Basic Information

Insect: Topomyia yanbarensis
Gene Symbol: BCL11A
Assembly: GCA_030247195.1
Location: CM058069.1:354601235-354622706[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.6 1.6e+02 5.0 2.6 1 23 248 271 248 271 0.95

2 6 0.00013 0.013 17.9 6.6 1 23 598 620 598 620 0.98

3 6 0.029 3 10.5 4.9 1 23 626 648 626 648 0.99

4 6 5e-07 5.1e-05 25.5 2.9 2 23 872 893 871 893 0.97

5 6 3.6e-05 0.0036 19.7 3.3 1 23 899 921 899 921 0.99

6 6 0.00023 0.024 17.1 0.4 1 22 929 950 929 950 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.6	1.6e+02	5.0	2.6	1	23	248	271	248	271	0.95
2	6	0.00013	0.013	17.9	6.6	1	23	598	620	598	620	0.98
3	6	0.029	3	10.5	4.9	1	23	626	648	626	648	0.99
4	6	5e-07	5.1e-05	25.5	2.9	2	23	872	893	871	893	0.97
5	6	3.6e-05	0.0036	19.7	3.3	1	23	899	921	899	921	0.99
6	6	0.00023	0.024	17.1	0.4	1	22	929	950	929	950	0.97

Sequence Information

Coding Sequence: ATGACAATCCGACCGAAAACAGAAAAGAATTTCAACGAACGCCCATTGCTTTTAATTAAACCCCCGAAAAGCGTGCAAAAACCCCTCCTGCGGGAGAAGCGAAATTCAGACACCGGCGAATCTGAAGGCACTCAAGATATCCTAACATGCGGGTCCTGTCAGAAAACGTTCGCCCTCTCCGACATTGTGCGATTCATCCAGCACAAAGTGCTGCAGTGCAACAAGGAAAATTATGGTCAATGCTACTCTCAAGcaGCGGCCGGTGACAGGGATTCGGACGATGGTCGACCGTTGACGGTGGCCAACTCGAGGCGACCTTCGATTTCGGCTCCCATCACGGTGCGGAAATCCAGCGGGTCCCGGGTGCACACACCTCCACCGACCAGTCCGGCCGAAATGTTGCGGGATGGCGCCTCCAGTACGCCGAAAAGGCTTAACGAAGACACGGAAACTGCCTGCTCCACCCGTTGTCCCTCAACCGCTAGCCCCCTTGGTACCAGCGGCAGTGGCAGTGGCGCCGAGGACGAAGATCCCAGCAAACGGACCGCCACCACCGCCACACCCGACGGTACGGCGGCAGCAATCGAAATCAAACAGGAACAACCCGAGTCGGACGCGATCAATAACATAGATGACCGGTCGTCGCAAAACGATGGAGAACCTGTGCTGAAAAAACCCCGCACCAGCACCACCGAAGTGGTGGACGCTGAGTCCAACACAACCAGCAGTGAACCTAGCAACTATGTCTGCAGTACGTGCAAAACCAAATACCATTCCGCGTGGCGGCTGGTGCAGCATGTCCAGCATGCCCACCGAGTAAAGATCTACGAGGTTTCGCTGATTGACGACGATGACGAGGAGGAGAATAATAAAAAGGCGCGGGAAAGAACGGGGAATGAACGCGCTGATACCAGCGAAAACAACCAGGCGGAAGCAGATAATGACGATGCTTCTCCGGTGGCCAACGAGCCGGAATCGTTGGTTCAAAGCGGAAAATCTAGTTCCATGAACAATCTTAGTGGTAGCTCCAATTGTTCAAGCAATAACACGAGCAGCAGTTCCCGGGGAAGTGGAATCAATTTGCTACAGAATCAGTTGCAACTtcagcaacagcaacaacaacaacaacagcagcagcagcaacaacagcctCCTCGTGATTCTCAGAGTCTTCCACCCCCCGGTTTGAGACATCACCCTCTTCTTCCTCCACCAGAAATGCACCCGAATCCATTTGGTCTATTGCGAATGCCAATGAATCACCACCCGCACAGTCCGCTATTTGGCCGCGGTCACCATGACTTTCGCATGGAACACCTTATGTCCGAGCAATTTCGCAACCATGGTCTCAATCTTGCAGCAGCTGCAGTCGCAGCGGCGAACCAACTGAAATCCCACAACCAACAATTTAACACCGGAAATACCGTAGTGGAGCGGCCGCCCTCATCGGGTAGCATATCCCTGCCAGGAACCACTCCCGCCGGTCTTGTTTTGGAACCACACATGGATTTTTACTCACAGCGCTTGCGGCAACTCGCGGGTACTACCAGTCCCGGGACTAACCCCAACACCTCCAATTCTCCCAGTCCCCGCAAGCAACACTCCCCTTCCTTCGCCAGTCCCTCCCCATCGCAACTACCACCCACACCGTTGACAAACAACTCCCGACCTCAAAGCCTCACACCACCGGAGAAGCACACCGAGTTGGGACTGGAATCCGGAACGATCACAAACACTCCCCGATCAGCTTCGACACCTCCGAACAAGCAGAGCCAAAGTAATGACGCTTTTCATTCGTGTGAGTTTTGTGGCAAGAAGTTTCGTTTCCACAGTAACTTGCTCGTGCATCGCAGGACGCACACCGAAGAGCTTCCGTTCAAGTGTACCAGTTGCGATTTTTCCTGCATGGATGAGCAAAAACTACAACAACACATGAAAAAGCATGGTAACCCAAACGAGGACGCTGCCAGTGGTCCGGAATCGTTGGATTCCGACATGGAGGACTCGGATAACGAGCTTATGGATGCAGAGGATGATCTCGATGAAGAAGACAATGAGGACGATCAGGATGACATGCTGGGTGAGGAGGCAGAAGATTTAAGCATGAGCAGCACCCAGAGTCATGCCAAGAAGGACGGACAGATGCACATGTCGTCATCGCTGGTCGGTGAACTGATGGACAAGTTTGGACTGTCCAACATTGCCCAGTATTCTGAGGCATACAAACAAGCCCTACAGGAGTCGGGAAACGCATTGAAGCTGCAGCTGACAAGTAAAGATCGAGATAACAACAATAGCGCCATGGCCATCCCCGGATTGGCAGAGAAGTTGAATGGACTTCCGGCCGCGCTACGGATCAAAGAGGAACTAGCGAAGAACATGCTGCAGCACCATAATCCCCAACTTCCACAAGTTCCTCTATTCAATCCGTTCGAGAACCCTTTCGAGGCATCCAAGCGTATGAAACTGGAAAGCGGCGAAAGCTGGTGGAACATCCCCGGCCTTCACCGAAACGATTCTCTTTTCGAAAACCTCAAACCAGGTCGCGATCGAAGTCATCACGGAGGTCTCCTGCAACCCATGATGAAAAAAGAGAACAAACATCGCAACGACACGTGCGAATACTGCGGCAAGGTGTTCAAGAACTGTTCCAATCTTACCGTTCACCGGCGAAGTCACACCGGTGAGAAGCCTTACAAATGCGAACTATGTTCCTATGCGTGTGCGCAAAGCTCCAAACTGACACGACACATGAAAACCCACGGCCGACTCGGCAAAGACGTTTATCGGTGTCGCTTCTGTGAAATGCCGTTCAGTGTTCCCTCGACGTTGGAGAAGCACATGCGAAAGTGTGTTGTTAATCAGGGTAAACTTCAACAGCAGCACGCTCAACAACAGCAACGAGAGCTTCAGCATCTGCAGCATCAACAGCAACTTCATCATCAGCAACAAATTGCCGCCCAGCAACAACTGGCCGCCCAACAGATGGCAGCTGCTGCAGCGGCTCAACAAGCCGCCGCCGTCCAGCAACACCAACACCGggaacacatgcaacaacaaaTGCAACAGTCAACGCCGCAACCTCCACGAGATATATCCATAATTCCAGTGTCCCCACCACTACCACCGCAGCTGCCGTCTGGTTTAATCCTGCCCCCACTGCCCGTTCCACCGATCGTATCCCTAACGGAGCATCAGGAACGTACCGCCACCCCCTCGAACGGCAGCAATCATGCCACCCCCATGGTCAAGGAGGAAGCAGCAACGGCATGA
Protein Sequence: MTIRPKTEKNFNERPLLLIKPPKSVQKPLLREKRNSDTGESEGTQDILTCGSCQKTFALSDIVRFIQHKVLQCNKENYGQCYSQAAAGDRDSDDGRPLTVANSRRPSISAPITVRKSSGSRVHTPPPTSPAEMLRDGASSTPKRLNEDTETACSTRCPSTASPLGTSGSGSGAEDEDPSKRTATTATPDGTAAAIEIKQEQPESDAINNIDDRSSQNDGEPVLKKPRTSTTEVVDAESNTTSSEPSNYVCSTCKTKYHSAWRLVQHVQHAHRVKIYEVSLIDDDDEEENNKKARERTGNERADTSENNQAEADNDDASPVANEPESLVQSGKSSSMNNLSGSSNCSSNNTSSSSRGSGINLLQNQLQLQQQQQQQQQQQQQQQPPRDSQSLPPPGLRHHPLLPPPEMHPNPFGLLRMPMNHHPHSPLFGRGHHDFRMEHLMSEQFRNHGLNLAAAAVAAANQLKSHNQQFNTGNTVVERPPSSGSISLPGTTPAGLVLEPHMDFYSQRLRQLAGTTSPGTNPNTSNSPSPRKQHSPSFASPSPSQLPPTPLTNNSRPQSLTPPEKHTELGLESGTITNTPRSASTPPNKQSQSNDAFHSCEFCGKKFRFHSNLLVHRRTHTEELPFKCTSCDFSCMDEQKLQQHMKKHGNPNEDAASGPESLDSDMEDSDNELMDAEDDLDEEDNEDDQDDMLGEEAEDLSMSSTQSHAKKDGQMHMSSSLVGELMDKFGLSNIAQYSEAYKQALQESGNALKLQLTSKDRDNNNSAMAIPGLAEKLNGLPAALRIKEELAKNMLQHHNPQLPQVPLFNPFENPFEASKRMKLESGESWWNIPGLHRNDSLFENLKPGRDRSHHGGLLQPMMKKENKHRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGKLQQQHAQQQQRELQHLQHQQQLHHQQQIAAQQQLAAQQMAAAAAAQQAAAVQQHQHREHMQQQMQQSTPQPPRDISIIPVSPPLPPQLPSGLILPPLPVPPIVSLTEHQERTATPSNGSNHATPMVKEEAATA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00949283;
90% Identity: iTF_00949283;
80% Identity: -