Basic Information

Insect: Topomyia yanbarensis
Gene Symbol: zld_1
Assembly: GCA_030247195.1
Location: CM058069.1:301655834-301658803[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0041 0.41 13.2 7.8 1 23 22 44 22 45 0.94

2 7 1.3 1.3e+02 5.3 0.2 2 19 269 286 268 291 0.92

3 7 0.0071 0.73 12.4 2.9 1 23 518 542 518 542 0.92

4 7 0.0028 0.29 13.7 5.8 1 23 852 875 852 875 0.97

5 7 0.77 78 6.0 2.4 1 10 881 890 881 903 0.91

6 7 6e-05 0.0061 19.0 6.2 1 23 909 931 909 931 0.98

7 7 0.0014 0.14 14.6 3.4 1 23 937 959 937 959 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0041	0.41	13.2	7.8	1	23	22	44	22	45	0.94
2	7	1.3	1.3e+02	5.3	0.2	2	19	269	286	268	291	0.92
3	7	0.0071	0.73	12.4	2.9	1	23	518	542	518	542	0.92
4	7	0.0028	0.29	13.7	5.8	1	23	852	875	852	875	0.97
5	7	0.77	78	6.0	2.4	1	10	881	890	881	903	0.91
6	7	6e-05	0.0061	19.0	6.2	1	23	909	931	909	931	0.98
7	7	0.0014	0.14	14.6	3.4	1	23	937	959	937	959	0.92

