCTCGGATCTACGTGCGGAAGTCAGATCGGGGAAATTATTGTAAAGAAAAATTGGCTGAAGCTATCCGTAAAGTACAGGCTGGCGTGTTAACCGGCTACGAGGCCGCCGTCCGCTACAACGTTCCCCGGTCCACTCTCATGGACCGTGTCTCCGGTCGCCACGGGAGGAAGTCCAGGAGCATGGGCAAACCCCCAGTACTACCTGAAAACCTAGAAAAGAAACTAGCAAAAATCCTACGTTTCATGAAAGCGAATGGGTTTTGCTTAAGCAAAAAAGAATTATTAGAACTAGTTGGTGAATACGTGAGATCCAGTAAAAATGAAAAAGTTAAAGGGTTCTATAAAACTAGAAATCCCGGCGGTGAATGGTTTAAAGCTTTTGCAGCGCGAAATGCGTTGGATACTAAACTGCAAGGAGAGCAGGGAGTAAAGGAAGCTGACCTCACAAAGGTTAAGGAATACTTCGCCTTACTCAATAAAGTTAGTGGTGAGTTAAATTTGTGTGATAAACCTGTAAACCTCTGGAATATTGAAGAAACTAGCTTCAGAATAACTAGTGAAGGTTGTGTCAGAACAAGTAATACAGACATTAAACGGAATGCAACAGTTGTAACAGCTTGCAACGCTGCGGGCAAAAAAGCGCCTTTGCTCATTATCTTAAAAGACAAAAACCAGGTTTCAGATAACGATGATGATAATGATAATGATGATGATGATGAAAACTGCTACACTGTCACCAAGGAAGGATGGTTGGAGCGAGCAAAATTCAGGGAATATTTCACAAAATCCTTTCTAACCTCTCTCCGAGACATTCCACCAATTCTGCTAACATTCAACGGACATTCTTCTCACATTGATATGAAACTTATCGAAGAAGCTAGAACATCCGACATCATCTTCTTAAGAACTCCATTACAAAAAGATCTTTCAGTATTTAACTGCCTCAAATTTAAATGGGACGACAACTTTGATAAATGGCAAAAAGAACACATTGGATGTGGAATTCCCGAAAGTGAGTTTGCTGAAATAGTGACTAGGACTTTCAGTGATTTTAAGATCGAAGACATTCAAGATGGTTTCAAAAACGCCGGGATATTCCCGTTTAATGATAGCGTATGCAATGATTTATTTTATGCTGACGCTGAAAAGCATACAGTAACGATTTATAATGACACGGATGACGATGATGATGAAACAATTGGCGCTGGGGACTTCGAAATGGTTGACGTTAACCCAATTCAAGAGCCTTCAATAAAGACTGGTGCAGTTGAAGTGAAAGAGAACCCACCGGACGCCCCAAGTGAAATTGACGAATCAAGCTCCGAATCATCCGAGGTATCTGAATCTGAGTCATCAAGCGATGATGTCCAAAAGGCTTGTGAAATGCCCAGCTGCGTCCTGCGCTATTGCACGAACACATCGAAAAATGCAAACAAATCGACCGGGACAACGTTCCATAGATTCCTCAAAGGCGACCACCAATACTTCGAAGCGTGGCTCAAATTCGTCCGCTGCGACCGGAGCGAACCCAACTGGGCCCCAACTGAGCATGCCTATCTATGTTCAGCGCATTTCCGCGAACAAGACTTCATTCTGACCAGCACCGGTCGAAATTTCTTGAAGAAATCAGCTGTACCATGTTTTCCTTCATCATACGACACGCTACATCCAAGCAATGAACCAAACTCGAACTCATTGAAAACTGCTGATGCATCCGAACATGCGTGTGGAGGCGGTTCTGTCTGGGACGCCAATAAACTTGCGTTTAAAAAAAGCGGCAGAGCTGAGGACTACGAGCGCCTCATCGAGGCAGCAACGACGATTCGCGCGCCGAACATCGTGTGCTGTGTGTTCGGCTGTCGCAACAACAGCTTTGATCAGCAGGACAAGAAATTCTTCCACTTTCCGACTGACCAGCAGCGGCGCAGCGAATGGCTGAAGCTCATCAACCGCGAAGACCTGGCTTCCAAACTGAAGTATGGGAACACCGACAACAGGGTTTGCTCCGATCACTTCGACGAGTATGACTACACTCACGGCATGCTCAGCAAGGATGCTTTGCCACATCTGGGGTTGCCGAAGAAAAGGGCAAAATTTGTTTATGAACCGGACGCTGACGCAGGGCCTTCTGGAATACAAACATTACCACAGGTCAAAATCGAGAATACAGACTCTGAAGTAATGGAAGTTGAGATAAAGTTTGAACCTGAGGAACCACCTCAAATCAAGTTTAATGAGCCCACAATTCCACCCATCCCAACAATAAACTTCAGACCCACTATCCTGCCACGACCAATACTCCCGTCAACTCTGACTCCTGCGGTCCCGCCGCTAAGAGTCCTGAGGCCTATTCTACGGCCATCATCAGGTATCATCAGACCAGTAGGCGTTGAAACTCTTCCTGTCATCCAAAATTCTTTCAAGATAGTAGACGTTGAACACGATATCCACAATTCAGTCCGTATCCAAACGCAAACCAGTAAAAAGGACGCCTTTCTGAGAAGAGCTACGATTTCTGCAATAGAACAGATCAACCTGGACCCTATACCACCGGTTGTCCCAGAGACATCATCAATACACATTCAGACAACAAAGAAATTGGTGGACCTAATGAATTTACCAATGAAGAGAAAGTACGATGCTGAGAAACGAGACGCCCAGAAGAAGATAAGGTATTTAGAGAAGGCGTTGAACAACCCGAAAATGAACAAGACCAAGTTCTTAGAATGCTGCGACAGGTTCTTGGATGAGAAGATAGCTAACATTGTGAAGTCGCACGCGACCTTGCTGGACAAGTACCAAGGAAACCGTTACAGCAACAGCTTCAAGACCTTCGCTCTCAATTTATATTTATGCAGCCCGCCATCCTATAAATTTGTTGAGCAGTTCTTCTATCTGCCTTCAATGAAGACGATCCAGAGATCCAAAATACCTGTCAGAACAGGTATAAATCCAAGTTTGATCGAAGGCTTGAAGGTAAAAGTTGATGAGATGAGCGAGAAGGAGAAAATATGTACGGTGTGTTTCGATTACATGGGTGTTAATAAAAACCTGTATTATGACGTCACCAATGATTATTTGTGCGGGATTCAAGATATAGATCAAGTACTAGGGTCGGAGCCAGCGCAGTTCGCGCCTTTGATCATGGTTAGGGGCTTGTACAGTAAATGGAAGCAGCCGGTGTCATTTGCGTTGGTCTCGAAGAAGATCTGGTATCCAGCGCTAAAGGAATGGTTGTTGAAGATAATTGCCCTGTTGTTAGACATAGGGTTGAAGGTAAAAGCGTTCGTGGCAGACTTTGATTCGGAATTTCTCGATTTCTCCGACGTATCTGCAACTGAACCGTATATAGAAGTGAATGGGCAAAGAATTTACCAAATATTCGACGTACCAAACCTCTACAAGAATGCCAGAGACGACCTTATGAGATATGACTTCCATATCGGATCAAAAGTCGCGAAATGGAGTCATATATTGAAAGTTTATGATGCCGATAAAAAACAAGAGCTGAGTTTGATGCCGAAAATCACTGAACAACATGTCCGAGCGGAAGAGGAGTCGAAGAACGGCGTCAAAAAAGCAATCCAAGTGTTCAGCCGTGCGGTCGCCGCCGCTATGAACTTTCATGTTATAGCCAATATGACTCATAAAAAAACTAGAGACACTATCGAGTTTATAAAAACAATGAACGATCTTTTCGACATGCTCAATTCAAGGAACACTCTGTCTGAAACAGAATTCAAACAATCGTACAAAGGTACAGATGAACAGAAGGAATTCGTGATGAATACGTTGGAGTATTTGCAAATGTTAGAAATGAAAGACAAAGCCGGGAATACCGTGGAAAAGAAAGTGACTTTCGTTACCGGATTAGTGATTACAATAAAGTCTCTGATATCTCTGCAAGAGGACTTAATGAAGGAGAATCTAAGGTTCATATCAACAAAGAATTTGAGCAAGGATTGTATGGAAACGTATTTCAAGAAAGTACGGCTGCTTGGAGGAAATTGTTGCGCACGGCCAACCCCTATAATGTTCACTAGATCTTTCAGAAGGCTGTTCCTGACGAATCTAGTTAACAACACGAAAGAAGGTGGCACTGTGATTGACTTGAAATCAACGCTGACTAAAATATCGGACTATGTCAAATCAGATGTTAAAGACGAGCCAGAACAGAACAGGAGTTTGAGTGTTGGCACCAGTGACTACCATTATCTCTGGCCGATACCTTCAATTACTTATATATCAGGATACCTGCTATGGAAAATCGTTGAGAGGCACGCATGTCCGAATATTATCGAGAATCTTAATAAACACTTCAATTTAAATGGACCAGATAGTGAACAGTTACTGTCAATATTAAAAGAGTTTAATGCAGATAATGTTAAAAGAAAAGACATGCCGAAACCGCCAGAATCGCTGGTTGCATTCGTCGACAAAATGGATGAGATGTTTAATGATTATTATCGAAGGGCGGATATGGAGGTATACAGTTTTGGATGGAACGTGTACCTAACGATGGAGGGGGAGCAGTTCGAAATGCCGTGCGAATGTTTCCCGTTGAAGTCCTTGAAATTCCTGTTTATTAGGTTAAAGATTTTCCATACCGTGAAAGATTATAATAGAAAGAACAAGCCGACGCGGCGAAACTGGAAAGGGATACGTAAGCGTGTGCCGCGAGACTGA
Protein Sequence: MPRIYVRKSDRGNYCKEKLAEAIRKVQAGVLTGYEAAVRYNVPRSTLMDRVSGRHGRKSRSMGKPPVLPENLEKKLAKILRFMKANGFCLSKKELLELVGEYVRSSKNEKVKGFYKTRNPGGEWFKAFAARNALDTKLQGEQGVKEADLTKVKEYFALLNKVSGELNLCDKPVNLWNIEETSFRITSEGCVRTSNTDIKRNATVVTACNAAGKKAPLLIILKDKNQVSDNDDDNDNDDDDENCYTVTKEGWLERAKFREYFTKSFLTSLRDIPPILLTFNGHSSHIDMKLIEEARTSDIIFLRTPLQKDLSVFNCLKFKWDDNFDKWQKEHIGCGIPESEFAEIVTRTFSDFKIEDIQDGFKNAGIFPFNDSVCNDLFYADAEKHTVTIYNDTDDDDDETIGAGDFEMVDVNPIQEPSIKTGAVEVKENPPDAPSEIDESSSESSEVSESESSSDDVQKACEMPSCVLRYCTNTSKNANKSTGTTFHRFLKGDHQYFEAWLKFVRCDRSEPNWAPTEHAYLCSAHFREQDFILTSTGRNFLKKSAVPCFPSSYDTLHPSNEPNSNSLKTADASEHACGGGSVWDANKLAFKKSGRAEDYERLIEAATTIRAPNIVCCVFGCRNNSFDQQDKKFFHFPTDQQRRSEWLKLINREDLASKLKYGNTDNRVCSDHFDEYDYTHGMLSKDALPHLGLPKKRAKFVYEPDADAGPSGIQTLPQVKIENTDSEVMEVEIKFEPEEPPQIKFNEPTIPPIPTINFRPTILPRPILPSTLTPAVPPLRVLRPILRPSSGIIRPVGVETLPVIQNSFKIVDVEHDIHNSVRIQTQTSKKDAFLRRATISAIEQINLDPIPPVVPETSSIHIQTTKKLVDLMNLPMKRKYDAEKRDAQKKIRYLEKALNNPKMNKTKFLECCDRFLDEKIANIVKSHATLLDKYQGNRYSNSFKTFALNLYLCSPPSYKFVEQFFYLPSMKTIQRSKIPVRTGINPSLIEGLKVKVDEMSEKEKICTVCFDYMGVNKNLYYDVTNDYLCGIQDIDQVLGSEPAQFAPLIMVRGLYSKWKQPVSFALVSKKIWYPALKEWLLKIIALLLDIGLKVKAFVADFDSEFLDFSDVSATEPYIEVNGQRIYQIFDVPNLYKNARDDLMRYDFHIGSKVAKWSHILKVYDADKKQELSLMPKITEQHVRAEEESKNGVKKAIQVFSRAVAAAMNFHVIANMTHKKTRDTIEFIKTMNDLFDMLNSRNTLSETEFKQSYKGTDEQKEFVMNTLEYLQMLEMKDKAGNTVEKKVTFVTGLVITIKSLISLQEDLMKENLRFISTKNLSKDCMETYFKKVRLLGGNCCARPTPIMFTRSFRRLFLTNLVNNTKEGGTVIDLKSTLTKISDYVKSDVKDEPEQNRSLSVGTSDYHYLWPIPSITYISGYLLWKIVERHACPNIIENLNKHFNLNGPDSEQLLSILKEFNADNVKRKDMPKPPESLVAFVDKMDEMFNDYYRRADMEVYSFGWNVYLTMEGEQFEMPCECFPLKSLKFLFIRLKIFHTVKDYNRKNKPTRRNWKGIRKRVPRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01463315;
90% Identity: iTF_01463315;
80% Identity: iTF_01463315;