Tyan002006.1
Basic Information
- Insect
- Topomyia yanbarensis
- Gene Symbol
- grn_1
- Assembly
- GCA_030247195.1
- Location
- CM058068.1:35175781-35190053[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 9.6e-16 59.1 4.3 1 35 53 86 53 87 0.98 2 2 9.4e-20 8.1e-16 59.4 4.8 1 35 112 145 112 146 0.97
Sequence Information
- Coding Sequence
- ATGATTTCGAGAACGATCAGTCAGAAGATTCGCTACAAGTTTCACCTGTACACTGACACCACCTGCCGGAACTCCAATCCGACACCCGTCTGCCACCTTCATAGAGTATTTGTAAGAATCGTTCCCTTACCTTCCCTACTTACAGAGGGACGAGAATGCGTCAACTGTGGTGCCACCTCGACGCCGCTGTGGCGACGAGATGCCACCGGCCACTATCTGTGCAATGCTTGCGGACTGTACTACAAAATGAACGGCCAAAACCGGCCGCTGATCAAACCGAAACGGAAACCAGTCACCTCCCAGCAAAGCGCTGCCCGGCGGGCGGGAACGTCATGTGCAAACTGCAAGACCACAACTACCTCGCTGTGGAGGAGGAACCAAAGCGGGGAACCAGTTTGCAACGCCTGTGGACTGTACTACAAGTTGCATAATGTGGATCGGCCGCTCACGATGAAAAAGGAAGGCATTCAAACGAGAAATCGTAAACTCACTGCCAAATCTAAGAAGCGGAAATCGACGCCCGGCTATAGCTTCTCCTTCGGAGATCTCATGAACCCACTGGATCACAACAAATCCTTCCCGGGCGCTTTTCCAACCTCGATGGGACAACACGCCCATCTCTCCAGCGGACTTCATCACGCCCATTCTCACATGCACGGCGGCTGGTACGCGACCGGGCTGGGATCGCTCGGAACGTCCGGTAGCCTGCAGAATGGCTTCAGCGGTGGAGCACCGCTGGGAACCGGTGCCGTAGGGCACCCGCAGTCGTACCACCTTGGGTTGAACTCTATGAGTTGGAGATCCGAATACACGTGA
- Protein Sequence
- MISRTISQKIRYKFHLYTDTTCRNSNPTPVCHLHRVFVRIVPLPSLLTEGRECVNCGATSTPLWRRDATGHYLCNACGLYYKMNGQNRPLIKPKRKPVTSQQSAARRAGTSCANCKTTTTSLWRRNQSGEPVCNACGLYYKLHNVDRPLTMKKEGIQTRNRKLTAKSKKRKSTPGYSFSFGDLMNPLDHNKSFPGAFPTSMGQHAHLSSGLHHAHSHMHGGWYATGLGSLGTSGSLQNGFSGGAPLGTGAVGHPQSYHLGLNSMSWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -