Tyan064091.1
Basic Information
- Insect
- Topomyia yanbarensis
- Gene Symbol
- nfxl1
- Assembly
- GCA_030247195.1
- Location
- CM058070.1:366535084-366537967[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.9 3.5e+04 -3.0 1.4 14 19 199 204 199 204 0.86 2 17 0.16 6.1e+03 -0.6 0.8 4 10 235 241 234 241 0.95 3 17 2e-07 0.0079 18.2 17.0 1 19 249 266 249 266 0.99 4 17 2 7.7e+04 -4.8 1.5 5 10 291 296 291 296 0.89 5 17 1.4e-05 0.53 12.4 13.0 1 19 302 321 302 321 0.94 6 17 2.2e-09 8.6e-05 24.5 13.8 1 19 356 374 356 374 0.99 7 17 1.8 6.8e+04 -3.9 0.8 6 10 399 403 398 405 0.54 8 17 6.3e-06 0.24 13.5 13.1 3 18 411 426 409 427 0.91 9 17 0.94 3.6e+04 -3.1 0.1 9 12 444 447 442 448 0.74 10 17 2.4e-05 0.93 11.6 16.1 1 18 461 478 461 479 0.94 11 17 6.5e-09 0.00025 23.0 15.9 1 18 488 505 488 506 0.97 12 17 0.021 8.2e+02 2.2 14.7 9 19 552 562 544 562 0.82 13 17 0.041 1.6e+03 1.3 6.6 3 12 575 584 574 584 0.89 14 17 1.1e-05 0.44 12.6 3.9 1 11 655 665 655 666 0.96 15 17 0.64 2.5e+04 -2.5 0.7 15 18 679 682 678 683 0.80 16 17 0.0021 82 5.4 16.7 4 19 696 711 694 711 0.93 17 17 3.5e-07 0.014 17.5 13.0 1 18 763 782 763 783 0.89
Sequence Information
- Coding Sequence
- ATGGCTCATCGTAACCGTAACAATCACCGAAGTACCACCCAACAGTCCAATCCATGGAATCGCAATCAGATCGAAGAAACTGTTAGCAACAATCAGCCGCAACGACCCAAAGCGGCACACGGTCAGAAATCGAGCAAACAACCCGCATCCACTGGGAATGATAACACCTTCCTGAAGCAGTCGGAAGAAAAGTTTAACCGTGCTCAACGGAAGCATCTAGAGTCGGCTAAAAAGTACACCCAGCAGTACGAATCCAGCGAGGATGAGGACGAGGAAGAATCTGCATCGCAGGATATATTGGGTGGTGTGCTGAAAAATTACACTGGATCCGGGGGAGATATTGGCAAGACGCAAGaatatttgcaaaatttattgGAGTCCCGCTCGGCGGTTTGTTTAATTTGTATCGGCGCAGTAAAGCGAGCGGATTCGATTTGGTCCTGTAAGAGCTGTTATACCTTTTTCCATCTGTTGTGTATTCAACGCTGGGCCAATGACAGTATTTCGCTGAAACGTATCAGCCATGAACAGCAGGAAGGCTACTACAATAACCGGGGTGAGTACGTTCCGAAGCCGACTCTTTCCATTCACTGGGACTGTCCAAAGTGTCGTAAGGAGTACGAACCGGTGGATATACCACGGCACTATGAATGTTTCTGCACGAAGGAGCAAAATCCCCAGAACCATCTGTGGCTTATTCCACATTCCTGTGGTGAGACGTGCAGAAAGCGGTTGGTACCGGATTGTGGTCACAGTTGTGTGCTGCTTTGTCACCCCGGACCATGTCCTCCGTGTCCTCAGACGGTTGCTATCTCTTGCAAATGTGGTCAGTCGGCGCCGAAAACGATTCGTTGTTCGCAGCGGAACTGGACCTGTCTTAAAACGTGCAAACAAAAACGAAATTGTGGTATCCATGAATGCGGTGAAATATGCCATTCCACCGACGAATGCCCTCCGTGTCAAAGTCGAAGTCGACAGAAGTGCCTTTGCGGCAGTAAAACCAAGGAGGTGAAATGTTCGGAGTCAAACTGGCAATGCGGTAAAGAATGTGGTAATAAGTATGCTTGTGGGTTACATCGCTGCGAAAAAGTTTGTCACAGTGGCAGTTGTGGTGAGTGTCCGCAAGGCTTGCCAAGGACATGTCCTTGTGGAAAAACTAGTTCCATTGCATCCTGCTCGGAGGAAATTGGAACTTGCGGTGACACGTGTCAAAAGTTTCTAGAATGCCAGGTGCATCGCTGTAGTGAACGTTGTCATCCGGGGGAATGTGGTCAGTGTCTTGAGCTGGTTAAGAAATCCTGTCGATGCGGTTATATGGACAAAGAAGTCGCTTGCCACAAGCAGTTGATCTGTGAAACGAAGTGTAAGAACGTTAGAAGCTGCAATAAACATCCTTGCAATAGAAAATGCTGCGACGGCGACTGTCCCCCGTGCGATAAGCTGTGTGGTAAAACATTGCCTTGTGGCAAACATAAATGTAATTCACTTTGCCACCATGGACCATGCTACCCGTGCAATCTGAAGGCACAGGTTAAGTGTAGATGCGGTGGTACCACTCTGGATGTTCCTTGTGGGCGTGAGAGGAAAGTCGGTTCACCCAAATGTCGACTGCCGTGTCGCATTCATTCCAAGTGTCACCACACTAACCCACACAATTGTCATCAAGGCGAATGTCCTCCGTGCCAGCAGGTGTGCGCGCTGGTTAACGATACAACCATGTGTGAGCATCCCTGCGAGGCAAAGTGTCACGATGCGGTGCGGGTCGTTACGAAGGATAAAAATCACAAACCAGTCGGACCGTGGGATGTTCCGATGGAAATTGTCGAGATCAAAAAACTTCCTCATCCTCAATGCGAGGTGAAGGTTCCGGTAACCTGCATCGGTGGTCACGAGACGTCATTGTGGCCGTGTTATAACTCAAAACCAGCCTCCTGTGGGCGCGCCTGTGATCGAGCACTGCGATGCGGTGTTCACACGTGTCCTCTGGTTTGTCATGCAGTGAAGAAAATCAATTCAACCGACCAAGATCCAAAGTGTCAATCGTGTAACGTAGGATGTGTGATTCCGAGACCCACCGGGTGTGTTCATCCCTGCAAAAGACCCTGCCATCCAGCACCGTGTAATCCCTGTCAGGTTCCCACGAAAACCGCCTGCCATTGTGGTTTGACGCAGATTTTCTACAAGTGTCACGAGTTTTATTCCGGTGACGATAAAACTGAGGACGAGTTGAAGCAGTTTAGGGAAGCCATTCTTAGCTGTGGTCAAAAATGTATCAAGAATTTTCCCTGTGGTCATCGATGTACCTCCACCTGCCATTCGGGTGATTGTCCTAATCCGGAGACGTGCAGTAAGAAAATCAAGATTACGTGTGATTGCCGTAACCGAAAGATGGAAGTTAATTGTGGCGGCGCCAGGAGCAAAAGTAAATCGTTGCAATGTGACGAGAGTTGTGAAGTCTTGAAAGAAGACAAAAAACGAGAATTGACGGATATTGAGCGCCAACAGAAGGAACAGGAAGCAGCGGAAAATCAACGTGCTCTGGAGGAGTACGAAAGAAAGTTCGGTCGTAAAAAGTATCGTGAACGAAAACGAGTTCAGGTGGAGGAAACTAAAGACAGCAAGTGGTTGCTGTACGTAGTAATATCAGTGGGAATTCTCGTAGTTGCAGTTATTGCGTATTTCATTATAGTTGATTAG
- Protein Sequence
- MAHRNRNNHRSTTQQSNPWNRNQIEETVSNNQPQRPKAAHGQKSSKQPASTGNDNTFLKQSEEKFNRAQRKHLESAKKYTQQYESSEDEDEEESASQDILGGVLKNYTGSGGDIGKTQEYLQNLLESRSAVCLICIGAVKRADSIWSCKSCYTFFHLLCIQRWANDSISLKRISHEQQEGYYNNRGEYVPKPTLSIHWDCPKCRKEYEPVDIPRHYECFCTKEQNPQNHLWLIPHSCGETCRKRLVPDCGHSCVLLCHPGPCPPCPQTVAISCKCGQSAPKTIRCSQRNWTCLKTCKQKRNCGIHECGEICHSTDECPPCQSRSRQKCLCGSKTKEVKCSESNWQCGKECGNKYACGLHRCEKVCHSGSCGECPQGLPRTCPCGKTSSIASCSEEIGTCGDTCQKFLECQVHRCSERCHPGECGQCLELVKKSCRCGYMDKEVACHKQLICETKCKNVRSCNKHPCNRKCCDGDCPPCDKLCGKTLPCGKHKCNSLCHHGPCYPCNLKAQVKCRCGGTTLDVPCGRERKVGSPKCRLPCRIHSKCHHTNPHNCHQGECPPCQQVCALVNDTTMCEHPCEAKCHDAVRVVTKDKNHKPVGPWDVPMEIVEIKKLPHPQCEVKVPVTCIGGHETSLWPCYNSKPASCGRACDRALRCGVHTCPLVCHAVKKINSTDQDPKCQSCNVGCVIPRPTGCVHPCKRPCHPAPCNPCQVPTKTACHCGLTQIFYKCHEFYSGDDKTEDELKQFREAILSCGQKCIKNFPCGHRCTSTCHSGDCPNPETCSKKIKITCDCRNRKMEVNCGGARSKSKSLQCDESCEVLKEDKKRELTDIERQQKEQEAAENQRALEEYERKFGRKKYRERKRVQVEETKDSKWLLYVVISVGILVVAVIAYFIIVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00949479;
- 90% Identity
- -
- 80% Identity
- -