Sequence Information

Coding Sequence: ATGGCCAGTAATGGGGGGACTCTACATGGGGTTCCCCAAGCACAGCAGAGTTTAGTTGGACATCACAGCTGCTCTCACTGTGGTCTCTACTTTGAGAGTTCCTCGTCGTTACAAGTGCATATGCACTATCATCATGAGACAATGAACCGTTGGGGCTCGTCAGCAGCTGGAAGTTTGCCAAGTTCAACAACGTCTTCTACACCAACTTCGGATACGGAAAATAATAATCAACCATCGTTGAAGTCACACGTTAAATCAACATCACCGCATCAAACAATTGCAGCGGCAGCGGATTCAAGTGATAACCAACCATCGACTCCGCAGCCATCATCGCTCCCAGAGCCAGGTACGCCACAAAGTTTTACTGGCGGCGCTTCGCCATATCAGCAACCACCCAATATTATTGCTCCACCAGAGATGCACTATCCTACCTATATTCACGGGTATGATCCTTACTATCATCCAACAAGTATTGATTACGGAAATCCGCTGCCTCCTCCTCATCTCAATAGTCAACCCCAACAAGAGTACAAAGCAGTGCCTTCCGCCAGATACCACCCTTACAGCAACAACATCCACAGTAACGGAAATCCTCATAATGTTTCCGCTTTAAATTCGAACAATACTGCAACCAATAATGCAACACCGCTCAACAATGCTGGGCTGAGCCCACAAGTGGTTAGCTCTTCTAGCAGCACTCAAAACCCAACGACACAAGCGTCCACAACAGTAGCATCATCAACTACAACTTCGTCACCGCAACACAGCAGTCATATTCCACCTACACCATCCCCATCGCCGATTCAATGTGAAAAATGCGGATTGGTGTGTGATAATGATGATGCACTAAGTGAACATGACGCATCAGCCCATCAATCTCAACAACAACAGCCACCGTCGCAACAGTCGTCCGATGGAAACAGCATGAATCGGAACGAGGATTCAGACATGCACAGTGGCTATACTTATCCTCCGCCATTTATAAAAGAAGAGCCGCCATCATCAGATATTCTAGATTTAGATTCTCAGAAAATGGTCTACCCGCCGGAACATGCACTACCTCCAATGAACTCGTTGCACCCGCTGCAATCAATGCAACGTCATCCGATGATGTGGCCACACGATCCACATAACTTTATGCCACCACATCATCCACACGATTTGAAAGCACCGTATTACCATCCACAAATCAAATCGGAATACTCCACAACCCCTTCCTTGAAAGGCGACTATCCGCAGCATGCTGCAATGCATGTGAAACAAGAATATACACCGATCGTGGCACCTTCACCTCtaaaaaatgaatacaatatTCCACCGACACTACCACCAGCTGTTCCGCAACCAAACCAATCGGTGAAACCCTTTACCGAGGAATGTGAGAACAATCAATTGGCTACAAGTCCGTCGGATTTTCCAAGCACAACGACGCCACAAGAAAGTAATTCGCAATTTCGAAATTTTGAGCCTCCGACATCTTCACTTCCAAACAGCGCATTACCAACAAAGGGTACGGCGTGGAAATCTAATGAGGCTAGAAGACCAAAAACATACAATTGTACAGCGTGTAATAAATGGTTTACAAGTTCCGGCCATTTGAAGCGCCACTACAATACGACACTGCATAAAAACGCCGTTAAATCCAGTGGCCAACCGGATCCAGCAACATTACCAATTAGTATTCACCATCACCCTGGCCGTGATCCAAACTATGCTACAAAGGGAAGGAGGGGAGCAGCGGCACAAATACAGCAACCCATACAGCAACCGGTGCCACCTCCCGATCCTCCTAGAAGCCCTGATTATGGTTCTCAATACAACACATCGGGGTTTACAACCCCCTCTGGACATCAGATCACCTCGAATCAGGGGTTTCATCAATACAATTCCAATATTCAAACCACCTCGTCAACGGTTCCCCCAAACGGGGTAGCAGGTCCCTCCGTCCAAGCCTCCCAACCGAGGGGCCTGCAGATCTTCTCGAACAGCAACATGGAAACGTTGCAGCAGCAGGAGCAAAcggaacaaatgcctactatcaccaccaccaccagcatTCCATCGCCGTTGCACAGTCAACACATCATCAATACAACGGCGCAATACCCCACCACCAACCCTTTAACTATCAACATCAGCATCCCATCATTCCAAACCATCCTGCCGGAGGCACCGAGTTATCACCATATTATTGGTAATCATAACGCATCAACCAGTGCGAATGAAATGGTGTCCAATGATCATTACTATCCACTCAATGGTTATGACACAGCGATGACCGAAGAAACATCCATAGCTTCGACCGTAACTCCGATCTCATCGGAGTTTCCTCGATATCCGGGGGGCGCCGAAATGTATCAAGGCGATACGGCGCCCCCCTTTTCACCTAATGTACCGGAGCAGTATCACCAAACTTGCACGATTTTTAGTGAACTCCGCACACCGACTCCGCAATTGGCTGCCACAGTTCCGTCGCTTTCGCCGGCGCCATGTTCACCAAGGGTTACATCGACTGGCACAACTCTGCCGGCGGAGAATCGTCCCAGCGATGTTCACCGTTGCGAAGAATGTGACAAGGTTTTCAATAAGGCATGCTACTTAACACAACATAACAAAACCTTCCACTCCGGTGACAAACCGTTCAAGTGTCATCGTTGTGGTAAACGGTTCCCATGCGATCAATCGCACGAGGAACATCTCGCGAAGCACGGCGGCGAAAAACCATTCAAATGTGAGCTTTGCCCAAAACAGTTTAATCACAAGACGGATCTACGCCGGCATATGTGTCTACACAGTGGTTCCAAGCCGTATGTTTGTGAGCAATGCGGTAAAGGATTCATTCGTAAGGATCATATGCTGAAGCACTGCGACACGCATAGAAAGAAAGTAACTACGAGTGTGAAGAAGGCGGTTCTCGGAAAAAATGGGCCGCGAGTCCAATCGAAGGCTGCCTTTATGGATGATGAATGA
Protein Sequence: MASNGGTLHGVPQAQQSLVGHHSCSHCGLYFESSSSLQVHMHYHHETMNRWGSSAAGSLPSSTTSSTPTSDTENNNQPSLKSHVKSTSPHQTIAAAADSSDNQPSTPQPSSLPEPGTPQSFTGGASPYQQPPNIIAPPEMHYPTYIHGYDPYYHPTSIDYGNPLPPPHLNSQPQQEYKAVPSARYHPYSNNIHSNGNPHNVSALNSNNTATNNATPLNNAGLSPQVVSSSSSTQNPTTQASTTVASSTTTSSPQHSSHIPPTPSPSPIQCEKCGLVCDNDDALSEHDASAHQSQQQQPPSQQSSDGNSMNRNEDSDMHSGYTYPPPFIKEEPPSSDILDLDSQKMVYPPEHALPPMNSLHPLQSMQRHPMMWPHDPHNFMPPHHPHDLKAPYYHPQIKSEYSTTPSLKGDYPQHAAMHVKQEYTPIVAPSPLKNEYNIPPTLPPAVPQPNQSVKPFTEECENNQLATSPSDFPSTTTPQESNSQFRNFEPPTSSLPNSALPTKGTAWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKSSGQPDPATLPISIHHHPGRDPNYATKGRRGAAAQIQQPIQQPVPPPDPPRSPDYGSQYNTSGFTTPSGHQITSNQGFHQYNSNIQTTSSTVPPNGVAGPSVQASQPRGLQIFSNSNMETLQQQEQTEQMPTITTTTSIPSPLHSQHIINTTAQYPTTNPLTINISIPSFQTILPEAPSYHHIIGNHNASTSANEMVSNDHYYPLNGYDTAMTEETSIASTVTPISSEFPRYPGGAEMYQGDTAPPFSPNVPEQYHQTCTIFSELRTPTPQLAATVPSLSPAPCSPRVTSTGTTLPAENRPSDVHRCEECDKVFNKACYLTQHNKTFHSGDKPFKCHRCGKRFPCDQSHEEHLAKHGGEKPFKCELCPKQFNHKTDLRRHMCLHSGSKPYVCEQCGKGFIRKDHMLKHCDTHRKKVTTSVKKAVLGKNGPRVQSKAAFMDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00402291;
90% Identity: iTF_00949345;
80% Identity: -