Basic Information

Insect: Topomyia yanbarensis
Gene Symbol: Zfp646_1
Assembly: GCA_030247195.1
Location: CM058070.1:55812365-55815068[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.4 41 6.9 0.1 1 23 182 204 182 204 0.94

2 15 0.014 1.4 11.5 2.2 1 23 215 237 215 237 0.97

3 15 0.0013 0.14 14.7 0.2 1 21 242 262 242 263 0.94

4 15 0.0047 0.48 13.0 2.0 3 23 290 310 289 310 0.97

5 15 0.088 8.9 9.0 0.2 1 20 316 335 316 337 0.94

6 15 0.0012 0.12 14.9 2.8 1 23 547 569 547 569 0.98

7 15 0.013 1.3 11.6 0.1 1 23 575 597 575 597 0.90

8 15 2.7e-05 0.0027 20.1 0.1 1 23 603 625 603 625 0.97

9 15 0.00044 0.045 16.2 0.5 2 23 629 650 628 650 0.96

10 15 1e-05 0.001 21.4 0.4 1 23 656 678 656 678 0.96

11 15 0.0033 0.34 13.5 2.3 1 23 684 706 684 706 0.98

12 15 2.9e-05 0.0029 19.9 0.4 2 23 714 735 714 735 0.96

13 15 5.4e-06 0.00055 22.2 4.9 1 23 741 763 741 763 0.99

14 15 7.9e-06 0.0008 21.7 1.2 1 23 769 791 769 791 0.98

15 15 0.0035 0.35 13.4 0.1 1 22 797 818 797 821 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.4	41	6.9	0.1	1	23	182	204	182	204	0.94
2	15	0.014	1.4	11.5	2.2	1	23	215	237	215	237	0.97
3	15	0.0013	0.14	14.7	0.2	1	21	242	262	242	263	0.94
4	15	0.0047	0.48	13.0	2.0	3	23	290	310	289	310	0.97
5	15	0.088	8.9	9.0	0.2	1	20	316	335	316	337	0.94
6	15	0.0012	0.12	14.9	2.8	1	23	547	569	547	569	0.98
7	15	0.013	1.3	11.6	0.1	1	23	575	597	575	597	0.90
8	15	2.7e-05	0.0027	20.1	0.1	1	23	603	625	603	625	0.97
9	15	0.00044	0.045	16.2	0.5	2	23	629	650	628	650	0.96
10	15	1e-05	0.001	21.4	0.4	1	23	656	678	656	678	0.96
11	15	0.0033	0.34	13.5	2.3	1	23	684	706	684	706	0.98
12	15	2.9e-05	0.0029	19.9	0.4	2	23	714	735	714	735	0.96
13	15	5.4e-06	0.00055	22.2	4.9	1	23	741	763	741	763	0.99
14	15	7.9e-06	0.0008	21.7	1.2	1	23	769	791	769	791	0.98
15	15	0.0035	0.35	13.4	0.1	1	22	797	818	797	821	0.92

Sequence Information

Coding Sequence: ATGAGTAACGCTCAAGAATATATAGTGTACGGATACTCACTTGGAAATCCAGTTTTCGAAATAAAGCCTGACATAGGTCAGCCAAATTCCACTTTTGTCCCTAACATAATTCAAGTAATACCGGCTAGAACAACACCAGCTATTCGTATTATCGAAAATATTCAGATCTGCAATCCCGCTCAGCAGCTTCAAGTTGCGTGCGATGTTTCCCCGTCCTGCTTCGTAACACAGTCAGACTCAATCCCATCAGTTAGCGAACAAGTAACGCCAAACGCAGATTCTATCAGTACCACAAGTGATGCACCCGTCGCCATTGAAATAATCTCATCACTGGTTGAAACCAAATCTGATTCAACCGATCATGACCCGAAAACAATTTCTCATGATAAATTAAATGTTGATAAGAAAACACGCCCAAAATCCAAATTGAAAAAACCAGTGGCAAAATCTCAACAAATTACTAAACTAAAACCTCCAACGCCTCCACCTGCCACCGTCACCACAGGCAAAACCATATTATTCAAACCGAGGAAAGACTTCCTTTACGAATGCGACATCTGTGACAGTCAGTTTCTATCGCCTGTCTCGCTGAGGCTTCACAAAACTGGCCATCGCTATGGTGCTCCCGAAGAGAAGAAAACCTACAGCTGTCGTTTCTGTGGCCGTCAGTTTTCCCACCTACAGACGCTGGGGGACCACGAGAAAGTACACATCGACGATCCATACGATTGTGGCACCTGCGGTGCACGGTACAGTTCGAAAAGTGGCCTCCGGAACCACTTGTCCAAGAATAGCAAGTGTAATGTTGCCTTCCAGAGCGCGAAACTGCAGAAGAAAAAGCAGGATGAAGAACAGAAGGACCATGGTTGTGATATCTGCGGGAAAACGTACCGACATCGGAAGTCGATGCTCGAGCATCGCAGTTTGCATTTCAGAAACAAACAACACCGATGTGACCGGTGTGGGGTGATGTTCGAGACTACTGGCGGTTGGCGGAAACATAGGGCAAATCAAAGGTGTGAGTTTTCGAAGCGGAAATTCAAGGATCCAGGCGGAGGCGATGAATTGTTCATCCCCGAAGAAAGAAAGAAATTTTTGGAACAGGTAAAGCAACTGGAGGGAGAAAGTGGTGCTGGGTTTTCAGCTGGTCGAAAGACGGAACAAAAACGAAAATCGAGAGAACGTAGCAGAAGTAATAGCAGTGAAAATAGCCAATTCAGTAATATCAGTAACGGTCACAGCGAAAACACATCATTTGAAATAGAAGACGAATCGAAAGCATCACAAGatagaaaattagaaatttcCCCACAGCCATTAATTGAATTGGTGACCATACCGGATACCTCGACAGGCTCGAAAGATATCAATGCTATTGACGAACCAGAAATTTCCCTTGAGTCAATTAAGCAACCGGAAGAAATTAAGTACGAAATTACTAGCGACCAAGAAACGGAGAAAATTGACACCAAAGAAAGTCTCAAAGATGATGAGGGAAACAATGATAATAAAATTAGGCAGGAAGTGGATGTTGATCAATCAGAAGATGATCTCGTTATACCTTTACCTGCCAAAAAAGCAGTCGGGAGAAACGATCCCAAAGAACCTGTCCCTAGAAAACCTCGGAAACCCAAAGAACACAAATGTCCAACCTGTGACAAAACATTCGCTCGGGGATTCATCCTTAAGAATCACCTGCGGAAACACACCGGAGAGCGACCCTTTTTATGTGACAGCTGTCCGAAGTCGTTCGGGGATGCGGCTTCGCTGAAAATGCACTCCGTCATACACACGGGCGAAAAGCCATTCCCCTGTTCCGAGTGTCCTGCGAGATTTGCTCGCAAAAGTGGTCTGCGCAACCACATCACCATACATTTTAATCTTCCCTGTGATGAATGCGACCAGAAGTTTCCTTCTCGGAAAACTCTAGTGCGGCACAAAATCAAACATCAAGGTGTGCGACCTTTCCTGTGCGAAATATGTTCCAAAGATTTTCGAACGAAAGCGGACATGACAGCGCACATGCGAATTCATTCGAACGAAAAGCGATACGTTTGCAAAATATGCTCTGCTCGGTTCAACTGCCCATCGACACTGCGTAGGCATCGCAACGTTCATGCTCCACCGGAAACCCGACCGGTTTGCGAGAGCTGTGGAAAATCATTTTCATCGCGGCAAGCTCTTCAGAAGCACGAGAACATTCACAAGAATCTGAAACCCTTCCAGTGCGAAATATGTTCCAAGTGTTTCCGAGTGAACGATCATCTGAAGGTTCATCTGCGGTCACACTATGGCGAAAAACCTTTCTCGTGTGATTTGTGCCAAAAAAGATTTGTGACGAACGGGGATCTGCGAGTTCATTACCGGCGGCATACCGGTGAAAAGCCTTATACTTGTGATGAGTGTGGTCAAGGATTCGTAGTGACGGCCGGACTCTACCGGCATCAGAATGAAACGGGTCACGAAAATAGCAAACCTACGGCCATTATTGTGCCGGAATACACGAGAGCTACGTAG
Protein Sequence: MSNAQEYIVYGYSLGNPVFEIKPDIGQPNSTFVPNIIQVIPARTTPAIRIIENIQICNPAQQLQVACDVSPSCFVTQSDSIPSVSEQVTPNADSISTTSDAPVAIEIISSLVETKSDSTDHDPKTISHDKLNVDKKTRPKSKLKKPVAKSQQITKLKPPTPPPATVTTGKTILFKPRKDFLYECDICDSQFLSPVSLRLHKTGHRYGAPEEKKTYSCRFCGRQFSHLQTLGDHEKVHIDDPYDCGTCGARYSSKSGLRNHLSKNSKCNVAFQSAKLQKKKQDEEQKDHGCDICGKTYRHRKSMLEHRSLHFRNKQHRCDRCGVMFETTGGWRKHRANQRCEFSKRKFKDPGGGDELFIPEERKKFLEQVKQLEGESGAGFSAGRKTEQKRKSRERSRSNSSENSQFSNISNGHSENTSFEIEDESKASQDRKLEISPQPLIELVTIPDTSTGSKDINAIDEPEISLESIKQPEEIKYEITSDQETEKIDTKESLKDDEGNNDNKIRQEVDVDQSEDDLVIPLPAKKAVGRNDPKEPVPRKPRKPKEHKCPTCDKTFARGFILKNHLRKHTGERPFLCDSCPKSFGDAASLKMHSVIHTGEKPFPCSECPARFARKSGLRNHITIHFNLPCDECDQKFPSRKTLVRHKIKHQGVRPFLCEICSKDFRTKADMTAHMRIHSNEKRYVCKICSARFNCPSTLRRHRNVHAPPETRPVCESCGKSFSSRQALQKHENIHKNLKPFQCEICSKCFRVNDHLKVHLRSHYGEKPFSCDLCQKRFVTNGDLRVHYRRHTGEKPYTCDECGQGFVVTAGLYRHQNETGHENSKPTAIIVPEYTRAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -