Tyan038251.1
Basic Information
- Insect
- Topomyia yanbarensis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_030247195.1
- Location
- CM058069.1:398091203-398095753[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3 3.8e+04 -3.1 0.2 33 43 200 210 200 212 0.88 2 2 2.6e-13 1.3e-09 40.0 0.1 3 44 639 680 637 682 0.95
Sequence Information
- Coding Sequence
- atggtCTCGCTTGGACCGAAAAAGGACGGCGGTCCGAATGCCGAGTTTTTTACGTCGCCGGAATCGCTTCAGGGCTTTGAAACGGTGCGACAATGGCTgcagaaaaactgcaaaaagTACATTGCGCAAGATCCACCTACTAAGGAATCGCTGGCACATTTAATAGTCCAATTTGTCCAGTATCAGGAAACTAAATTGGGAAAAAATTCGCAGGAACCTCCGACGACTCGTTTACCGATGCGATGTTTCATGGATTTTAAGCCGGGAGGTTCGCTGTGTCACATTCTGGCCACCATGTACCGGTACAAGTCGGAGCAACGCTGGCGTAAATTCGATTTCACCGTAAACAAGAACCCAATGCGAAAGGATCCCGTCATACAGATGCTGTTGGACATGGAGACGGCACTGATCGAAGCCGAATGCATGCGGCTACCGATCGTGTACATTCGTCCGGAAGTGGACAAGACTACGGCGAATCGGATTACCGATATCGTTACCTGCCACCAGGGTGAGATGACGCCGGATGAGGAAGAAGCGACACATATTGTATACCCAGCGGTGGATCCGTTTCCAGAGGACTACGCTCGACCGACGTTCCGTCGCGATAAACACGTTATGATTCATTGGTACTACTTTCCCGAGTCGTACGACACATGGGTGCCGAATACTTTTGATCTACCGGACAACATTCCTGACTGTCCACAATCGCCGGGTGATCGTTGGCGTGTTTCGACATCATGGGTTACCGATCTAGAAGAATACAACGAATGGATGGCAGAAGAGGATTACGAAGTTGATGAGGCTGGTCGTAAGAAAGTTCATAAACATCGCTTGGGAGTGGAAGATCTGATGGCTGGTGGTCCCGATGACAAAATTAAAAAGTCCAAAGTTGTCCATCAGAAGCGTAAACGTTCACCTTCTCCGCTAGCCAAGAGTAGCAAAAGGAAAAGTGGTCGCTCACCGGCCGTTTTTCAGAAGAAACCTCGTGCAGACGATGAAGAATCGGAAGATATGACAAAGGATATGGATGATCCACCGGCGGAAACTAACCTGACAGAGGTTAAGGCGGGCTCAAGTAACTCTGCATCCGGGCCAGCAACTCCACAGCCAAAAAGGGATCCCGAGATGCTACCGCTGAAGTATGCAACCATGACGGATTTGGATGACGATATTGATCGGGCCAATGCCGAACGTGGTGGTGATGATAGCCAGGCAGGAAAGACGAGCGACAACAGCAATACTCAAGAGTTCCCTCATGGCAAAGATGATCTAGAAGACAACGTTACCGAACAAACCCATCATATTATTGTGCCCTCGTATTCCGCTTGGTTCGATTACAACTCAATTCACGTTGTAGAAAAGCGAGCTCTGCCGGAGTTCTTCAATGGAAAAAATAAGTCCAAAACACCGGAAATCTTTCTAGCTTACCGTAATTTCATGATCGACACTTATCGATTAAATCCTACGGAATATCTCACAAGTACTGCATGTCGTCGGAACCTGGCCGGAGACGTATGCGCGATTATGCGAGTGCACGCTTTTCTCGAACAGTGGGGTCTTATCAACTATCAAATCGATGCTGATTCACGTCCGACACCAATGGGACCTCCACCGACATCGCACTTCCACGTTCTAAGTGACACTCCATCGGGCCTTCAACCGCTGAATCCACCCAAAACGGCACAGCCCTCAGCAGCTAAAAATTTGCTTGATCTGGACAAGAAACTCGACAAGAAAGAAGATTCTCCAGCATCTGTGACGGCTCCTTCGTCTGTAGCGGGTATTTTGGATCCCATCAAGTCCGAACCAGGTACGATTGGAGCAGATCCGAGCGGACAATTCGGTCTAAGATTGGACCAGTACGCCAAAAAACCTTCGGCTATGCGCCACAAGACCGCTGCCAGCATGTCACGTGATTGGAACGATCAAGAGACACTTCTGCTGCTGGAAGGATTGGAAATGTACAAGGATGATTGGAACAAAGTGTGCGAGCATGTCGGATCACGCACCCAGGATGAGTGCATACTGCACTTCCTTAGACTTCCGATCGAAGATCCTTACTTGGAAGATGACAGCACCTATTTGGGACCTTTGTCCTATCAGCCGATTCCTTTCAGCAAGGCTGGAAATCCAATCATGTCAACAGTGGCTTTTCTGGCGTCCGTTGTGGATCCTAGGATTGCGGCTAGTGCAGCCAAGGCGGCCATGGAAGAATTTGCCGCTATTAAGGACGAAGTTCCTGCTTCGATGTTAGACGCTCATCTAAAAAATGTGGAGAAATCCAACTTTGGCGGAAAATTTGATCCGTACGCTGGTCTGGCAACTAGTGGAATTGCCGGAACTGAATCGGACAAGGACAAGGAAGAAGAGGACAGTAAAGCTACGGGTACTCCAGGTGGACCCGCATCAGGCACTGGAGCTCCACCTACACCCGGTTCGGTCGATATTGAAATGAAGGATCTCTCCAAAAAGGATGAAGACAAAGTTAAAGAAAACGGTAAATCGGAAGATAAACCGTCTCCGTCTGACGAAGTTACTAAAGATTCTGATTCTGTGGCTGCGGCAGGAAGTGACCATGCGAAGGCAACGGATGGCTCTGAAATCGACAAAAGCAAGGATAATCAAGTTTCCATGGAGCTGGCAAAAGAAAACGGCGATCCGAAAGTATTCAACGAAGGAAATCTTCAATCGGCCGCTGCTGCTGCCCTGGCAGCGGCTGCTGTCAAAGCAAAACACTTGGCAGCTGTCGAGGAgagaaaaattaaaagtctggtTGCATTGCTCGTTGAGACCCAGatgaaaaaattagaaattaagCTGCGACATTTTGAAGAGCTGGAAACAACGATGGAACGTGAGCGCGAAGGATTAGAGTATCAAAGGCAACAATTGATCCAAGAACGGCAACAGTTCCATCTGGAACAGTTGAAGGCAGCAGAATTCCGCGCTCGTCAGCAAGCACATCAGCGTTTCCAGTTGGAGCAAGGCCAGTGGCAGCAACCCCCATTAGGTGGAGCTGCTGGAGTTCCGCCATCCGGTGGTCTACCTCCCGCACAGCAATCAGCACCCGCACTCCCACAAGGACCACTTGGACCAAGTCAGGGCCCATTGCCAACCCCTGGATCTAACCCTCAACAGCCGCCATCAATGCCATCTTCCGGTGGACATCCTGGGGTACCAATTccgagcagcagcagcagcactcCCAACAGCAACGGACTTATTTCAGTTCCCCCTACTACGATGTCTACCGACGGTCCTTCTCCAAATAACATCATGCCCCCAACAGTGTCTGGGCAACCACTTTCTTCGCAACTGCCGCAGGGTCCTCTACCACCCCAGCATCAACAACTCCCACCCCATCCCGGGCATCAATCTGGCATGCCAATGCCTGGCTCTCACCACCAGCCTCCCAATCCCCATCATCCTCCACTGCCttctcagcagcagcagcaaccacCGCTGCCCCCACAGCAGGCTCCACTTCCACCAACGCAAGGTCCACTGCCCCCGGTCGGATCAGGAGGCGCACCAATGCCAGGACCCCCACAAGGTCCCCCAGGGCAAGTACCACAACCCGTTGGCAGCGGACCTATTCCTCCATCTACAACATAA
- Protein Sequence
- MVSLGPKKDGGPNAEFFTSPESLQGFETVRQWLQKNCKKYIAQDPPTKESLAHLIVQFVQYQETKLGKNSQEPPTTRLPMRCFMDFKPGGSLCHILATMYRYKSEQRWRKFDFTVNKNPMRKDPVIQMLLDMETALIEAECMRLPIVYIRPEVDKTTANRITDIVTCHQGEMTPDEEEATHIVYPAVDPFPEDYARPTFRRDKHVMIHWYYFPESYDTWVPNTFDLPDNIPDCPQSPGDRWRVSTSWVTDLEEYNEWMAEEDYEVDEAGRKKVHKHRLGVEDLMAGGPDDKIKKSKVVHQKRKRSPSPLAKSSKRKSGRSPAVFQKKPRADDEESEDMTKDMDDPPAETNLTEVKAGSSNSASGPATPQPKRDPEMLPLKYATMTDLDDDIDRANAERGGDDSQAGKTSDNSNTQEFPHGKDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVVEKRALPEFFNGKNKSKTPEIFLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPLNPPKTAQPSAAKNLLDLDKKLDKKEDSPASVTAPSSVAGILDPIKSEPGTIGADPSGQFGLRLDQYAKKPSAMRHKTAASMSRDWNDQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDSTYLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPASMLDAHLKNVEKSNFGGKFDPYAGLATSGIAGTESDKDKEEEDSKATGTPGGPASGTGAPPTPGSVDIEMKDLSKKDEDKVKENGKSEDKPSPSDEVTKDSDSVAAAGSDHAKATDGSEIDKSKDNQVSMELAKENGDPKVFNEGNLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQLEQGQWQQPPLGGAAGVPPSGGLPPAQQSAPALPQGPLGPSQGPLPTPGSNPQQPPSMPSSGGHPGVPIPSSSSSTPNSNGLISVPPTTMSTDGPSPNNIMPPTVSGQPLSSQLPQGPLPPQHQQLPPHPGHQSGMPMPGSHHQPPNPHHPPLPSQQQQQPPLPPQQAPLPPTQGPLPPVGSGGAPMPGPPQGPPGQVPQPVGSGPIPPSTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471362;
- 90% Identity
- iTF_00948685;
- 80% Identity
- -